RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 ZNF626Q68DY1 528 aa12.34□□□□□ -0.43
ERCC3-205ENST00000460485 SFRP4Q6FHJ7 346 aaPredicted RBP12.34□□□□□ -0.43
ERCC3-205ENST00000460485 Q6ZTK2 550 aa12.34□□□□□ -0.43
ERCC3-205ENST00000460485 CHMP1BQ7LBR1 199 aa12.34□□□□□ -0.43
ERCC3-205ENST00000460485 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.34□□□□□ -0.43
ERCC3-205ENST00000460485 ZNF101Q8IZC7 436 aa12.34□□□□□ -0.43
ERCC3-205ENST00000460485 TMEM251Q8N6I4 163 aa12.34□□□□□ -0.43
ERCC3-205ENST00000460485 SEMA6DQ8NFY4 1073 aa12.34□□□□□ -0.43
ERCC3-205ENST00000460485 FBXO17Q96EF6 278 aa12.34□□□□□ -0.43
ERCC3-205ENST00000460485 DMRTB1Q96MA1 342 aa12.34□□□□□ -0.43
ERCC3-205ENST00000460485 GPER1Q99527 375 aa12.34□□□□□ -0.43
ERCC3-205ENST00000460485 S100A13Q99584 98 aa12.34□□□□□ -0.43
ERCC3-205ENST00000460485 GINS4Q9BRT9 223 aa12.34□□□□□ -0.43
ERCC3-205ENST00000460485 OR2H1Q9GZK4 316 aa12.34□□□□□ -0.43
ERCC3-205ENST00000460485 PRDM14Q9GZV8 571 aa12.34□□□□□ -0.43
ERCC3-205ENST00000460485 PCDHB16Q9NRJ7 776 aa12.34□□□□□ -0.43
ERCC3-205ENST00000460485 NBASA2RRP1 2371 aa12.33□□□□□ -0.44
ERCC3-205ENST00000460485 ARHGAP21Q5T5U3 1957 aa12.33□□□□□ -0.44
ERCC3-205ENST00000460485 LMX1BO60663 402 aa12.33□□□□□ -0.44
ERCC3-205ENST00000460485 ZNF780AO75290 641 aaPredicted RBP12.33□□□□□ -0.44
ERCC3-205ENST00000460485 ATP6V1G1O75348 118 aa12.33□□□□□ -0.44
ERCC3-205ENST00000460485 GIPP09681 153 aaPredicted RBP12.33□□□□□ -0.44
ERCC3-205ENST00000460485 NAT2P11245 290 aa12.33□□□□□ -0.44
ERCC3-205ENST00000460485 VEGFCP49767 419 aa12.33□□□□□ -0.44
ERCC3-205ENST00000460485 UNC119Q13432 240 aa12.33□□□□□ -0.44
ERCC3-205ENST00000460485 GK2Q14410 553 aaPredicted RBP12.33□□□□□ -0.44
ERCC3-205ENST00000460485 SLC10A1Q14973 349 aa12.33□□□□□ -0.44
ERCC3-205ENST00000460485 GLIPR1L1Q6UWM5 242 aa12.33□□□□□ -0.44
ERCC3-205ENST00000460485 NAA40Q86UY6 237 aa12.33□□□□□ -0.44
ERCC3-205ENST00000460485 ANGPTL5Q86XS5 388 aa12.33□□□□□ -0.44
ERCC3-205ENST00000460485 MCEMP1Q8IX19 187 aa12.33□□□□□ -0.44
ERCC3-205ENST00000460485 LRRC18Q8N456 261 aa12.33□□□□□ -0.44
ERCC3-205ENST00000460485 ROBO4Q8WZ75 1007 aa12.33□□□□□ -0.44
ERCC3-205ENST00000460485 EXTL1Q92935 676 aa12.33□□□□□ -0.44
ERCC3-205ENST00000460485 GCDHQ92947 438 aaPredicted RBP12.33□□□□□ -0.44
ERCC3-205ENST00000460485 ALKBH3Q96Q83 286 aaPredicted RBP12.33□□□□□ -0.44
ERCC3-205ENST00000460485 PRRG4Q9BZD6 226 aa12.33□□□□□ -0.44
ERCC3-205ENST00000460485 TP63Q9H3D4 680 aaPredicted RBP12.33□□□□□ -0.44
ERCC3-205ENST00000460485 GLRX2Q9NS18 164 aa12.33□□□□□ -0.44
ERCC3-205ENST00000460485 ANAPC10Q9UM13 185 aa12.33□□□□□ -0.44
ERCC3-205ENST00000460485 A8MV72 311 aaPredicted RBP12.32□□□□□ -0.44
ERCC3-205ENST00000460485 CDC14BO60729 498 aa12.32□□□□□ -0.44
ERCC3-205ENST00000460485 RGS11O94810 467 aa12.32□□□□□ -0.44
ERCC3-205ENST00000460485 SERPINA5P05154 406 aa12.32□□□□□ -0.44
ERCC3-205ENST00000460485 SLC2A1P11166 492 aa12.32□□□□□ -0.44
ERCC3-205ENST00000460485 ABOP16442 354 aa12.32□□□□□ -0.44
ERCC3-205ENST00000460485 ZNF32P17041 273 aa12.32□□□□□ -0.44
ERCC3-205ENST00000460485 ARR3P36575 388 aa12.32□□□□□ -0.44
ERCC3-205ENST00000460485 MAGEA5P43359 124 aa12.32□□□□□ -0.44
ERCC3-205ENST00000460485 HTR5AP47898 357 aa12.32□□□□□ -0.44
ERCC3-205ENST00000460485 STARP49675 285 aa12.32□□□□□ -0.44
ERCC3-205ENST00000460485 RAP2BP61225 183 aa12.32□□□□□ -0.44
ERCC3-205ENST00000460485 PPIAP62937 165 aaKnown RBP12.32□□□□□ -0.44
ERCC3-205ENST00000460485 ARG2P78540 354 aa12.32□□□□□ -0.44
ERCC3-205ENST00000460485 PLA2G7Q13093 441 aa12.32□□□□□ -0.44
ERCC3-205ENST00000460485 MPPED2Q15777 294 aa12.32□□□□□ -0.44
ERCC3-205ENST00000460485 RNASE10Q5GAN6 216 aaKnown RBP12.32□□□□□ -0.44
ERCC3-205ENST00000460485 FAHD2BQ6P2I3 314 aaPredicted RBP12.32□□□□□ -0.44
ERCC3-205ENST00000460485 MTFR2Q6P444 385 aa12.32□□□□□ -0.44
ERCC3-205ENST00000460485 SEZ6L2Q6UXD5 910 aa12.32□□□□□ -0.44
ERCC3-205ENST00000460485 LINC00696Q6ZRV3 163 aa12.32□□□□□ -0.44
ERCC3-205ENST00000460485 LHFPL2Q6ZUX7 228 aa12.32□□□□□ -0.44
ERCC3-205ENST00000460485 PAQR4Q8N4S7 273 aaPredicted RBP12.32□□□□□ -0.44
ERCC3-205ENST00000460485 APH1AQ96BI3 265 aa12.32□□□□□ -0.44
ERCC3-205ENST00000460485 FAHD2AQ96GK7 314 aa12.32□□□□□ -0.44
ERCC3-205ENST00000460485 TM2D1Q9BX74 207 aa12.32□□□□□ -0.44
ERCC3-205ENST00000460485 ZNF436Q9C0F3 470 aaPredicted RBP12.32□□□□□ -0.44
ERCC3-205ENST00000460485 OR10A4Q9H209 315 aa12.32□□□□□ -0.44
ERCC3-205ENST00000460485 IFT46Q9NQC8 304 aa12.32□□□□□ -0.44
ERCC3-205ENST00000460485 MRPL15Q9P015 296 aaKnown RBP12.32□□□□□ -0.44
ERCC3-205ENST00000460485 ZNF222Q9UK12 451 aa12.32□□□□□ -0.44
ERCC3-205ENST00000460485 CNTRLQ7Z7A1 2325 aa12.32□□□□□ -0.44
ERCC3-205ENST00000460485 SPTBN1Q01082 2364 aaKnown RBP12.32□□□□□ -0.44
ERCC3-205ENST00000460485 MED13Q9UHV7 2174 aa12.31□□□□□ -0.44
ERCC3-205ENST00000460485 SERPINE3A8MV23 424 aa12.31□□□□□ -0.44
ERCC3-205ENST00000460485 J3QW42 95 aa12.31□□□□□ -0.44
ERCC3-205ENST00000460485 B4GALT1P15291 398 aa12.31□□□□□ -0.44
ERCC3-205ENST00000460485 NAT1P18440 290 aa12.31□□□□□ -0.44
ERCC3-205ENST00000460485 CPT2P23786 658 aa12.31□□□□□ -0.44
ERCC3-205ENST00000460485 PTGFRP43088 359 aa12.31□□□□□ -0.44
ERCC3-205ENST00000460485 NKX2-5P52952 324 aaPredicted RBP12.31□□□□□ -0.44
ERCC3-205ENST00000460485 GNG2P59768 71 aa12.31□□□□□ -0.44
ERCC3-205ENST00000460485 UBE2MP61081 183 aaKnown RBP12.31□□□□□ -0.44
ERCC3-205ENST00000460485 RPS27AP62979 156 aaKnown RBP12.31□□□□□ -0.44
ERCC3-205ENST00000460485 KISS1Q15726 138 aa12.31□□□□□ -0.44
ERCC3-205ENST00000460485 ZNF766Q5HY98 468 aa12.31□□□□□ -0.44
ERCC3-205ENST00000460485 CLVS2Q5SYC1 327 aa12.31□□□□□ -0.44
ERCC3-205ENST00000460485 LPCAT3Q6P1A2 487 aa12.31□□□□□ -0.44
ERCC3-205ENST00000460485 TMEM53Q6P2H8 277 aa12.31□□□□□ -0.44
ERCC3-205ENST00000460485 ZNF767PQ75MW2 155 aa12.31□□□□□ -0.44
ERCC3-205ENST00000460485 GALNTL5Q7Z4T8 443 aa12.31□□□□□ -0.44
ERCC3-205ENST00000460485 BIVMQ86UB2 503 aa12.31□□□□□ -0.44
ERCC3-205ENST00000460485 FAM89BQ8N5H3 189 aa12.31□□□□□ -0.44
ERCC3-205ENST00000460485 ZDHHC22Q8N966 263 aa12.31□□□□□ -0.44
ERCC3-205ENST00000460485 ACBD4Q8NC06 268 aa12.31□□□□□ -0.44
ERCC3-205ENST00000460485 OR11H7Q8NGC8 314 aa12.31□□□□□ -0.44
ERCC3-205ENST00000460485 ABHD3Q8WU67 409 aa12.31□□□□□ -0.44
ERCC3-205ENST00000460485 NANOS1Q8WY41 292 aaKnown RBP12.31□□□□□ -0.44
ERCC3-205ENST00000460485 SPSB4Q96A44 273 aa12.31□□□□□ -0.44
ERCC3-205ENST00000460485 RAB3CQ96E17 227 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms