RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 AKR7LQ8NHP1 331 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 IL1F10Q8WWZ1 152 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 TNFRSF14Q92956 283 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 ISG20Q96AZ6 181 aaKnown RBP3.31□□□□□ -1.88
HMGB3-203ENST00000430118 FBXO17Q96EF6 278 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 RDH12Q96NR8 316 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 TRNT1Q96Q11 434 aaKnown RBP3.31□□□□□ -1.88
HMGB3-203ENST00000430118 NPY6RQ99463 290 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 LITAFQ99732 161 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 ATF6BQ99941 703 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 TTYH2Q9BSA4 534 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 TMED9Q9BVK6 235 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 TM6SF2Q9BZW4 377 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 DERL2Q9GZP9 239 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 CCDC90BQ9GZT6 254 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 OPN3Q9H1Y3 402 aaPredicted RBP3.31□□□□□ -1.88
HMGB3-203ENST00000430118 MIXL1Q9H2W2 232 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 GAL3ST2Q9H3Q3 398 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 AMBNQ9NP70 447 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 ESM1Q9NQ30 184 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 FBXO6Q9NRD1 293 aaPredicted RBP3.31□□□□□ -1.88
HMGB3-203ENST00000430118 DDIT4Q9NX09 232 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 MLXQ9UH92 298 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 PHF11Q9UIL8 331 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 ABCG2Q9UNQ0 655 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 V9GYQ6 96 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 KIF26BQ2KJY2 2108 aa3.31□□□□□ -1.88
HMGB3-203ENST00000430118 TDRD6O60522 2096 aaKnown RBP3.31□□□□□ -1.88
HMGB3-203ENST00000430118 HIVEP1P15822 2718 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 RP1P56715 2156 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 IGLV4-3A0A075B6K6 122 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 IGHV3OR16-12A0A075B7B8 117 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 TRGV8A0A0C4DH27 118 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 A0A1B0GV90 55 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 GNG14A0A1W2PPG7 69 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 IQCF5A8MTL0 148 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 C9J4A7 227 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 M0QZK8 103 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 M0R3G1 203 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 NR5A2O00482 541 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 CASKO14936 926 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 ZNF264O43296 627 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 ZNF749O43361 778 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 MED7O43513 233 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 PSTPIP1O43586 416 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 FCMRO60667 390 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 RHBDL1O75783 438 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 POP7O75817 140 aaKnown RBP3.3□□□□□ -1.88
HMGB3-203ENST00000430118 EIF3GO75821 320 aaKnown RBP eCLIP3.3□□□□□ -1.88
HMGB3-203ENST00000430118 JCHAINP01591 159 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 HSD17B1P14061 328 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 KLK2P20151 261 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 OGNP20774 298 aaKnown RBP3.3□□□□□ -1.88
HMGB3-203ENST00000430118 PRPS1L1P21108 318 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 CPN2P22792 545 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 RBP2P50120 134 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 MFAP2P55001 183 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 MERTKQ12866 999 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 MAB21L1Q13394 359 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 SLC1A5Q15758 541 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 GUCA2BQ16661 112 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 PTPN20Q4JDL3 420 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 TMEM52BQ4KMG9 183 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 PAN3Q58A45 887 aaKnown RBP3.3□□□□□ -1.88
HMGB3-203ENST00000430118 PIGGQ5H8A4 983 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 OR2B11Q5JQS5 317 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 PHYHD1Q5SRE7 291 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 MLIPQ5VWP3 458 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 REP15Q6BDI9 236 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 XAF1Q6GPH4 301 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 FBXL22Q6P050 247 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 FAHD2BQ6P2I3 314 aaPredicted RBP3.3□□□□□ -1.88
HMGB3-203ENST00000430118 IGFL3Q6UXB1 125 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 APOOLQ6UXV4 268 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 ARCQ7LC44 396 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 DCXRQ7Z4W1 244 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 DPPA2Q7Z7J5 298 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 TMEM135Q86UB9 458 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 C17orf82Q86X59 251 aaPredicted RBP3.3□□□□□ -1.88
HMGB3-203ENST00000430118 RNF130Q86XS8 419 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 PHF13Q86YI8 300 aaPredicted RBP3.3□□□□□ -1.88
HMGB3-203ENST00000430118 TGIF2LYQ8IUE0 185 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 CCDC71Q8IV32 467 aaPredicted RBP3.3□□□□□ -1.88
HMGB3-203ENST00000430118 PSTKQ8IV42 348 aaKnown RBP3.3□□□□□ -1.88
HMGB3-203ENST00000430118 RDH10Q8IZV5 341 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 PGAM4Q8N0Y7 254 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 ZNF786Q8N393 782 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 C9orf62Q8N4C0 152 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 DHRSXQ8N5I4 330 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 C12orf45Q8N5I9 185 aaPredicted RBP3.3□□□□□ -1.88
HMGB3-203ENST00000430118 ZNRF1Q8ND25 227 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 FBXL13Q8NEE6 735 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 BPIFB6Q8NFQ5 453 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 OR8J2Q8NGG1 315 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 DTD1Q8TEA8 209 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 CT55Q8WUE5 264 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 NTNG2Q96CW9 530 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 RASD2Q96D21 266 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 ECHDC3Q96DC8 303 aa3.3□□□□□ -1.88
HMGB3-203ENST00000430118 FAHD2AQ96GK7 314 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms