RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 ZBTB49Q6ZSB9 765 aa7.65□□□□□ -1.18
SMC1A-203ENST00000428014 C9orf139Q6ZV77 190 aa7.65□□□□□ -1.18
SMC1A-203ENST00000428014 FAM57BQ71RH2 274 aa7.65□□□□□ -1.18
SMC1A-203ENST00000428014 DOK3Q7L591 496 aa7.65□□□□□ -1.18
SMC1A-203ENST00000428014 MOGAT3Q86VF5 341 aa7.65□□□□□ -1.18
SMC1A-203ENST00000428014 SYS1Q8N2H4 156 aa7.65□□□□□ -1.18
SMC1A-203ENST00000428014 GCSAMQ8N6F7 178 aa7.65□□□□□ -1.18
SMC1A-203ENST00000428014 BHLHE23Q8NDY6 225 aa7.65□□□□□ -1.18
SMC1A-203ENST00000428014 SEMA6DQ8NFY4 1073 aa7.65□□□□□ -1.18
SMC1A-203ENST00000428014 OR1M1Q8NGA1 313 aa7.65□□□□□ -1.18
SMC1A-203ENST00000428014 OR8B12Q8NGG6 310 aa7.65□□□□□ -1.18
SMC1A-203ENST00000428014 OR8B3Q8NGG8 313 aa7.65□□□□□ -1.18
SMC1A-203ENST00000428014 OR8S1Q8NH09 359 aa7.65□□□□□ -1.18
SMC1A-203ENST00000428014 RHOXF1Q8NHV9 184 aa7.65□□□□□ -1.18
SMC1A-203ENST00000428014 NANPQ8TBE9 248 aa7.65□□□□□ -1.18
SMC1A-203ENST00000428014 TMEM158Q8WZ71 300 aa7.65□□□□□ -1.18
SMC1A-203ENST00000428014 OR5P3Q8WZ94 311 aa7.65□□□□□ -1.18
SMC1A-203ENST00000428014 STMN2Q93045 179 aa7.65□□□□□ -1.18
SMC1A-203ENST00000428014 EME1Q96AY2 570 aa7.65□□□□□ -1.18
SMC1A-203ENST00000428014 OR8B2Q96RD0 313 aa7.65□□□□□ -1.18
SMC1A-203ENST00000428014 JMJD8Q96S16 334 aa7.65□□□□□ -1.18
SMC1A-203ENST00000428014 PBOV1Q9GZY1 135 aa7.65□□□□□ -1.18
SMC1A-203ENST00000428014 SEMA6AQ9H2E6 1030 aa7.65□□□□□ -1.18
SMC1A-203ENST00000428014 ZMAT3Q9HA38 289 aaKnown RBP7.65□□□□□ -1.18
SMC1A-203ENST00000428014 RASL12Q9NYN1 266 aa7.65□□□□□ -1.18
SMC1A-203ENST00000428014 ZNF319Q9P2F9 582 aa7.65□□□□□ -1.18
SMC1A-203ENST00000428014 EXOGQ9Y2C4 368 aaKnown RBP7.65□□□□□ -1.18
SMC1A-203ENST00000428014 V9GYS6 101 aa7.65□□□□□ -1.18
SMC1A-203ENST00000428014 KIR2DS1A0A191URI9 304 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 IRGMA1A4Y4 181 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 OOEPA6NGQ2 149 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 METTL15A6NJ78 407 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 KIAA1324LA8MWY0 1029 aaPredicted RBP7.64□□□□□ -1.19
SMC1A-203ENST00000428014 LOC110117498-PIK3R3F6TDL0 507 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 H0YL77 283 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 CASQ2O14958 399 aaPredicted RBP7.64□□□□□ -1.19
SMC1A-203ENST00000428014 TBX1O43435 398 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 FAM20BO75063 409 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 ALX3O95076 343 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 IGHA1P01876 353 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 TTRP02766 147 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 HLA-DPB1P04440 258 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 UBCP0CG48 685 aaKnown RBP7.64□□□□□ -1.19
SMC1A-203ENST00000428014 SLC2A1P11166 492 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 PMELP40967 661 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 GNG3P63215 75 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 RAB40BQ12829 278 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 CDONQ4KMG0 1287 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 SPRNQ5BIV9 151 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 AVPI1Q5T686 147 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 TTC23Q5W5X9 447 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 ZNF841Q6ZN19 808 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 C1orf122Q6ZSJ8 110 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 C11orf53Q8IXP5 236 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 ZDHHC23Q8IYP9 409 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 CBR4Q8N4T8 237 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 ACBD7Q8N6N7 88 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 PP6455Q8WZ26 134 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 HIST1H2AAQ96QV6 131 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 TMEM246Q9BRR3 403 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 PAPOLGQ9BWT3 736 aaKnown RBP7.64□□□□□ -1.19
SMC1A-203ENST00000428014 SSBP3Q9BWW4 388 aaPredicted RBP7.64□□□□□ -1.19
SMC1A-203ENST00000428014 TMPRSS13Q9BYE2 586 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 RHOFQ9HBH0 211 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 SMPD3Q9NY59 655 aaPredicted RBP7.64□□□□□ -1.19
SMC1A-203ENST00000428014 ERVK-18Q9QC07 812 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 OR5V1Q9UGF6 321 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 MRM2Q9UI43 246 aaKnown RBP7.64□□□□□ -1.19
SMC1A-203ENST00000428014 ENPP5Q9UJA9 477 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 COPS3Q9UNS2 423 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 SLC22A13Q9Y226 551 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 KLHDC2Q9Y2U9 406 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 INSIG2Q9Y5U4 225 aa7.64□□□□□ -1.19
SMC1A-203ENST00000428014 SVEP1Q4LDE5 3571 aa7.63□□□□□ -1.19
SMC1A-203ENST00000428014 IGHV2-70DA0A0C4DH43 119 aa7.63□□□□□ -1.19
SMC1A-203ENST00000428014 ISPDA4D126 451 aa7.63□□□□□ -1.19
SMC1A-203ENST00000428014 SAC3D1A6NKF1 404 aa7.63□□□□□ -1.19
SMC1A-203ENST00000428014 ANKRD65E5RJM6 399 aa7.63□□□□□ -1.19
SMC1A-203ENST00000428014 H0YHG0 523 aa7.63□□□□□ -1.19
SMC1A-203ENST00000428014 H0YJX3 145 aa7.63□□□□□ -1.19
SMC1A-203ENST00000428014 ENSAO43768 121 aaKnown RBP7.63□□□□□ -1.19
SMC1A-203ENST00000428014 FADS2O95864 444 aaKnown RBP7.63□□□□□ -1.19
SMC1A-203ENST00000428014 VSIG8P0DPA2 414 aa7.63□□□□□ -1.19
SMC1A-203ENST00000428014 RPS2P15880 293 aaKnown RBP7.63□□□□□ -1.19
SMC1A-203ENST00000428014 ACKR3P25106 362 aa7.63□□□□□ -1.19
SMC1A-203ENST00000428014 MPZP25189 248 aa7.63□□□□□ -1.19
SMC1A-203ENST00000428014 POLR2IP36954 125 aaKnown RBP7.63□□□□□ -1.19
SMC1A-203ENST00000428014 PITPNBP48739 271 aa7.63□□□□□ -1.19
SMC1A-203ENST00000428014 GNB2P62879 340 aa7.63□□□□□ -1.19
SMC1A-203ENST00000428014 MPPED2Q15777 294 aa7.63□□□□□ -1.19
SMC1A-203ENST00000428014 MICBQ29980 383 aa7.63□□□□□ -1.19
SMC1A-203ENST00000428014 KLHL22Q53GT1 634 aa7.63□□□□□ -1.19
SMC1A-203ENST00000428014 CLVS2Q5SYC1 327 aa7.63□□□□□ -1.19
SMC1A-203ENST00000428014 TMEM244Q5VVB8 128 aa7.63□□□□□ -1.19
SMC1A-203ENST00000428014 METAP1DQ6UB28 335 aaPredicted RBP7.63□□□□□ -1.19
SMC1A-203ENST00000428014 BTNL3Q6UXE8 466 aa7.63□□□□□ -1.19
SMC1A-203ENST00000428014 WDR82Q6UXN9 313 aa7.63□□□□□ -1.19
SMC1A-203ENST00000428014 SLC36A1Q7Z2H8 476 aa7.63□□□□□ -1.19
SMC1A-203ENST00000428014 CATSPERDQ86XM0 798 aa7.63□□□□□ -1.19
SMC1A-203ENST00000428014 ZNF573Q86YE8 665 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms