RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 PRR32B1ATL7 298 aa10.78□□□□□ -0.68
VRK3-203ENST00000424804 PHYHO14832 338 aa10.78□□□□□ -0.68
VRK3-203ENST00000424804 GMDSO60547 372 aa10.78□□□□□ -0.68
VRK3-203ENST00000424804 FAM20BO75063 409 aa10.78□□□□□ -0.68
VRK3-203ENST00000424804 RPP14O95059 124 aaKnown RBP10.78□□□□□ -0.68
VRK3-203ENST00000424804 HTR1FP30939 366 aa10.78□□□□□ -0.68
VRK3-203ENST00000424804 DDOSTP39656 456 aa10.78□□□□□ -0.68
VRK3-203ENST00000424804 PSMB10P40306 273 aa10.78□□□□□ -0.68
VRK3-203ENST00000424804 CD200P41217 278 aa10.78□□□□□ -0.68
VRK3-203ENST00000424804 EFNB1P98172 346 aa10.78□□□□□ -0.68
VRK3-203ENST00000424804 ZNF829Q3KNS6 432 aaPredicted RBP10.78□□□□□ -0.68
VRK3-203ENST00000424804 KCTD8Q6ZWB6 473 aa10.78□□□□□ -0.68
VRK3-203ENST00000424804 RHOUQ7L0Q8 258 aa10.78□□□□□ -0.68
VRK3-203ENST00000424804 PRSS45Q7RTY3 260 aa10.78□□□□□ -0.68
VRK3-203ENST00000424804 ZNF679Q8IYX0 411 aa10.78□□□□□ -0.68
VRK3-203ENST00000424804 C1orf87Q8N0U7 546 aa10.78□□□□□ -0.68
VRK3-203ENST00000424804 YIPF7Q8N8F6 280 aa10.78□□□□□ -0.68
VRK3-203ENST00000424804 Q8TCH9 128 aa10.78□□□□□ -0.68
VRK3-203ENST00000424804 PIGCQ92535 297 aa10.78□□□□□ -0.68
VRK3-203ENST00000424804 RFKQ969G6 155 aa10.78□□□□□ -0.68
VRK3-203ENST00000424804 SPSB4Q96A44 273 aa10.78□□□□□ -0.68
VRK3-203ENST00000424804 NEIL1Q96FI4 390 aaPredicted RBP10.78□□□□□ -0.68
VRK3-203ENST00000424804 FAM71F1Q96KD3 344 aaPredicted RBP10.78□□□□□ -0.68
VRK3-203ENST00000424804 SLC29A1Q99808 456 aa10.78□□□□□ -0.68
VRK3-203ENST00000424804 PPP1R3EQ9H7J1 279 aa10.78□□□□□ -0.68
VRK3-203ENST00000424804 ZMAT3Q9HA38 289 aaKnown RBP10.78□□□□□ -0.68
VRK3-203ENST00000424804 FN3KRPQ9HA64 309 aa10.78□□□□□ -0.68
VRK3-203ENST00000424804 C1orf123Q9NWV4 160 aa10.78□□□□□ -0.68
VRK3-203ENST00000424804 CLN6Q9NWW5 311 aa10.78□□□□□ -0.68
VRK3-203ENST00000424804 AASSQ9UDR5 926 aa10.78□□□□□ -0.68
VRK3-203ENST00000424804 OR5V1Q9UGF6 321 aa10.78□□□□□ -0.68
VRK3-203ENST00000424804 WARS2Q9UGM6 360 aaKnown RBP10.78□□□□□ -0.68
VRK3-203ENST00000424804 ZNF850A8MQ14 1090 aa10.77□□□□□ -0.69
VRK3-203ENST00000424804 C22orf46C9J442 243 aa10.77□□□□□ -0.69
VRK3-203ENST00000424804 LOC110117498-PIK3R3F6TDL0 507 aa10.77□□□□□ -0.69
VRK3-203ENST00000424804 PTBP3O95758 552 aaKnown RBP10.77□□□□□ -0.69
VRK3-203ENST00000424804 RPS2P15880 293 aaKnown RBP10.77□□□□□ -0.69
VRK3-203ENST00000424804 MFGE8Q08431 387 aaPredicted RBP10.77□□□□□ -0.69
VRK3-203ENST00000424804 MZT1Q08AG7 82 aa10.77□□□□□ -0.69
VRK3-203ENST00000424804 LRRC36Q1X8D7 754 aa10.77□□□□□ -0.69
VRK3-203ENST00000424804 ODF4Q2M2E3 257 aa10.77□□□□□ -0.69
VRK3-203ENST00000424804 DEFB112Q30KQ8 113 aa10.77□□□□□ -0.69
VRK3-203ENST00000424804 WDR25Q64LD2 544 aaPredicted RBP10.77□□□□□ -0.69
VRK3-203ENST00000424804 SFRP4Q6FHJ7 346 aaPredicted RBP10.77□□□□□ -0.69
VRK3-203ENST00000424804 RBMS3Q6XE24 437 aaKnown RBP10.77□□□□□ -0.69
VRK3-203ENST00000424804 ZNF826PQ6ZT77 177 aa10.77□□□□□ -0.69
VRK3-203ENST00000424804 FTMTQ8N4E7 242 aa10.77□□□□□ -0.69
VRK3-203ENST00000424804 CELF2-AS1Q8N7Q2 184 aa10.77□□□□□ -0.69
VRK3-203ENST00000424804 CSNK2A3Q8NEV1 391 aa10.77□□□□□ -0.69
VRK3-203ENST00000424804 PPP1R14AQ96A00 147 aa10.77□□□□□ -0.69
VRK3-203ENST00000424804 MBOAT4Q96T53 435 aa10.77□□□□□ -0.69
VRK3-203ENST00000424804 MS4A7Q9GZW8 240 aaPredicted RBP10.77□□□□□ -0.69
VRK3-203ENST00000424804 PBOV1Q9GZY1 135 aa10.77□□□□□ -0.69
VRK3-203ENST00000424804 RGCCQ9H4X1 137 aa10.77□□□□□ -0.69
VRK3-203ENST00000424804 C14orf119Q9NWQ9 140 aa10.77□□□□□ -0.69
VRK3-203ENST00000424804 CTSZQ9UBR2 303 aa10.77□□□□□ -0.69
VRK3-203ENST00000424804 RHBDD3Q9Y3P4 386 aa10.77□□□□□ -0.69
VRK3-203ENST00000424804 NOTCH1P46531 2555 aa10.76□□□□□ -0.69
VRK3-203ENST00000424804 ANXA2P2A6NMY6 339 aa10.76□□□□□ -0.69
VRK3-203ENST00000424804 POM121CA8CG34 1229 aa10.76□□□□□ -0.69
VRK3-203ENST00000424804 H3BSH0 61 aa10.76□□□□□ -0.69
VRK3-203ENST00000424804 ENTPD6O75354 484 aa10.76□□□□□ -0.69
VRK3-203ENST00000424804 ZNF254O75437 659 aa10.76□□□□□ -0.69
VRK3-203ENST00000424804 KRT8P05787 483 aa10.76□□□□□ -0.69
VRK3-203ENST00000424804 MMP9P14780 707 aa10.76□□□□□ -0.69
VRK3-203ENST00000424804 MDKP21741 143 aaPredicted RBP10.76□□□□□ -0.69
VRK3-203ENST00000424804 GMFBP60983 142 aa10.76□□□□□ -0.69
VRK3-203ENST00000424804 GNB2P62879 340 aa10.76□□□□□ -0.69
VRK3-203ENST00000424804 RELBQ01201 579 aa10.76□□□□□ -0.69
VRK3-203ENST00000424804 POU4F2Q12837 409 aa10.76□□□□□ -0.69
VRK3-203ENST00000424804 PRDX4Q13162 271 aa10.76□□□□□ -0.69
VRK3-203ENST00000424804 OR8B8Q15620 311 aa10.76□□□□□ -0.69
VRK3-203ENST00000424804 ZSCAN26Q16670 478 aa10.76□□□□□ -0.69
VRK3-203ENST00000424804 BCL2L15Q5TBC7 163 aa10.76□□□□□ -0.69
VRK3-203ENST00000424804 C16orf87Q6PH81 154 aa10.76□□□□□ -0.69
VRK3-203ENST00000424804 DEGS2Q6QHC5 323 aa10.76□□□□□ -0.69
VRK3-203ENST00000424804 SSX6Q7RTT6 188 aa10.76□□□□□ -0.69
VRK3-203ENST00000424804 THAP5Q7Z6K1 395 aa10.76□□□□□ -0.69
VRK3-203ENST00000424804 GALNT4Q8N4A0 578 aa10.76□□□□□ -0.69
VRK3-203ENST00000424804 SPERTQ8NA61 448 aa10.76□□□□□ -0.69
VRK3-203ENST00000424804 OR51E1Q8TCB6 317 aa10.76□□□□□ -0.69
VRK3-203ENST00000424804 RNFT2Q96EX2 444 aa10.76□□□□□ -0.69
VRK3-203ENST00000424804 HRASLS5Q96KN8 279 aa10.76□□□□□ -0.69
VRK3-203ENST00000424804 LYZL4Q96KX0 146 aa10.76□□□□□ -0.69
VRK3-203ENST00000424804 HIST1H2AAQ96QV6 131 aa10.76□□□□□ -0.69
VRK3-203ENST00000424804 MNTQ99583 582 aa10.76□□□□□ -0.69
VRK3-203ENST00000424804 MICU1Q9BPX6 476 aa10.76□□□□□ -0.69
VRK3-203ENST00000424804 NUDT16L1Q9BRJ7 211 aaKnown RBP10.76□□□□□ -0.69
VRK3-203ENST00000424804 SLITRK2Q9H156 845 aa10.76□□□□□ -0.69
VRK3-203ENST00000424804 GPR84Q9NQS5 396 aa10.76□□□□□ -0.69
VRK3-203ENST00000424804 FAM206AQ9NX38 181 aa10.76□□□□□ -0.69
VRK3-203ENST00000424804 RNF7Q9UBF6 113 aa10.76□□□□□ -0.69
VRK3-203ENST00000424804 MMP24Q9Y5R2 645 aa10.76□□□□□ -0.69
VRK3-203ENST00000424804 TRAV40A0A0B4J280 105 aa10.75□□□□□ -0.69
VRK3-203ENST00000424804 A0A1W2PQL4 384 aaPredicted RBP10.75□□□□□ -0.69
VRK3-203ENST00000424804 C3orf80F5H4A9 247 aa10.75□□□□□ -0.69
VRK3-203ENST00000424804 OR2T7P0C7T2 308 aa10.75□□□□□ -0.69
VRK3-203ENST00000424804 ACKR3P25106 362 aa10.75□□□□□ -0.69
VRK3-203ENST00000424804 MAP2K3P46734 347 aa10.75□□□□□ -0.69
VRK3-203ENST00000424804 PITPNBP48739 271 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms