RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 C1orf21Q9H246 121 aa1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 IKZF5Q9H5V7 419 aa1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 OPA3Q9H6K4 179 aa1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 LIN7BQ9HAP6 207 aa1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 ELL3Q9HB65 397 aaPredicted RBP1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 SSU72Q9NP77 194 aaKnown RBP1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 KCNK9Q9NPC2 374 aa1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 NRIP3Q9NQ35 241 aa1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZFP57Q9NU63 452 aa1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 THAP1Q9NVV9 213 aa1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 VNN3Q9NY84 501 aa1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 USE1Q9NZ43 259 aa1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 ADA2Q9NZK5 511 aa1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 VSX1Q9NZR4 365 aaPredicted RBP1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 CCDC167Q9P0B6 97 aa1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 NLKQ9UBE8 527 aa1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 CYB5R1Q9UHQ9 305 aa1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 A4GNTQ9UNA3 340 aa1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZNF256Q9Y2P7 627 aaPredicted RBP1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 ADAM18Q9Y3Q7 739 aa1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 LRP12Q9Y561 859 aa1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 IER3IP1Q9Y5U9 82 aa1.89□□□□□ -2.11
RNU4-53P-201ENST00000410828 KIAA1109Q2LD37 5005 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 IGKV1D-17A0A075B6S4 117 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 A0A087WUU8 490 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 IGLV1-36A0A0B4J1U3 117 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 PSMB11A5LHX3 300 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 RFPL4AA6NLU0 287 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 TMEM210A6NLX4 147 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 C17orf98A8MV24 154 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 ODF3BA8MYP8 253 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 SEC14L6B5MCN3 397 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 RFPL4AL1F8VTS6 287 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 CCL24O00175 119 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 SLC1A7O00341 560 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 DCTN6O00399 190 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 SOCS2O14508 198 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 CDC42EP2O14613 210 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 IMPA2O14732 288 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 RGS16O15492 202 aaPredicted RBP1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 SNNO75324 88 aaPredicted RBP1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 DNAJC8O75937 253 aaPredicted RBP1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 NDUFB2O95178 105 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 LY86O95711 162 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 TXNDC12O95881 172 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 RENP00797 406 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 HLA-DQA2P01906 255 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 PGA5P0DJD9 388 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 TROVE2P10155 538 aaKnown RBP eCLIP1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 SLC2A1P11166 492 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 PSG2P11465 335 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZNF823P16415 610 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 CCL3L1P16619 93 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 TNFRSF1BP20333 461 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 GLRA1P23415 457 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 CFL1P23528 166 aaKnown RBP1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 HTR1DP28221 377 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 NOS3P29474 1203 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 OTX1P32242 354 aaPredicted RBP1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 BRS3P32247 399 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 CDKN2AP42771 156 aaKnown RBP1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 SLC15A1P46059 708 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 GPR4P46093 362 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 YAP1P46937 504 aaKnown RBP1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR1E2P47887 323 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 CEBPDP49716 269 aaPredicted RBP1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 VEGFCP49767 419 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 ENTPD1P49961 510 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 INSL3P51460 131 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 RPS6KA3P51812 740 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 PRKXP51817 358 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 ARHGDIBP52566 201 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 CRYBA2P53672 197 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 MTPNP58546 118 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 SLC35B1P78383 322 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 MXRA7P84157 204 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 IL18R1Q13478 541 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 FHL1Q13642 323 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 NFYCQ13952 458 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 SELPLGQ14242 412 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 TRAM2Q15035 370 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 SEC23BQ15437 767 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 TAF13Q15543 124 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 TIGD6Q17RP2 521 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 VMACQ2NL98 169 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 KRT71Q3SY84 523 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZNF260Q3ZCT1 412 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 ABCA11PQ4W5N1 156 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 AGKQ53H12 422 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 FAM76BQ5HYJ3 339 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 C9orf152Q5JTZ5 239 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 FAM27D1Q5T7N8 215 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 MINOS1Q5TGZ0 78 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 AGBL2Q5U5Z8 902 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZNF626Q68DY1 528 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 TMEM200BQ69YZ2 307 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 LCN8Q6JVE9 175 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 EPGNQ6UW88 154 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 C10orf99Q6UWK7 81 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 DLEU7Q6UYE1 221 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms