RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 GGNQ86UU5 652 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 ZNF683Q8IZ20 524 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 TMEM99Q8N816 258 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 ZDHHC22Q8N966 263 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 CCDC54Q8NEL0 328 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 OR4K1Q8NGD4 311 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 OR10AD1Q8NGE0 317 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 OR51S1Q8NGJ8 323 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 OR13C8Q8NGS7 320 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 FAM110DQ8TAY7 271 aaPredicted RBP4.82□□□□□ -1.64
CLK1-202ENST00000409403 AKR1E2Q96JD6 320 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 CASD1Q96PB1 797 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 PRRT1Q99946 306 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 TRMT61BQ9BVS5 477 aaKnown RBP4.82□□□□□ -1.64
CLK1-202ENST00000409403 TM2D2Q9BX73 214 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 PRO1933Q9H354 126 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 PDFQ9HBH1 243 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 BCL2L10Q9HD36 194 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 KCNJ16Q9NPI9 418 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 HINT3Q9NQE9 182 aaKnown RBP4.82□□□□□ -1.64
CLK1-202ENST00000409403 KLHL28Q9NXS3 571 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 IL17CQ9P0M4 197 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 TRPC4Q9UBN4 977 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 SLC25A10Q9UBX3 287 aaPredicted RBP4.82□□□□□ -1.64
CLK1-202ENST00000409403 PRODH2Q9UF12 536 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 CRLS1Q9UJA2 301 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 OSGIN2Q9Y236 505 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 HDGFL3Q9Y3E1 203 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 MMACHCQ9Y4U1 282 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 CSMD1Q96PZ7 3565 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 GOLGA4Q13439 2230 aaKnown RBP4.82□□□□□ -1.64
CLK1-202ENST00000409403 FBN1P35555 2871 aaKnown RBP4.81□□□□□ -1.64
CLK1-202ENST00000409403 A0A087WUU8 490 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 A0A087WZY1 265 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 A0A0A6YYH2 397 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 A0A1B0GW64 132 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 GAGE10A6NGK3 116 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 A6NJ64 397 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 IFITM10A6NMD0 228 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 RIIAD1A6NNX1 92 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 C9J4A7 227 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 UMAD1C9J7I0 102 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 FAM157AC9JC47 383 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 SOCS6O14544 535 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 TP53I11O14683 189 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 OR1F1O43749 312 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 CDC40O60508 579 aaKnown RBP eCLIP4.81□□□□□ -1.64
CLK1-202ENST00000409403 ZNF821O75541 412 aaPredicted RBP4.81□□□□□ -1.64
CLK1-202ENST00000409403 RCBTB2O95199 551 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 HLA-AP01891 365 aaKnown RBP4.81□□□□□ -1.64
CLK1-202ENST00000409403 HLA-DQA2P01906 255 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 OPN1LWP04000 364 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 GAPDHP04406 335 aaKnown RBP4.81□□□□□ -1.64
CLK1-202ENST00000409403 NR2F1P10589 423 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 PGAM2P15259 253 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 SRMP19623 302 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 CXCR1P25024 350 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 PYCR1P32322 319 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 PPICP45877 212 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 DHPSP49366 369 aaPredicted RBP4.81□□□□□ -1.64
CLK1-202ENST00000409403 IDH3GP51553 393 aaPredicted RBP4.81□□□□□ -1.64
CLK1-202ENST00000409403 TDGF1P3P51864 188 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 ATP1B3P54709 279 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 DHRS2Q13268 280 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 IL13RA2Q14627 380 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 CLINT1Q14677 625 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 ATXN7L3Q14CW9 347 aaPredicted RBP4.81□□□□□ -1.64
CLK1-202ENST00000409403 PRICKLE4Q2TBC4 344 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 KHDC3LQ587J8 217 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 CLEC12AQ5QGZ9 265 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 OR2A2Q6IF42 318 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 FAM71E1Q6IPT2 247 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 OPN5Q6U736 354 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 LANCL3Q6ZV70 420 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 H1FNTQ75WM6 255 aaPredicted RBP4.81□□□□□ -1.64
CLK1-202ENST00000409403 FCRLAQ7L513 359 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 TMED4Q7Z7H5 227 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 TRAPPC5Q8IUR0 188 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 GABRG1Q8N1C3 465 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 FRMD1Q8N878 549 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 BMPERQ8N8U9 685 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 ACOT4Q8N9L9 421 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 OR4K14Q8NGD5 310 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 OR2AP1Q8NGE2 309 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 OR10A7Q8NGE5 316 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 OR5AK3PQ8NH89 298 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 LYPD6BQ8NI32 183 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 NEK7Q8TDX7 302 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 MITD1Q8WV92 249 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 SMARCD2Q92925 531 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 MR1Q95460 341 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 FBXO32Q969P5 355 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 UBE2E3Q969T4 207 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 CMBLQ96DG6 245 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 ADGRG7Q96K78 797 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 AQP10Q96PS8 301 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 OR2M4Q96R27 311 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 TMEM208Q9BTX3 173 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 SLC35B3Q9H1N7 401 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 PCED1AQ9H1Q7 454 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms