RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 B4DEV8 164 aa11.67□□□□□ -0.54
RNF43-201ENST00000407977 HNF1AP20823 631 aa11.67□□□□□ -0.54
RNF43-201ENST00000407977 CD200P41217 278 aa11.67□□□□□ -0.54
RNF43-201ENST00000407977 ZNF154Q13106 437 aa11.67□□□□□ -0.54
RNF43-201ENST00000407977 ETFDHQ16134 617 aa11.67□□□□□ -0.54
RNF43-201ENST00000407977 BET1LQ9NYM9 111 aa11.67□□□□□ -0.54
RNF43-201ENST00000407977 RGPD1P0DJD0 1748 aa11.67□□□□□ -0.54
RNF43-201ENST00000407977 LOC102723971A0A1B0GUV8 181 aa11.67□□□□□ -0.54
RNF43-201ENST00000407977 FAM221AA4D161 298 aa11.67□□□□□ -0.54
RNF43-201ENST00000407977 COX7A2P2O60397 106 aa11.67□□□□□ -0.54
RNF43-201ENST00000407977 CTAG2O75638 210 aa11.67□□□□□ -0.54
RNF43-201ENST00000407977 SDHBP21912 280 aa11.67□□□□□ -0.54
RNF43-201ENST00000407977 ZBTB25P24278 435 aa11.67□□□□□ -0.54
RNF43-201ENST00000407977 Q8IYB0 196 aa11.67□□□□□ -0.54
RNF43-201ENST00000407977 GALMQ96C23 342 aa11.67□□□□□ -0.54
RNF43-201ENST00000407977 OR5V1Q9UGF6 321 aa11.67□□□□□ -0.54
RNF43-201ENST00000407977 ZNF107Q9UII5 783 aaPredicted RBP11.67□□□□□ -0.54
RNF43-201ENST00000407977 PHLPP1O60346 1717 aa11.66□□□□□ -0.54
RNF43-201ENST00000407977 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.66□□□□□ -0.54
RNF43-201ENST00000407977 HPP00738 406 aa11.66□□□□□ -0.54
RNF43-201ENST00000407977 F2RP25116 425 aa11.66□□□□□ -0.54
RNF43-201ENST00000407977 CD96P40200 585 aa11.66□□□□□ -0.54
RNF43-201ENST00000407977 HLA-DRB3P79483 266 aa11.66□□□□□ -0.54
RNF43-201ENST00000407977 HES1Q14469 280 aa11.66□□□□□ -0.54
RNF43-201ENST00000407977 SURF2Q15527 256 aaPredicted RBP11.66□□□□□ -0.54
RNF43-201ENST00000407977 LHFPL5Q8TAF8 219 aa11.66□□□□□ -0.54
RNF43-201ENST00000407977 TAAR9Q96RI9 348 aa11.66□□□□□ -0.54
RNF43-201ENST00000407977 LPAR3Q9UBY5 353 aa11.66□□□□□ -0.54
RNF43-201ENST00000407977 FAM166BA8MTA8 275 aa11.66□□□□□ -0.54
RNF43-201ENST00000407977 GABRA1P14867 456 aa11.66□□□□□ -0.54
RNF43-201ENST00000407977 KIAA0040Q15053 153 aa11.66□□□□□ -0.54
RNF43-201ENST00000407977 NKAIN2Q5VXU1 208 aa11.66□□□□□ -0.54
RNF43-201ENST00000407977 NOXO1Q8NFA2 376 aa11.66□□□□□ -0.54
RNF43-201ENST00000407977 WDR61Q9GZS3 305 aaKnown RBP11.66□□□□□ -0.54
RNF43-201ENST00000407977 DUXBA0A1W2PPF3 345 aa11.66□□□□□ -0.54
RNF43-201ENST00000407977 GPANK1O95872 356 aa11.66□□□□□ -0.54
RNF43-201ENST00000407977 HAAOP46952 286 aa11.66□□□□□ -0.54
RNF43-201ENST00000407977 TM4SF4P48230 202 aa11.66□□□□□ -0.54
RNF43-201ENST00000407977 FXNQ16595 210 aa11.66□□□□□ -0.54
RNF43-201ENST00000407977 CLEC12BQ2HXU8 276 aa11.66□□□□□ -0.54
RNF43-201ENST00000407977 LYRM7Q5U5X0 104 aa11.66□□□□□ -0.54
RNF43-201ENST00000407977 KMT5CQ86Y97 462 aa11.66□□□□□ -0.54
RNF43-201ENST00000407977 ORAI1Q96D31 301 aa11.66□□□□□ -0.54
RNF43-201ENST00000407977 IP6K3Q96PC2 410 aa11.66□□□□□ -0.54
RNF43-201ENST00000407977 OCIAD1Q9NX40 245 aa11.66□□□□□ -0.54
RNF43-201ENST00000407977 UBE2L5PA0A1B0GUS4 154 aa11.66□□□□□ -0.54
RNF43-201ENST00000407977 WNT3P56703 355 aa11.66□□□□□ -0.54
RNF43-201ENST00000407977 KIAA1456Q9P272 454 aa11.66□□□□□ -0.54
RNF43-201ENST00000407977 TMEM272A0A1B0GTI8 110 aa11.65□□□□□ -0.54
RNF43-201ENST00000407977 A0A1W2PNR3 127 aa11.65□□□□□ -0.54
RNF43-201ENST00000407977 ZFPL1O95159 310 aa11.65□□□□□ -0.54
RNF43-201ENST00000407977 PTBP3O95758 552 aaKnown RBP11.65□□□□□ -0.54
RNF43-201ENST00000407977 ATP6V1FQ16864 119 aa11.65□□□□□ -0.54
RNF43-201ENST00000407977 OR5AS1Q8N127 324 aa11.65□□□□□ -0.54
RNF43-201ENST00000407977 Q9N2K0 584 aa11.65□□□□□ -0.54
RNF43-201ENST00000407977 OR51B4Q9Y5P0 310 aa11.65□□□□□ -0.54
RNF43-201ENST00000407977 C5orf49A4QMS7 147 aa11.65□□□□□ -0.54
RNF43-201ENST00000407977 PMCHP20382 165 aa11.65□□□□□ -0.54
RNF43-201ENST00000407977 MLF1P58340 268 aa11.65□□□□□ -0.54
RNF43-201ENST00000407977 OR2B11Q5JQS5 317 aa11.65□□□□□ -0.54
RNF43-201ENST00000407977 OR10X1Q8NGY0 326 aa11.65□□□□□ -0.54
RNF43-201ENST00000407977 OIT3Q8WWZ8 545 aa11.65□□□□□ -0.54
RNF43-201ENST00000407977 EXTL1Q92935 676 aa11.65□□□□□ -0.54
RNF43-201ENST00000407977 MAP1LC3B2A6NCE7 125 aa11.65□□□□□ -0.54
RNF43-201ENST00000407977 C21orf58P58505 322 aa11.65□□□□□ -0.54
RNF43-201ENST00000407977 FUT7Q11130 342 aa11.65□□□□□ -0.54
RNF43-201ENST00000407977 RAB32Q13637 225 aa11.65□□□□□ -0.54
RNF43-201ENST00000407977 WDR38Q5JTN6 314 aa11.65□□□□□ -0.54
RNF43-201ENST00000407977 MRPS24Q96EL2 167 aaKnown RBP11.65□□□□□ -0.54
RNF43-201ENST00000407977 POM121L2Q96KW2 1035 aa11.65□□□□□ -0.54
RNF43-201ENST00000407977 MAP1LC3BQ9GZQ8 125 aa11.65□□□□□ -0.54
RNF43-201ENST00000407977 BARX1Q9HBU1 254 aaPredicted RBP11.65□□□□□ -0.54
RNF43-201ENST00000407977 MMP25Q9NPA2 562 aa11.65□□□□□ -0.54
RNF43-201ENST00000407977 SLC6A13Q9NSD5 602 aa11.65□□□□□ -0.54
RNF43-201ENST00000407977 NAT8BQ9UHF3 227 aa11.65□□□□□ -0.54
RNF43-201ENST00000407977 TOPAZ1Q8N9V7 1692 aa11.65□□□□□ -0.54
RNF43-201ENST00000407977 SOX15O60248 233 aa11.65□□□□□ -0.54
RNF43-201ENST00000407977 NKX2-2O95096 273 aa11.65□□□□□ -0.54
RNF43-201ENST00000407977 MBPP02686 304 aaPredicted RBP11.65□□□□□ -0.54
RNF43-201ENST00000407977 PAX5Q02548 391 aa11.65□□□□□ -0.54
RNF43-201ENST00000407977 SMIM21Q3B7S5 101 aa11.65□□□□□ -0.54
RNF43-201ENST00000407977 OR2A2Q6IF42 318 aa11.65□□□□□ -0.54
RNF43-201ENST00000407977 OR2C3Q8N628 320 aa11.65□□□□□ -0.54
RNF43-201ENST00000407977 ST6GAL1P15907 406 aa11.64□□□□□ -0.55
RNF43-201ENST00000407977 TMEM11P17152 192 aa11.64□□□□□ -0.55
RNF43-201ENST00000407977 CCR5P51681 352 aa11.64□□□□□ -0.55
RNF43-201ENST00000407977 OR1D5P58170 312 aa11.64□□□□□ -0.55
RNF43-201ENST00000407977 INPP5JQ15735 1006 aaPredicted RBP11.64□□□□□ -0.55
RNF43-201ENST00000407977 LINC00696Q6ZRV3 163 aa11.64□□□□□ -0.55
RNF43-201ENST00000407977 C9orf62Q8N4C0 152 aa11.64□□□□□ -0.55
RNF43-201ENST00000407977 C12orf49Q9H741 205 aa11.64□□□□□ -0.55
RNF43-201ENST00000407977 LSM2Q9Y333 95 aaKnown RBP11.64□□□□□ -0.55
RNF43-201ENST00000407977 CAPZBP47756 277 aa11.64□□□□□ -0.55
RNF43-201ENST00000407977 RPL29P47914 159 aaKnown RBP11.64□□□□□ -0.55
RNF43-201ENST00000407977 SPCS3P61009 180 aa11.64□□□□□ -0.55
RNF43-201ENST00000407977 IGFBP7Q16270 282 aa11.64□□□□□ -0.55
RNF43-201ENST00000407977 TRIM61Q5EBN2 209 aa11.64□□□□□ -0.55
RNF43-201ENST00000407977 JMJD6Q6NYC1 403 aaPredicted RBP11.64□□□□□ -0.55
RNF43-201ENST00000407977 APOBEC3DQ96AK3 386 aaPredicted RBP11.64□□□□□ -0.55
RNF43-201ENST00000407977 SLC45A2Q9UMX9 530 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms