RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 OR5H2Q8NGV7 314 aa17.49■□□□□ 0.39
CCDC47-202ENST00000403162 WNT2BQ93097 391 aa17.49■□□□□ 0.39
CCDC47-202ENST00000403162 SMIM8Q96KF7 97 aa17.49■□□□□ 0.39
CCDC47-202ENST00000403162 RTBDNQ9BSG5 229 aaPredicted RBP17.49■□□□□ 0.39
CCDC47-202ENST00000403162 C2orf72A6NCS6 295 aa17.48■□□□□ 0.39
CCDC47-202ENST00000403162 RAD51DO75771 328 aa17.48■□□□□ 0.39
CCDC47-202ENST00000403162 CSTBP04080 98 aaKnown RBP17.48■□□□□ 0.39
CCDC47-202ENST00000403162 PET100P0DJ07 73 aa17.48■□□□□ 0.39
CCDC47-202ENST00000403162 ABOP16442 354 aa17.48■□□□□ 0.39
CCDC47-202ENST00000403162 OR3A4PP47883 348 aa17.48■□□□□ 0.39
CCDC47-202ENST00000403162 ANKRD55Q3KP44 614 aa17.48■□□□□ 0.39
CCDC47-202ENST00000403162 PLPP5Q8NEB5 264 aa17.48■□□□□ 0.39
CCDC47-202ENST00000403162 SLC26A1Q9H2B4 701 aa17.48■□□□□ 0.39
CCDC47-202ENST00000403162 ZFP57Q9NU63 452 aa17.48■□□□□ 0.39
CCDC47-202ENST00000403162 B3GAT1Q9P2W7 334 aa17.48■□□□□ 0.39
CCDC47-202ENST00000403162 A0A1B0GX78 115 aa17.47■□□□□ 0.39
CCDC47-202ENST00000403162 VSTM2BA6NLU5 285 aa17.47■□□□□ 0.39
CCDC47-202ENST00000403162 ETV2O00321 342 aaPredicted RBP17.47■□□□□ 0.39
CCDC47-202ENST00000403162 NPBWR1P48145 328 aa17.47■□□□□ 0.39
CCDC47-202ENST00000403162 FBXW4P57775 412 aa17.47■□□□□ 0.39
CCDC47-202ENST00000403162 FOXF1Q12946 379 aa17.47■□□□□ 0.39
CCDC47-202ENST00000403162 NSUN5P2Q63ZY6 315 aa17.47■□□□□ 0.39
CCDC47-202ENST00000403162 BHLHE23Q8NDY6 225 aa17.47■□□□□ 0.39
CCDC47-202ENST00000403162 C2orf50Q96LR7 162 aa17.47■□□□□ 0.39
CCDC47-202ENST00000403162 SLC5A7Q9GZV3 580 aa17.47■□□□□ 0.39
CCDC47-202ENST00000403162 ACKR4Q9NPB9 350 aa17.47■□□□□ 0.39
CCDC47-202ENST00000403162 SEMA5BQ9P283 1151 aa17.47■□□□□ 0.39
CCDC47-202ENST00000403162 VDAC3Q9Y277 283 aa17.47■□□□□ 0.39
CCDC47-202ENST00000403162 FER1L5A0AVI2 2057 aa17.47■□□□□ 0.39
CCDC47-202ENST00000403162 CCL1P22362 96 aa17.47■□□□□ 0.39
CCDC47-202ENST00000403162 ACP1P24666 158 aa17.47■□□□□ 0.39
CCDC47-202ENST00000403162 EIF5AP63241 154 aaKnown RBP17.47■□□□□ 0.39
CCDC47-202ENST00000403162 IL15RAQ13261 267 aa17.47■□□□□ 0.39
CCDC47-202ENST00000403162 ABHD12BQ7Z5M8 362 aaPredicted RBP17.47■□□□□ 0.39
CCDC47-202ENST00000403162 POC1AQ8NBT0 407 aa17.47■□□□□ 0.39
CCDC47-202ENST00000403162 OR8B12Q8NGG6 310 aa17.47■□□□□ 0.39
CCDC47-202ENST00000403162 OR13G1Q8NGZ3 307 aa17.47■□□□□ 0.39
CCDC47-202ENST00000403162 OR10C1Q96KK4 312 aa17.47■□□□□ 0.39
CCDC47-202ENST00000403162 NRIP2Q9BQI9 281 aa17.47■□□□□ 0.39
CCDC47-202ENST00000403162 BANF2Q9H503 90 aa17.47■□□□□ 0.39
CCDC47-202ENST00000403162 ZNF768Q9H5H4 540 aaKnown RBP17.47■□□□□ 0.39
CCDC47-202ENST00000403162 RCC2Q9P258 522 aaKnown RBP17.47■□□□□ 0.39
CCDC47-202ENST00000403162 OSGIN2Q9Y236 505 aa17.47■□□□□ 0.39
CCDC47-202ENST00000403162 WIF1Q9Y5W5 379 aa17.47■□□□□ 0.39
CCDC47-202ENST00000403162 ZNF354AO60765 605 aaPredicted RBP17.46■□□□□ 0.39
CCDC47-202ENST00000403162 CAV2P51636 162 aa17.46■□□□□ 0.39
CCDC47-202ENST00000403162 C1orf189Q5VU69 101 aa17.46■□□□□ 0.39
CCDC47-202ENST00000403162 AADACL3Q5VUY0 350 aa17.46■□□□□ 0.39
CCDC47-202ENST00000403162 C16orf47Q6ZP98 133 aaPredicted RBP17.46■□□□□ 0.39
CCDC47-202ENST00000403162 KMT5CQ86Y97 462 aa17.46■□□□□ 0.39
CCDC47-202ENST00000403162 D2HGDHQ8N465 521 aa17.46■□□□□ 0.39
CCDC47-202ENST00000403162 NOXO1Q8NFA2 376 aa17.46■□□□□ 0.39
CCDC47-202ENST00000403162 OR2AJ1Q8NGZ0 328 aa17.46■□□□□ 0.39
CCDC47-202ENST00000403162 SSC4DQ8WTU2 575 aa17.46■□□□□ 0.39
CCDC47-202ENST00000403162 ARHGAP5-AS1Q96IT6 56 aa17.46■□□□□ 0.39
CCDC47-202ENST00000403162 URM1Q9BTM9 101 aaKnown RBP17.46■□□□□ 0.39
CCDC47-202ENST00000403162 TMEM231Q9H6L2 316 aa17.46■□□□□ 0.39
CCDC47-202ENST00000403162 RHOFQ9HBH0 211 aa17.46■□□□□ 0.39
CCDC47-202ENST00000403162 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.46■□□□□ 0.39
CCDC47-202ENST00000403162 BIN3Q9NQY0 253 aa17.46■□□□□ 0.39
CCDC47-202ENST00000403162 ASCC3Q8N3C0 2202 aaKnown RBP17.46■□□□□ 0.39
CCDC47-202ENST00000403162 IGHV5-10-1A0A0J9YXX1 117 aa17.46■□□□□ 0.39
CCDC47-202ENST00000403162 TAAR5O14804 337 aa17.46■□□□□ 0.39
CCDC47-202ENST00000403162 GDF9O60383 454 aa17.46■□□□□ 0.39
CCDC47-202ENST00000403162 F12P00748 615 aaPredicted RBP17.46■□□□□ 0.39
CCDC47-202ENST00000403162 RPS2P15880 293 aaKnown RBP17.46■□□□□ 0.39
CCDC47-202ENST00000403162 AMY2BP19961 511 aa17.46■□□□□ 0.39
CCDC47-202ENST00000403162 COMMD2Q86X83 199 aa17.46■□□□□ 0.39
CCDC47-202ENST00000403162 GPR84Q9NQS5 396 aa17.46■□□□□ 0.39
CCDC47-202ENST00000403162 POLR1DQ9Y2S0 133 aa17.46■□□□□ 0.39
CCDC47-202ENST00000403162 PQLC2LA1A4F0 135 aa17.45■□□□□ 0.38
CCDC47-202ENST00000403162 H3BML4 177 aa17.45■□□□□ 0.38
CCDC47-202ENST00000403162 TOX3O15405 576 aaPredicted RBP17.45■□□□□ 0.38
CCDC47-202ENST00000403162 PGA4P0DJD7 388 aa17.45■□□□□ 0.38
CCDC47-202ENST00000403162 PGA3P0DJD8 388 aa17.45■□□□□ 0.38
CCDC47-202ENST00000403162 FOLR1P15328 257 aa17.45■□□□□ 0.38
CCDC47-202ENST00000403162 ZNF17P17021 662 aa17.45■□□□□ 0.38
CCDC47-202ENST00000403162 PI3P19957 117 aa17.45■□□□□ 0.38
CCDC47-202ENST00000403162 RPL35P42766 123 aaKnown RBP17.45■□□□□ 0.38
CCDC47-202ENST00000403162 ZNF121P58317 390 aaPredicted RBP17.45■□□□□ 0.38
CCDC47-202ENST00000403162 CLRN1P58418 232 aa17.45■□□□□ 0.38
CCDC47-202ENST00000403162 RAB32Q13637 225 aa17.45■□□□□ 0.38
CCDC47-202ENST00000403162 GFOD2Q3B7J2 385 aa17.45■□□□□ 0.38
CCDC47-202ENST00000403162 EIF5AL1Q6IS14 154 aaKnown RBP17.45■□□□□ 0.38
CCDC47-202ENST00000403162 FAM89BQ8N5H3 189 aa17.45■□□□□ 0.38
CCDC47-202ENST00000403162 ADPRHL1Q8NDY3 354 aa17.45■□□□□ 0.38
CCDC47-202ENST00000403162 DMBX1Q8NFW5 382 aa17.45■□□□□ 0.38
CCDC47-202ENST00000403162 CCDC74BQ96LY2 380 aa17.45■□□□□ 0.38
CCDC47-202ENST00000403162 SOX7Q9BT81 388 aa17.45■□□□□ 0.38
CCDC47-202ENST00000403162 METTL8Q9H825 291 aaKnown RBP17.45■□□□□ 0.38
CCDC47-202ENST00000403162 PRR13Q9NZ81 148 aa17.45■□□□□ 0.38
CCDC47-202ENST00000403162 OTOGLQ3ZCN5 2332 aa17.45■□□□□ 0.38
CCDC47-202ENST00000403162 A0A1W2PP11 408 aa17.45■□□□□ 0.38
CCDC47-202ENST00000403162 FIGNL2A6NMB9 653 aa17.45■□□□□ 0.38
CCDC47-202ENST00000403162 CRTAPO75718 401 aaPredicted RBP17.45■□□□□ 0.38
CCDC47-202ENST00000403162 HCKP08631 526 aa17.45■□□□□ 0.38
CCDC47-202ENST00000403162 MUC1P15941 1255 aaPredicted RBP17.45■□□□□ 0.38
CCDC47-202ENST00000403162 AKR1D1P51857 326 aa17.45■□□□□ 0.38
CCDC47-202ENST00000403162 TAS2R46P59540 309 aa17.45■□□□□ 0.38
CCDC47-202ENST00000403162 OR51F2Q8NH61 342 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms