RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 CNTNAP3BQ96NU0 1288 aa13.82□□□□□ -0.2
HOXA3-202ENST00000396352 OR5B2Q96R09 309 aa13.82□□□□□ -0.2
HOXA3-202ENST00000396352 URM1Q9BTM9 101 aaKnown RBP13.82□□□□□ -0.2
HOXA3-202ENST00000396352 ZNF705EA8MWA4 302 aaPredicted RBP13.82□□□□□ -0.2
HOXA3-202ENST00000396352 QDPRP09417 244 aa13.82□□□□□ -0.2
HOXA3-202ENST00000396352 IL34Q6ZMJ4 242 aa13.82□□□□□ -0.2
HOXA3-202ENST00000396352 OR5D18Q8NGL1 313 aa13.82□□□□□ -0.2
HOXA3-202ENST00000396352 MAFIPQ8WZ33 124 aa13.82□□□□□ -0.2
HOXA3-202ENST00000396352 C2orf50Q96LR7 162 aa13.82□□□□□ -0.2
HOXA3-202ENST00000396352 NCOA6Q14686 2063 aaPredicted RBP13.82□□□□□ -0.2
HOXA3-202ENST00000396352 H7C2Y5 167 aa13.82□□□□□ -0.2
HOXA3-202ENST00000396352 IGLV3-1P01715 115 aa13.82□□□□□ -0.2
HOXA3-202ENST00000396352 HPNP05981 417 aa13.82□□□□□ -0.2
HOXA3-202ENST00000396352 SNU13P55769 128 aaKnown RBP13.82□□□□□ -0.2
HOXA3-202ENST00000396352 ZNF283Q8N7M2 679 aa13.82□□□□□ -0.2
HOXA3-202ENST00000396352 OR51T1Q8NGJ9 327 aa13.82□□□□□ -0.2
HOXA3-202ENST00000396352 SCGB3A2Q96PL1 93 aa13.82□□□□□ -0.2
HOXA3-202ENST00000396352 UQCC1Q9NVA1 299 aa13.82□□□□□ -0.2
HOXA3-202ENST00000396352 MBTPS2O43462 519 aa13.81□□□□□ -0.2
HOXA3-202ENST00000396352 NPBWR1P48145 328 aa13.81□□□□□ -0.2
HOXA3-202ENST00000396352 PJVKQ0ZLH3 352 aa13.81□□□□□ -0.2
HOXA3-202ENST00000396352 KISS1Q15726 138 aa13.81□□□□□ -0.2
HOXA3-202ENST00000396352 NKAIN1Q4KMZ8 207 aa13.81□□□□□ -0.2
HOXA3-202ENST00000396352 FAM69BQ5VUD6 431 aa13.81□□□□□ -0.2
HOXA3-202ENST00000396352 DTX1Q86Y01 620 aa13.81□□□□□ -0.2
HOXA3-202ENST00000396352 LIN37Q96GY3 246 aaPredicted RBP13.81□□□□□ -0.2
HOXA3-202ENST00000396352 SMIM8Q96KF7 97 aa13.81□□□□□ -0.2
HOXA3-202ENST00000396352 SEC11CQ9BY50 192 aa13.81□□□□□ -0.2
HOXA3-202ENST00000396352 SLC7A5P2Q9GIP4 190 aa13.81□□□□□ -0.2
HOXA3-202ENST00000396352 METTL8Q9H825 291 aaKnown RBP13.81□□□□□ -0.2
HOXA3-202ENST00000396352 LHX6Q9UPM6 363 aa13.81□□□□□ -0.2
HOXA3-202ENST00000396352 PRF1P14222 555 aa13.81□□□□□ -0.2
HOXA3-202ENST00000396352 PTGFRP43088 359 aa13.81□□□□□ -0.2
HOXA3-202ENST00000396352 ALDH3B1P43353 468 aa13.81□□□□□ -0.2
HOXA3-202ENST00000396352 TAS2R46P59540 309 aa13.81□□□□□ -0.2
HOXA3-202ENST00000396352 CSNK2A1P68400 391 aaPredicted RBP13.81□□□□□ -0.2
HOXA3-202ENST00000396352 FAM189A2Q15884 450 aa13.81□□□□□ -0.2
HOXA3-202ENST00000396352 CSNK2A3Q8NEV1 391 aa13.81□□□□□ -0.2
HOXA3-202ENST00000396352 OR2M3Q8NG83 312 aa13.81□□□□□ -0.2
HOXA3-202ENST00000396352 OXGR1Q96P68 337 aa13.81□□□□□ -0.2
HOXA3-202ENST00000396352 METTL7AQ9H8H3 244 aa13.81□□□□□ -0.2
HOXA3-202ENST00000396352 EHFQ9NZC4 300 aa13.81□□□□□ -0.2
HOXA3-202ENST00000396352 NAT2P11245 290 aa13.81□□□□□ -0.2
HOXA3-202ENST00000396352 OR3A2P47893 321 aa13.81□□□□□ -0.2
HOXA3-202ENST00000396352 GRB2P62993 217 aaKnown RBP13.81□□□□□ -0.2
HOXA3-202ENST00000396352 NSUN5P2Q63ZY6 315 aa13.81□□□□□ -0.2
HOXA3-202ENST00000396352 RABEPKQ7Z6M1 372 aa13.81□□□□□ -0.2
HOXA3-202ENST00000396352 PECRQ9BY49 303 aa13.81□□□□□ -0.2
HOXA3-202ENST00000396352 TREM1Q9NP99 234 aa13.81□□□□□ -0.2
HOXA3-202ENST00000396352 MYOTQ9UBF9 498 aa13.81□□□□□ -0.2
HOXA3-202ENST00000396352 DNAJB11Q9UBS4 358 aa13.81□□□□□ -0.2
HOXA3-202ENST00000396352 OR2J2O76002 312 aa13.8□□□□□ -0.2
HOXA3-202ENST00000396352 ZNF239Q16600 458 aaKnown RBP13.8□□□□□ -0.2
HOXA3-202ENST00000396352 PCED1AQ9H1Q7 454 aa13.8□□□□□ -0.2
HOXA3-202ENST00000396352 OR2S2Q9NQN1 319 aa13.8□□□□□ -0.2
HOXA3-202ENST00000396352 FAM96BQ9Y3D0 163 aa13.8□□□□□ -0.2
HOXA3-202ENST00000396352 MED12Q93074 2177 aa13.8□□□□□ -0.2
HOXA3-202ENST00000396352 MYO7BQ6PIF6 2116 aa13.8□□□□□ -0.2
HOXA3-202ENST00000396352 EML6Q6ZMW3 1958 aa13.8□□□□□ -0.2
HOXA3-202ENST00000396352 PVALBP20472 110 aaPredicted RBP13.8□□□□□ -0.2
HOXA3-202ENST00000396352 ZNF84P51523 738 aa13.8□□□□□ -0.2
HOXA3-202ENST00000396352 ECH1Q13011 328 aa13.8□□□□□ -0.2
HOXA3-202ENST00000396352 ZNF574Q6ZN55 896 aaPredicted RBP13.8□□□□□ -0.2
HOXA3-202ENST00000396352 NPRL2Q8WTW4 380 aa13.8□□□□□ -0.2
HOXA3-202ENST00000396352 WDFY3Q8IZQ1 3526 aa13.8□□□□□ -0.2
HOXA3-202ENST00000396352 AQP7P3A6NL99 342 aa13.79□□□□□ -0.2
HOXA3-202ENST00000396352 ZNF43P17038 809 aa13.79□□□□□ -0.2
HOXA3-202ENST00000396352 CTSSP25774 331 aa13.79□□□□□ -0.2
HOXA3-202ENST00000396352 SFTPDP35247 375 aa13.79□□□□□ -0.2
HOXA3-202ENST00000396352 PTGER4P35408 488 aa13.79□□□□□ -0.2
HOXA3-202ENST00000396352 EIF3IQ13347 325 aaKnown RBP13.79□□□□□ -0.2
HOXA3-202ENST00000396352 SPAG16Q8N0X2 631 aa13.79□□□□□ -0.2
HOXA3-202ENST00000396352 OR5L2Q8NGL0 311 aa13.79□□□□□ -0.2
HOXA3-202ENST00000396352 SAT2Q96F10 170 aaPredicted RBP13.79□□□□□ -0.2
HOXA3-202ENST00000396352 NRIP2Q9BQI9 281 aa13.79□□□□□ -0.2
HOXA3-202ENST00000396352 HRH4Q9H3N8 390 aa13.79□□□□□ -0.2
HOXA3-202ENST00000396352 FIGNL2A6NMB9 653 aa13.79□□□□□ -0.2
HOXA3-202ENST00000396352 SNAPINO95295 136 aa13.79□□□□□ -0.2
HOXA3-202ENST00000396352 PET100P0DJ07 73 aa13.79□□□□□ -0.2
HOXA3-202ENST00000396352 SRFP11831 508 aa13.79□□□□□ -0.2
HOXA3-202ENST00000396352 MUC1P15941 1255 aaPredicted RBP13.79□□□□□ -0.2
HOXA3-202ENST00000396352 BLVRBP30043 206 aaPredicted RBP13.79□□□□□ -0.2
HOXA3-202ENST00000396352 LPAR6P43657 344 aa13.79□□□□□ -0.2
HOXA3-202ENST00000396352 COL19A1Q14993 1142 aa13.79□□□□□ -0.2
HOXA3-202ENST00000396352 UBE2V2Q15819 145 aa13.79□□□□□ -0.2
HOXA3-202ENST00000396352 RPL7L1Q6DKI1 246 aaKnown RBP13.79□□□□□ -0.2
HOXA3-202ENST00000396352 RAB11FIP2Q7L804 512 aa13.79□□□□□ -0.2
HOXA3-202ENST00000396352 PNLDC1Q8NA58 520 aaKnown RBP13.79□□□□□ -0.2
HOXA3-202ENST00000396352 RHOFQ9HBH0 211 aa13.79□□□□□ -0.2
HOXA3-202ENST00000396352 RCC2Q9P258 522 aaKnown RBP13.79□□□□□ -0.2
HOXA3-202ENST00000396352 MLXQ9UH92 298 aa13.79□□□□□ -0.2
HOXA3-202ENST00000396352 IGKV1D-8A0A087WSZ0 117 aa13.79□□□□□ -0.2
HOXA3-202ENST00000396352 DKK1O94907 266 aa13.79□□□□□ -0.2
HOXA3-202ENST00000396352 HOXB5P09067 269 aa13.79□□□□□ -0.2
HOXA3-202ENST00000396352 HKR1P10072 659 aa13.79□□□□□ -0.2
HOXA3-202ENST00000396352 RCC1P18754 421 aaPredicted RBP13.79□□□□□ -0.2
HOXA3-202ENST00000396352 ACY1Q03154 408 aa13.79□□□□□ -0.2
HOXA3-202ENST00000396352 SPEM2Q0P670 501 aa13.79□□□□□ -0.2
HOXA3-202ENST00000396352 SHEQ5VZ18 495 aa13.79□□□□□ -0.2
HOXA3-202ENST00000396352 WDSUB1Q8N9V3 476 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms