RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 SDK2Q58EX2 2172 aa6.31□□□□□ -1.4
SMAD1-202ENST00000394092 IGKV1-9A0A0C4DH69 117 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 A0A0G2JMM0 328 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 LOC100996750A0A140TA64 210 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 A0A1W2PPB8 328 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 A0A1W2PRS3 328 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 C9orf170A2RU37 121 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 OR6C6A6NF89 314 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 WIPF3A6NGB9 483 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 ZNF716A6NP11 495 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 KIR3DP1A8MWS1 328 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 STMND1H3BQB6 276 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 SOCS1O15524 211 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 SYNGR3O43761 229 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 CXCL13O43927 109 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 SSX5O60225 188 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 CYTIPO60759 359 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 OR2F2O95006 317 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 FARS2O95363 451 aaKnown RBP6.3□□□□□ -1.4
SMAD1-202ENST00000394092 DUS4LO95620 317 aaKnown RBP6.3□□□□□ -1.4
SMAD1-202ENST00000394092 RRASP10301 218 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 NAT2P11245 290 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 SLC25A4P12235 298 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 FCGR2AP12318 317 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 MGMTP16455 207 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 FAHP16930 419 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 AMY2BP19961 511 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 CRYGSP22914 178 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 FPR2P25090 351 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 OR3A2P47893 321 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 P2RX3P56373 397 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 IL13RA1P78552 427 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 CYCSP99999 105 aaKnown RBP6.3□□□□□ -1.4
SMAD1-202ENST00000394092 Q0VFX4 171 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 OR2F1Q13607 317 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 HLXQ14774 488 aaPredicted RBP6.3□□□□□ -1.4
SMAD1-202ENST00000394092 LPAL2Q16609 132 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 C2orf68Q2NKX9 166 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 SLC22A6Q4U2R8 563 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 NHLRC3Q5JS37 347 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 TOR2AQ5JU69 321 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 ABHD17BQ5VST6 288 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 DCAF12L2Q5VW00 463 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 TMEM65Q6PI78 240 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 LHFPL2Q6ZUX7 228 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 SLC16A14Q7RTX9 510 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 HOGA1Q86XE5 327 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 FAM89BQ8N5H3 189 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 TMEM105Q8N8V8 129 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 TMEM104Q8NE00 496 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 OR10D3Q8NH80 312 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 OR1F12Q8NHA8 337 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 TERB2Q8NHR7 220 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 FBXW5Q969U6 566 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 TMEM45BQ96B21 275 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 FBXO17Q96EF6 278 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 THOC3Q96J01 351 aaKnown RBP6.3□□□□□ -1.4
SMAD1-202ENST00000394092 ADGRG7Q96K78 797 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 IP6K3Q96PC2 410 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 FOXB1Q99853 325 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 FAM173AQ9BQD7 235 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 SOX7Q9BT81 388 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 KRTAP4-6Q9BYQ5 205 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 ARRDC1-AS1Q9H2J1 176 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 BANF2Q9H503 90 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 CRLF2Q9HC73 371 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 MED9Q9NWA0 146 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 LRFN1Q9P244 771 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 WDR87Q6ZQQ6 2873 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 ZDBF2Q9HCK1 2354 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 KMT2EQ8IZD2 1858 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 CCDC187A0A096LP49 1063 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 A0A0A6YYD4 124 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 KANTRA0A1W2PQU2 76 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 CEACAM18A8MTB9 384 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 CDK2AP1O14519 115 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 PMP2P02689 132 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 SP9P0CG40 484 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 SERPINA2P20848 420 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 VAMP1P23763 118 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 BLVRBP30043 206 aaPredicted RBP6.3□□□□□ -1.4
SMAD1-202ENST00000394092 CALCRP30988 508 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 HTR5AP47898 357 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 PPP1R1AQ13522 171 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 SURF2Q15527 256 aaPredicted RBP6.3□□□□□ -1.4
SMAD1-202ENST00000394092 MICBQ29980 383 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 HYAL4Q2M3T9 481 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 TMEM128Q5BJH2 165 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 PLAC9Q5JTB6 97 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 WIPI1Q5MNZ9 446 aaPredicted RBP6.3□□□□□ -1.4
SMAD1-202ENST00000394092 LY6G6FQ5SQ64 297 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 NSUN5P2Q63ZY6 315 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 TCEAL6Q6IPX3 200 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 PLXDC2Q6UX71 529 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 TIPARPQ7Z3E1 657 aaKnown RBP6.3□□□□□ -1.4
SMAD1-202ENST00000394092 GALNTL5Q7Z4T8 443 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 ZNF546Q86UE3 836 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 SULF2Q8IWU5 870 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 ZNF100Q8IYN0 542 aa6.3□□□□□ -1.4
SMAD1-202ENST00000394092 OR6K3Q8NGY3 331 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms