RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 UQCC1Q9NVA1 299 aa3.59□□□□□ -1.84
UBR3-202ENST00000392632 ZNF230Q9UIE0 474 aaPredicted RBP3.59□□□□□ -1.84
UBR3-202ENST00000392632 ADGRB1O14514 1584 aa3.59□□□□□ -1.84
UBR3-202ENST00000392632 MROH1Q8NDA8 1641 aa3.59□□□□□ -1.84
UBR3-202ENST00000392632 C9orf172C9J069 976 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 G3V2L1 256 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 OR2F2O95006 317 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 SLC25A5P05141 298 aaKnown RBP3.58□□□□□ -1.84
UBR3-202ENST00000392632 TFAP2AP05549 437 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 HOXC4P09017 264 aaPredicted RBP3.58□□□□□ -1.84
UBR3-202ENST00000392632 SNRPBP14678 240 aaKnown RBP3.58□□□□□ -1.84
UBR3-202ENST00000392632 ZNF17P17021 662 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 ACP1P24666 158 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 PCSK6P29122 969 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 TSPOP30536 169 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 TPPP2P59282 170 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 ZNF816Q0VGE8 651 aaPredicted RBP3.58□□□□□ -1.84
UBR3-202ENST00000392632 OR2F1Q13607 317 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 ZNF343Q6P1L6 599 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 DHRS11Q6UWP2 260 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 ZNF705AQ6ZN79 300 aaPredicted RBP3.58□□□□□ -1.84
UBR3-202ENST00000392632 ARRDC1Q8N5I2 433 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 SYT8Q8NBV8 401 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 ZNF485Q8NCK3 441 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 TMEM116Q8NCL8 245 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 NOXO1Q8NFA2 376 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 PTP4A1Q93096 173 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 RAB40CQ96S21 281 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 NPAS1Q99742 590 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 BANF2Q9H503 90 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 ZNF665Q9H7R5 613 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 BCL2L10Q9HD36 194 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 LHX9Q9NQ69 397 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 MBNL1Q9NR56 388 aaKnown RBP3.58□□□□□ -1.84
UBR3-202ENST00000392632 RBFOX1Q9NWB1 397 aaKnown RBP3.58□□□□□ -1.84
UBR3-202ENST00000392632 ZNF446Q9NWS9 450 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 PLA2G3Q9NZ20 509 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 GDF2Q9UK05 429 aaPredicted RBP3.58□□□□□ -1.84
UBR3-202ENST00000392632 VSIG4Q9Y279 399 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 COL14A1Q05707 1796 aaKnown RBP3.58□□□□□ -1.84
UBR3-202ENST00000392632 CACNA1EQ15878 2313 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 IGLV3-10A0A075B6K4 115 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 CIDEAO60543 219 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 HIST1H1BP16401 226 aaKnown RBP3.58□□□□□ -1.84
UBR3-202ENST00000392632 GPX2P18283 190 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 CD40P25942 277 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 COMPP49747 757 aaPredicted RBP3.58□□□□□ -1.84
UBR3-202ENST00000392632 PPP1CBP62140 327 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 JAG1P78504 1218 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 MRPS11P82912 194 aaKnown RBP3.58□□□□□ -1.84
UBR3-202ENST00000392632 TAGLNQ01995 201 aaKnown RBP3.58□□□□□ -1.84
UBR3-202ENST00000392632 FOXO1Q12778 655 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 HLXQ14774 488 aaPredicted RBP3.58□□□□□ -1.84
UBR3-202ENST00000392632 AGERQ15109 404 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 ZNF141Q15928 474 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 OR2B11Q5JQS5 317 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 STPG1Q5TH74 334 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 PRR27Q6MZM9 219 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 H3F3CQ6NXT2 135 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 INO80CQ6PI98 192 aaPredicted RBP3.58□□□□□ -1.84
UBR3-202ENST00000392632 PLPP7Q8NBV4 271 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 ADPRHL1Q8NDY3 354 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 OR5M8Q8NGP6 311 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 PRSS3P2Q8NHM4 247 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 PTPMT1Q8WUK0 201 aaPredicted RBP3.58□□□□□ -1.84
UBR3-202ENST00000392632 RTN4IP1Q8WWV3 396 aaPredicted RBP3.58□□□□□ -1.84
UBR3-202ENST00000392632 EXTL1Q92935 676 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 STARD4Q96DR4 205 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 DUS3LQ96G46 650 aaKnown RBP3.58□□□□□ -1.84
UBR3-202ENST00000392632 SEC22AQ96IW7 307 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 LINC00615Q96LM1 132 aaPredicted RBP3.58□□□□□ -1.84
UBR3-202ENST00000392632 SIGLEC11Q96RL6 698 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 SMIM7Q9BQ49 75 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 SF3B5Q9BWJ5 86 aaKnown RBP3.58□□□□□ -1.84
UBR3-202ENST00000392632 C12orf10Q9HB07 376 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 TAF9BQ9HBM6 251 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 DCAF16Q9NXF7 216 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 CLCF1Q9UBD9 225 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 NAGKQ9UJ70 344 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 SPTBN1Q01082 2364 aaKnown RBP3.58□□□□□ -1.84
UBR3-202ENST00000392632 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.58□□□□□ -1.84
UBR3-202ENST00000392632 TMEM129A0AVI4 362 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 FGF17O60258 216 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 ICOSLGO75144 302 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 ONECUT2O95948 504 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 FAM106CPP0CH98 169 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 SPI1P17947 270 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 SOX8P57073 446 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 NXPH1P58417 271 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 RAC3P60763 192 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 ROM1Q03395 351 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 PLAURQ03405 335 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 RPL18Q07020 188 aaKnown RBP3.58□□□□□ -1.84
UBR3-202ENST00000392632 FOXF1Q12946 379 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 P2RY6Q15077 328 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 ZNF787Q6DD87 383 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 ZNF793Q6ZN11 406 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 LYG2Q86SG7 212 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 MRAP2Q96G30 205 aa3.58□□□□□ -1.84
UBR3-202ENST00000392632 ALKBH3Q96Q83 286 aaPredicted RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms