RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 ELF3P78545 371 aaPredicted RBP2.18□□□□□ -2.06
SNORA40.2-201ENST00000390847 C5orf64Q2M2E5 130 aa2.18□□□□□ -2.06
SNORA40.2-201ENST00000390847 TMEM136Q6ZRR5 245 aa2.18□□□□□ -2.06
SNORA40.2-201ENST00000390847 CMTM8Q8IZV2 173 aa2.18□□□□□ -2.06
SNORA40.2-201ENST00000390847 ORMDL3Q8N138 153 aa2.18□□□□□ -2.06
SNORA40.2-201ENST00000390847 SLC25A29Q8N8R3 303 aa2.18□□□□□ -2.06
SNORA40.2-201ENST00000390847 OR1S1Q8NH92 325 aa2.18□□□□□ -2.06
SNORA40.2-201ENST00000390847 GPX8Q8TED1 209 aa2.18□□□□□ -2.06
SNORA40.2-201ENST00000390847 ISOC2Q96AB3 205 aa2.18□□□□□ -2.06
SNORA40.2-201ENST00000390847 RDH12Q96NR8 316 aa2.18□□□□□ -2.06
SNORA40.2-201ENST00000390847 CSPG4P5Q96PW8 444 aa2.18□□□□□ -2.06
SNORA40.2-201ENST00000390847 ALS2CR12Q96Q35 445 aa2.18□□□□□ -2.06
SNORA40.2-201ENST00000390847 AGMATQ9BSE5 352 aa2.18□□□□□ -2.06
SNORA40.2-201ENST00000390847 ANGPTL4Q9BY76 406 aa2.18□□□□□ -2.06
SNORA40.2-201ENST00000390847 LINC00574Q9H8X3 128 aa2.18□□□□□ -2.06
SNORA40.2-201ENST00000390847 RWDD2AQ9UIY3 292 aa2.18□□□□□ -2.06
SNORA40.2-201ENST00000390847 NDRG2Q9UN36 371 aaKnown RBP2.18□□□□□ -2.06
SNORA40.2-201ENST00000390847 VGLL3A8MV65 326 aa2.17□□□□□ -2.06
SNORA40.2-201ENST00000390847 A8MWL6 223 aa2.17□□□□□ -2.06
SNORA40.2-201ENST00000390847 MYL12BO14950 172 aa2.17□□□□□ -2.06
SNORA40.2-201ENST00000390847 IGLV7-43P04211 117 aa2.17□□□□□ -2.06
SNORA40.2-201ENST00000390847 ASGR1P07306 291 aa2.17□□□□□ -2.06
SNORA40.2-201ENST00000390847 CD34P28906 385 aa2.17□□□□□ -2.06
SNORA40.2-201ENST00000390847 ERFP50548 548 aa2.17□□□□□ -2.06
SNORA40.2-201ENST00000390847 KLHL40Q2TBA0 621 aa2.17□□□□□ -2.06
SNORA40.2-201ENST00000390847 MLIPQ5VWP3 458 aa2.17□□□□□ -2.06
SNORA40.2-201ENST00000390847 KDM4DQ6B0I6 523 aa2.17□□□□□ -2.06
SNORA40.2-201ENST00000390847 NDUFAF7Q7L592 441 aa2.17□□□□□ -2.06
SNORA40.2-201ENST00000390847 OTUD6AQ7L8S5 288 aa2.17□□□□□ -2.06
SNORA40.2-201ENST00000390847 SFXN5Q8TD22 340 aa2.17□□□□□ -2.06
SNORA40.2-201ENST00000390847 GLYATL2Q8WU03 294 aa2.17□□□□□ -2.06
SNORA40.2-201ENST00000390847 S100PBPQ96BU1 408 aa2.17□□□□□ -2.06
SNORA40.2-201ENST00000390847 SNF8Q96H20 258 aa2.17□□□□□ -2.06
SNORA40.2-201ENST00000390847 C8orf33Q9H7E9 229 aaPredicted RBP2.17□□□□□ -2.06
SNORA40.2-201ENST00000390847 CHRAC1Q9NRG0 131 aa2.17□□□□□ -2.06
SNORA40.2-201ENST00000390847 HEBP1Q9NRV9 189 aa2.17□□□□□ -2.06
SNORA40.2-201ENST00000390847 IL37Q9NZH6 218 aa2.17□□□□□ -2.06
SNORA40.2-201ENST00000390847 HACD1B0YJ81 288 aa2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 CCDC22O60826 627 aa2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 UPK1BO75841 260 aa2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 LCA5LO95447 670 aa2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 MMP7P09237 267 aaPredicted RBP2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 TACSTD2P09758 323 aa2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 NELFEP18615 380 aaKnown RBP2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 CXCR1P25024 350 aa2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 GABRR2P28476 465 aa2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 PRSS3P35030 304 aa2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 CLDN6P56747 220 aa2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 RAB11AP62491 216 aa2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 INCA1Q0VD86 236 aa2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 FAM53BQ14153 422 aa2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 TSC22D1Q15714 1073 aa2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 RAB11BQ15907 218 aa2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 SPIN3Q5JUX0 258 aa2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 HHATQ5VTY9 493 aa2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 STEAP4Q687X5 459 aa2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 TBPL2Q6SJ96 375 aa2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 TMCO2Q7Z6W1 182 aaPredicted RBP2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 DAZ4Q86SG3 579 aaKnown RBP2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 BBS7Q8IWZ6 715 aa2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 AGR3Q8TD06 166 aa2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 PIH1D2Q8WWB5 315 aa2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 Q96MT0 163 aa2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 TMEM175Q9BSA9 504 aa2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 PLEKHF2Q9H8W4 249 aa2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 DAZ1Q9NQZ3 744 aaKnown RBP2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 TMEM100Q9NV29 134 aa2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 ZNF391Q9UJN7 358 aa2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 CES1P1Q9UKY3 287 aa2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 OR51B2Q9Y5P1 312 aa2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 PHLPP2Q6ZVD8 1323 aa2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 ADGRA3Q8IWK6 1321 aa2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 WDR19Q8NEZ3 1342 aa2.16□□□□□ -2.06
SNORA40.2-201ENST00000390847 LOC102724200A0A096LPH7 203 aaPredicted RBP2.15□□□□□ -2.07
SNORA40.2-201ENST00000390847 CCL15-CCL14A0A0B4J2E2 113 aa2.15□□□□□ -2.07
SNORA40.2-201ENST00000390847 SLC22A20A6NK97 555 aa2.15□□□□□ -2.07
SNORA40.2-201ENST00000390847 LINC01619G3V211 115 aa2.15□□□□□ -2.07
SNORA40.2-201ENST00000390847 CLDN34H7C241 214 aa2.15□□□□□ -2.07
SNORA40.2-201ENST00000390847 AKR7A2O43488 359 aa2.15□□□□□ -2.07
SNORA40.2-201ENST00000390847 PFN1P07737 140 aaKnown RBP2.15□□□□□ -2.07
SNORA40.2-201ENST00000390847 STAG3L3P0CL85 134 aa2.15□□□□□ -2.07
SNORA40.2-201ENST00000390847 PMCHP20382 165 aa2.15□□□□□ -2.07
SNORA40.2-201ENST00000390847 ARL2P36404 184 aa2.15□□□□□ -2.07
SNORA40.2-201ENST00000390847 PSMD4P55036 377 aaKnown RBP2.15□□□□□ -2.07
SNORA40.2-201ENST00000390847 PAFAH1B2P68402 229 aa2.15□□□□□ -2.07
SNORA40.2-201ENST00000390847 CCL15Q16663 113 aa2.15□□□□□ -2.07
SNORA40.2-201ENST00000390847 TPRG1LQ5T0D9 272 aa2.15□□□□□ -2.07
SNORA40.2-201ENST00000390847 TTC19Q6DKK2 380 aaPredicted RBP2.15□□□□□ -2.07
SNORA40.2-201ENST00000390847 THOC7Q6I9Y2 204 aaKnown RBP2.15□□□□□ -2.07
SNORA40.2-201ENST00000390847 WDR31Q8NA23 367 aa2.15□□□□□ -2.07
SNORA40.2-201ENST00000390847 PROKR2Q8NFJ6 384 aa2.15□□□□□ -2.07
SNORA40.2-201ENST00000390847 OR52N1Q8NH53 320 aa2.15□□□□□ -2.07
SNORA40.2-201ENST00000390847 ING5Q8WYH8 240 aa2.15□□□□□ -2.07
SNORA40.2-201ENST00000390847 NAT6Q93015 286 aa2.15□□□□□ -2.07
SNORA40.2-201ENST00000390847 CERS2Q96G23 380 aa2.15□□□□□ -2.07
SNORA40.2-201ENST00000390847 FAM19A4Q96LR4 140 aa2.15□□□□□ -2.07
SNORA40.2-201ENST00000390847 NAPGQ99747 312 aaPredicted RBP2.15□□□□□ -2.07
SNORA40.2-201ENST00000390847 TBL1XR1Q9BZK7 514 aa2.15□□□□□ -2.07
SNORA40.2-201ENST00000390847 RAB22AQ9UL26 194 aa2.15□□□□□ -2.07
SNORA40.2-201ENST00000390847 TSPOAP1O95153 1857 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms