RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 KNG1P01042 644 aa12.46□□□□□ -0.42
CLCNKA-202ENST00000375692 DAP3P51398 398 aaKnown RBP12.46□□□□□ -0.42
CLCNKA-202ENST00000375692 MFAP5Q13361 173 aa12.46□□□□□ -0.42
CLCNKA-202ENST00000375692 PMS2CLQ68D20 193 aa12.46□□□□□ -0.42
CLCNKA-202ENST00000375692 DHRS11Q6UWP2 260 aa12.46□□□□□ -0.42
CLCNKA-202ENST00000375692 SLC16A13Q7RTY0 426 aa12.46□□□□□ -0.42
CLCNKA-202ENST00000375692 GALNTL5Q7Z4T8 443 aa12.46□□□□□ -0.42
CLCNKA-202ENST00000375692 ABHD12BQ7Z5M8 362 aaPredicted RBP12.46□□□□□ -0.42
CLCNKA-202ENST00000375692 NAA40Q86UY6 237 aa12.46□□□□□ -0.42
CLCNKA-202ENST00000375692 GKN2Q86XP6 184 aa12.46□□□□□ -0.42
CLCNKA-202ENST00000375692 ARRDC1Q8N5I2 433 aa12.46□□□□□ -0.42
CLCNKA-202ENST00000375692 FBXO17Q96EF6 278 aa12.46□□□□□ -0.42
CLCNKA-202ENST00000375692 C14orf79Q96F83 325 aa12.46□□□□□ -0.42
CLCNKA-202ENST00000375692 AKR1E2Q96JD6 320 aa12.46□□□□□ -0.42
CLCNKA-202ENST00000375692 C2orf50Q96LR7 162 aa12.46□□□□□ -0.42
CLCNKA-202ENST00000375692 EDARQ9UNE0 448 aa12.46□□□□□ -0.42
CLCNKA-202ENST00000375692 SRPK3Q9UPE1 567 aa12.46□□□□□ -0.42
CLCNKA-202ENST00000375692 PMS2P1A4D2B8 440 aa12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 PATE3B3GLJ2 98 aa12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 LMO7DNF2Z398 122 aa12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 TO15178 435 aa12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 HCKP08631 526 aa12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 FCGR3AP08637 254 aa12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 OR3A2P47893 321 aa12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 GSK3AP49840 483 aa12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 P2RY4P51582 365 aa12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 SPEM2Q0P670 501 aa12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 SHBQ15464 509 aa12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 TGIF1Q15583 401 aa12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 FAM76BQ5HYJ3 339 aa12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 MISPQ8IVT2 679 aa12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 SAT2Q96F10 170 aaPredicted RBP12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 SULT4A1Q9BR01 284 aa12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 TMEM59Q9BXS4 323 aa12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 SMIM3Q9BZL3 60 aa12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 COPS7AQ9UBW8 275 aa12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 SUSD2Q9UGT4 822 aa12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 WIF1Q9Y5W5 379 aa12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 SCGNO76038 276 aa12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 CD5P06127 495 aa12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 GSTP1P09211 210 aaKnown RBP12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 OR8U9P0C7N5 309 aa12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 GIMD1P0DJR0 217 aa12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 HKR1P10072 659 aa12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 CLEC9AQ6UXN8 241 aa12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 WDR5BQ86VZ2 330 aa12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 OR1N1Q8NGS0 311 aa12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 OR8U1Q8NH10 309 aa12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 NPRL2Q8WTW4 380 aa12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 GPER1Q99527 375 aa12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 GPR84Q9NQS5 396 aa12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 FBLN5Q9UBX5 448 aa12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 LHFPL6Q9Y693 200 aa12.45□□□□□ -0.42
CLCNKA-202ENST00000375692 CCDC163A0A0D9SF12 145 aa12.44□□□□□ -0.42
CLCNKA-202ENST00000375692 RPS2P15880 293 aaKnown RBP12.44□□□□□ -0.42
CLCNKA-202ENST00000375692 ZNF17P17021 662 aa12.44□□□□□ -0.42
CLCNKA-202ENST00000375692 FPR2P25090 351 aa12.44□□□□□ -0.42
CLCNKA-202ENST00000375692 FBXW4P57775 412 aa12.44□□□□□ -0.42
CLCNKA-202ENST00000375692 CSNK2A1P68400 391 aaPredicted RBP12.44□□□□□ -0.42
CLCNKA-202ENST00000375692 IL15RAQ13261 267 aa12.44□□□□□ -0.42
CLCNKA-202ENST00000375692 BTNL8Q6UX41 500 aa12.44□□□□□ -0.42
CLCNKA-202ENST00000375692 C1QL2Q7Z5L3 287 aa12.44□□□□□ -0.42
CLCNKA-202ENST00000375692 PEG10Q86TG7 708 aaKnown RBP12.44□□□□□ -0.42
CLCNKA-202ENST00000375692 CSNK2A3Q8NEV1 391 aa12.44□□□□□ -0.42
CLCNKA-202ENST00000375692 KCNG3Q8TAE7 436 aa12.44□□□□□ -0.42
CLCNKA-202ENST00000375692 SECTM1Q8WVN6 248 aa12.44□□□□□ -0.42
CLCNKA-202ENST00000375692 DAZLQ92904 295 aaKnown RBP12.44□□□□□ -0.42
CLCNKA-202ENST00000375692 ZNF304Q9HCX3 659 aa12.44□□□□□ -0.42
CLCNKA-202ENST00000375692 EHFQ9NZC4 300 aa12.44□□□□□ -0.42
CLCNKA-202ENST00000375692 ANAPC10Q9UM13 185 aa12.44□□□□□ -0.42
CLCNKA-202ENST00000375692 POLR1DQ9Y2S0 133 aa12.44□□□□□ -0.42
CLCNKA-202ENST00000375692 UNC13CQ8NB66 2214 aa12.44□□□□□ -0.42
CLCNKA-202ENST00000375692 C5orf63A6NC05 138 aa12.44□□□□□ -0.42
CLCNKA-202ENST00000375692 CEACAM18A8MTB9 384 aa12.44□□□□□ -0.42
CLCNKA-202ENST00000375692 IFNA4P05014 189 aa12.44□□□□□ -0.42
CLCNKA-202ENST00000375692 HOXB1P14653 301 aaPredicted RBP12.44□□□□□ -0.42
CLCNKA-202ENST00000375692 SNU13P55769 128 aaKnown RBP12.44□□□□□ -0.42
CLCNKA-202ENST00000375692 ZP4Q12836 540 aa12.44□□□□□ -0.42
CLCNKA-202ENST00000375692 OR8B12Q8NGG6 310 aa12.44□□□□□ -0.42
CLCNKA-202ENST00000375692 KIRREL1Q96J84 757 aa12.44□□□□□ -0.42
CLCNKA-202ENST00000375692 OCSTAMPQ9BR26 566 aa12.44□□□□□ -0.42
CLCNKA-202ENST00000375692 NAA11Q9BSU3 229 aaPredicted RBP12.44□□□□□ -0.42
CLCNKA-202ENST00000375692 IER2Q9BTL4 223 aa12.44□□□□□ -0.42
CLCNKA-202ENST00000375692 CHST11Q9NPF2 352 aa12.44□□□□□ -0.42
CLCNKA-202ENST00000375692 PILRBQ9UKJ0 227 aa12.44□□□□□ -0.42
CLCNKA-202ENST00000375692 TLCD2A6NGC4 264 aa12.43□□□□□ -0.42
CLCNKA-202ENST00000375692 LINC00587B1AMM8 73 aa12.43□□□□□ -0.42
CLCNKA-202ENST00000375692 MFNGO00587 321 aa12.43□□□□□ -0.42
CLCNKA-202ENST00000375692 ZNF708P17019 499 aa12.43□□□□□ -0.42
CLCNKA-202ENST00000375692 FASLGP48023 281 aa12.43□□□□□ -0.42
CLCNKA-202ENST00000375692 PPT1P50897 306 aa12.43□□□□□ -0.42
CLCNKA-202ENST00000375692 ZNF121P58317 390 aaPredicted RBP12.43□□□□□ -0.42
CLCNKA-202ENST00000375692 CARD17Q5XLA6 110 aa12.43□□□□□ -0.42
CLCNKA-202ENST00000375692 Q6ZRG5 221 aa12.43□□□□□ -0.42
CLCNKA-202ENST00000375692 LHFPL1Q86WI0 220 aa12.43□□□□□ -0.42
CLCNKA-202ENST00000375692 SKA3Q8IX90 412 aa12.43□□□□□ -0.42
CLCNKA-202ENST00000375692 MFSD8Q8NHS3 518 aa12.43□□□□□ -0.42
CLCNKA-202ENST00000375692 NUDT16L1Q9BRJ7 211 aaKnown RBP12.43□□□□□ -0.42
CLCNKA-202ENST00000375692 SMCO4Q9NRQ5 59 aa12.43□□□□□ -0.42
CLCNKA-202ENST00000375692 OSGIN2Q9Y236 505 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms