RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 IGSF23A1L1A6 192 aa7.92□□□□□ -1.14
UBR4-201ENST00000375218 TTC24A2A3L6 582 aaPredicted RBP7.92□□□□□ -1.14
UBR4-201ENST00000375218 EFNA2O43921 213 aa7.92□□□□□ -1.14
UBR4-201ENST00000375218 MFSD11O43934 449 aa7.92□□□□□ -1.14
UBR4-201ENST00000375218 LRATO95237 230 aa7.92□□□□□ -1.14
UBR4-201ENST00000375218 CST2P09228 141 aa7.92□□□□□ -1.14
UBR4-201ENST00000375218 IRF1P10914 325 aa7.92□□□□□ -1.14
UBR4-201ENST00000375218 RPL22P35268 128 aaKnown RBP7.92□□□□□ -1.14
UBR4-201ENST00000375218 EXOSC7Q15024 291 aaKnown RBP7.92□□□□□ -1.14
UBR4-201ENST00000375218 DND1Q8IYX4 353 aaKnown RBP7.92□□□□□ -1.14
UBR4-201ENST00000375218 C8orf59Q8N0T1 100 aaPredicted RBP7.92□□□□□ -1.14
UBR4-201ENST00000375218 OR5M9Q8NGP3 310 aa7.92□□□□□ -1.14
UBR4-201ENST00000375218 OR6F1Q8NGZ6 308 aa7.92□□□□□ -1.14
UBR4-201ENST00000375218 FYTTD1Q96QD9 318 aaKnown RBP7.92□□□□□ -1.14
UBR4-201ENST00000375218 LHX3Q9UBR4 397 aa7.92□□□□□ -1.14
UBR4-201ENST00000375218 HSPB8Q9UJY1 196 aa7.92□□□□□ -1.14
UBR4-201ENST00000375218 PPIAL4CA0A0B4J2A2 164 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 LRRC30A6NM36 301 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 PRKNO60260 465 aaPredicted RBP7.91□□□□□ -1.14
UBR4-201ENST00000375218 IGLV3-27P01718 113 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 HPNP05981 417 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 RPL12P30050 165 aaKnown RBP7.91□□□□□ -1.14
UBR4-201ENST00000375218 KIR2DS4P43632 304 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 TAS2R38P59533 333 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 EMX1Q04741 257 aaPredicted RBP7.91□□□□□ -1.14
UBR4-201ENST00000375218 MAD2L1Q13257 205 aaPredicted RBP7.91□□□□□ -1.14
UBR4-201ENST00000375218 DCAF4L1Q3SXM0 396 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 CLNKQ7Z7G1 428 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 CROCCP2Q86T23 111 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 OR4E2Q8NGC2 313 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 HAVCR2Q8TDQ0 301 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 TADA1Q96BN2 335 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 POLDIP2Q9Y2S7 368 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 SLC22A23A1A5C7 686 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 SFTPBP07988 381 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 KITLGP21583 273 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 RFX2P48378 723 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 PSG4Q00888 419 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 DUSP2Q05923 314 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 UBXN2BQ14CS0 331 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 NKPD1Q17RQ9 610 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 SFT2D3Q587I9 215 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 OTUD3Q5T2D3 398 aaPredicted RBP7.91□□□□□ -1.14
UBR4-201ENST00000375218 UGT2A3Q6UWM9 527 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 MARCH9Q86YJ5 346 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 ADAD2Q8NCV1 583 aaKnown RBP7.91□□□□□ -1.14
UBR4-201ENST00000375218 OR4N2Q8NGD1 307 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 OR13C4Q8NGS5 318 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 MBD3L2Q8NHZ7 208 aaPredicted RBP7.91□□□□□ -1.14
UBR4-201ENST00000375218 WNT2BQ93097 391 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 RCC2Q9P258 522 aaKnown RBP7.91□□□□□ -1.14
UBR4-201ENST00000375218 METTL1Q9UBP6 276 aaKnown RBP7.91□□□□□ -1.14
UBR4-201ENST00000375218 DSPP15924 2871 aaKnown RBP7.91□□□□□ -1.14
UBR4-201ENST00000375218 WDR27A2RRH5 827 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 ATP5LO75964 103 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 LIMS3P0CW19 117 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 LIMS4P0CW20 117 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 AZU1P20160 251 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 RAB10P61026 200 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 SIRPAP78324 504 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 SPEM2Q0P670 501 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 NRF1Q16656 503 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 PYY3Q5JQD4 70 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 DOK3Q7L591 496 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 OR51F2Q8NH61 342 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 LRRC3BQ96PB8 259 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 EFCAB11Q9BUY7 163 aa7.91□□□□□ -1.14
UBR4-201ENST00000375218 THAP10Q9P2Z0 257 aaPredicted RBP7.91□□□□□ -1.14
UBR4-201ENST00000375218 GLYATL1P3A0A0U1RQE8 302 aa7.9□□□□□ -1.14
UBR4-201ENST00000375218 A0A1W2PRF3 423 aa7.9□□□□□ -1.14
UBR4-201ENST00000375218 A0A1W2PRM7 423 aa7.9□□□□□ -1.14
UBR4-201ENST00000375218 FAAHO00519 579 aa7.9□□□□□ -1.14
UBR4-201ENST00000375218 KLF8O95600 359 aaPredicted RBP7.9□□□□□ -1.14
UBR4-201ENST00000375218 ENGP17813 658 aa7.9□□□□□ -1.14
UBR4-201ENST00000375218 USF1P22415 310 aaPredicted RBP7.9□□□□□ -1.14
UBR4-201ENST00000375218 APOBEC1P41238 236 aaKnown RBP7.9□□□□□ -1.14
UBR4-201ENST00000375218 WNT4P56705 351 aa7.9□□□□□ -1.14
UBR4-201ENST00000375218 ZNF121P58317 390 aaPredicted RBP7.9□□□□□ -1.14
UBR4-201ENST00000375218 SRYQ05066 204 aa7.9□□□□□ -1.14
UBR4-201ENST00000375218 SLC10A1Q14973 349 aa7.9□□□□□ -1.14
UBR4-201ENST00000375218 UCN3Q969E3 161 aa7.9□□□□□ -1.14
UBR4-201ENST00000375218 MOB3AQ96BX8 217 aa7.9□□□□□ -1.14
UBR4-201ENST00000375218 FGGYQ96C11 551 aa7.9□□□□□ -1.14
UBR4-201ENST00000375218 GNRHR2Q96P88 292 aa7.9□□□□□ -1.14
UBR4-201ENST00000375218 DPAGT1Q9H3H5 408 aa7.9□□□□□ -1.14
UBR4-201ENST00000375218 SLC52A3Q9NQ40 469 aa7.9□□□□□ -1.14
UBR4-201ENST00000375218 RNF222A6NCQ9 220 aa7.9□□□□□ -1.14
UBR4-201ENST00000375218 CLDN24A6NM45 220 aa7.9□□□□□ -1.14
UBR4-201ENST00000375218 MPTX1A8MV57 137 aa7.9□□□□□ -1.14
UBR4-201ENST00000375218 A8MWP6 167 aa7.9□□□□□ -1.14
UBR4-201ENST00000375218 CLDN25C9JDP6 229 aa7.9□□□□□ -1.14
UBR4-201ENST00000375218 SNAPC5O75971 98 aa7.9□□□□□ -1.14
UBR4-201ENST00000375218 ESR1P03372 595 aa7.9□□□□□ -1.14
UBR4-201ENST00000375218 OR13C7P0DN81 318 aa7.9□□□□□ -1.14
UBR4-201ENST00000375218 ABOP16442 354 aa7.9□□□□□ -1.14
UBR4-201ENST00000375218 SSTR4P31391 388 aa7.9□□□□□ -1.14
UBR4-201ENST00000375218 CCR2P41597 374 aa7.9□□□□□ -1.14
UBR4-201ENST00000375218 ZNF133P52736 654 aaPredicted RBP7.9□□□□□ -1.14
UBR4-201ENST00000375218 AQP4P55087 323 aa7.9□□□□□ -1.14
UBR4-201ENST00000375218 SNRPD2P62316 118 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms