RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 RFC3P40938 356 aa1.28□□□□□ -2.2
RNU6-553P-201ENST00000364047 HADHQ16836 314 aaKnown RBP1.28□□□□□ -2.2
RNU6-553P-201ENST00000364047 HSDL1Q3SXM5 330 aa1.28□□□□□ -2.2
RNU6-553P-201ENST00000364047 SFXN5Q8TD22 340 aa1.28□□□□□ -2.2
RNU6-553P-201ENST00000364047 YIPF6Q96EC8 236 aa1.28□□□□□ -2.2
RNU6-553P-201ENST00000364047 ALS2CR12Q96Q35 445 aa1.28□□□□□ -2.2
RNU6-553P-201ENST00000364047 CALN1Q9BXU9 219 aa1.28□□□□□ -2.2
RNU6-553P-201ENST00000364047 TBL1XR1Q9BZK7 514 aa1.28□□□□□ -2.2
RNU6-553P-201ENST00000364047 UCK2Q9BZX2 261 aa1.28□□□□□ -2.2
RNU6-553P-201ENST00000364047 SLC7A5P2Q9GIP4 190 aa1.28□□□□□ -2.2
RNU6-553P-201ENST00000364047 CES1P1Q9UKY3 287 aa1.28□□□□□ -2.2
RNU6-553P-201ENST00000364047 RCL1Q9Y2P8 373 aaKnown RBP1.28□□□□□ -2.2
RNU6-553P-201ENST00000364047 CAB39Q9Y376 341 aaPredicted RBP1.28□□□□□ -2.2
RNU6-553P-201ENST00000364047 BAZ2AQ9UIF9 1905 aaKnown RBP1.28□□□□□ -2.2
RNU6-553P-201ENST00000364047 SSH2Q76I76 1423 aa1.27□□□□□ -2.21
RNU6-553P-201ENST00000364047 TMEM72A0PK05 275 aa1.27□□□□□ -2.21
RNU6-553P-201ENST00000364047 H3BQ85 93 aa1.27□□□□□ -2.21
RNU6-553P-201ENST00000364047 FARS2O95363 451 aaKnown RBP1.27□□□□□ -2.21
RNU6-553P-201ENST00000364047 CTSGP08311 255 aa1.27□□□□□ -2.21
RNU6-553P-201ENST00000364047 RAB5AP20339 215 aa1.27□□□□□ -2.21
RNU6-553P-201ENST00000364047 PRPS1L1P21108 318 aa1.27□□□□□ -2.21
RNU6-553P-201ENST00000364047 IL3RAP26951 378 aa1.27□□□□□ -2.21
RNU6-553P-201ENST00000364047 PRSS3P35030 304 aa1.27□□□□□ -2.21
RNU6-553P-201ENST00000364047 RGS6P49758 472 aa1.27□□□□□ -2.21
RNU6-553P-201ENST00000364047 SERPINB8P50452 374 aa1.27□□□□□ -2.21
RNU6-553P-201ENST00000364047 FOXA1P55317 472 aa1.27□□□□□ -2.21
RNU6-553P-201ENST00000364047 ZNF181Q2M3W8 571 aa1.27□□□□□ -2.21
RNU6-553P-201ENST00000364047 CCDC183Q5T5S1 534 aa1.27□□□□□ -2.21
RNU6-553P-201ENST00000364047 MRPL2Q5T653 305 aaKnown RBP1.27□□□□□ -2.21
RNU6-553P-201ENST00000364047 METAP1DQ6UB28 335 aaPredicted RBP1.27□□□□□ -2.21
RNU6-553P-201ENST00000364047 ZFP62Q8NB50 900 aaPredicted RBP1.27□□□□□ -2.21
RNU6-553P-201ENST00000364047 RAB1CQ92928 201 aa1.27□□□□□ -2.21
RNU6-553P-201ENST00000364047 RASD2Q96D21 266 aa1.27□□□□□ -2.21
RNU6-553P-201ENST00000364047 SNF8Q96H20 258 aa1.27□□□□□ -2.21
RNU6-553P-201ENST00000364047 PEBP4Q96S96 227 aa1.27□□□□□ -2.21
RNU6-553P-201ENST00000364047 SORL1Q92673 2214 aa1.27□□□□□ -2.21
RNU6-553P-201ENST00000364047 COL11A1P12107 1806 aaPredicted RBP1.26□□□□□ -2.21
RNU6-553P-201ENST00000364047 CIB2O75838 187 aa1.26□□□□□ -2.21
RNU6-553P-201ENST00000364047 PRB1P04280 392 aa1.26□□□□□ -2.21
RNU6-553P-201ENST00000364047 CSRP1P21291 193 aaKnown RBP1.26□□□□□ -2.21
RNU6-553P-201ENST00000364047 OR1G1P47890 313 aa1.26□□□□□ -2.21
RNU6-553P-201ENST00000364047 ERFP50548 548 aa1.26□□□□□ -2.21
RNU6-553P-201ENST00000364047 TSC22D1Q15714 1073 aa1.26□□□□□ -2.21
RNU6-553P-201ENST00000364047 TRMT5Q32P41 509 aaKnown RBP1.26□□□□□ -2.21
RNU6-553P-201ENST00000364047 KRTAP21-3Q3LHN1 58 aa1.26□□□□□ -2.21
RNU6-553P-201ENST00000364047 KDM4DQ6B0I6 523 aa1.26□□□□□ -2.21
RNU6-553P-201ENST00000364047 ZYG11AQ6WRX3 759 aa1.26□□□□□ -2.21
RNU6-553P-201ENST00000364047 VKORC1L1Q8N0U8 176 aa1.26□□□□□ -2.21
RNU6-553P-201ENST00000364047 RNF10Q8N5U6 811 aaKnown RBP1.26□□□□□ -2.21
RNU6-553P-201ENST00000364047 EIF4E3Q8N5X7 224 aaKnown RBP1.26□□□□□ -2.21
RNU6-553P-201ENST00000364047 C8orf44Q96CB5 159 aa1.26□□□□□ -2.21
RNU6-553P-201ENST00000364047 GPR21Q99679 349 aa1.26□□□□□ -2.21
RNU6-553P-201ENST00000364047 SND1-IT1Q9HBX3 110 aa1.26□□□□□ -2.21
RNU6-553P-201ENST00000364047 FAM60AQ9NP50 221 aa1.26□□□□□ -2.21
RNU6-553P-201ENST00000364047 LYARQ9NX58 379 aaKnown RBP1.26□□□□□ -2.21
RNU6-553P-201ENST00000364047 SPATA31E1Q6ZUB1 1445 aa1.25□□□□□ -2.21
RNU6-553P-201ENST00000364047 OR2AG2A6NM03 316 aa1.25□□□□□ -2.21
RNU6-553P-201ENST00000364047 ENTPD6O75354 484 aa1.25□□□□□ -2.21
RNU6-553P-201ENST00000364047 OR2F2O95006 317 aa1.25□□□□□ -2.21
RNU6-553P-201ENST00000364047 ZNF708P17019 499 aa1.25□□□□□ -2.21
RNU6-553P-201ENST00000364047 ATP5G2Q06055 141 aa1.25□□□□□ -2.21
RNU6-553P-201ENST00000364047 C2orf54Q08AI8 447 aa1.25□□□□□ -2.21
RNU6-553P-201ENST00000364047 CUL2Q13617 745 aa1.25□□□□□ -2.21
RNU6-553P-201ENST00000364047 MAPRE2Q15555 327 aa1.25□□□□□ -2.21
RNU6-553P-201ENST00000364047 OR1Q1Q15612 314 aa1.25□□□□□ -2.21
RNU6-553P-201ENST00000364047 KLHL40Q2TBA0 621 aa1.25□□□□□ -2.21
RNU6-553P-201ENST00000364047 ALKBH6Q3KRA9 238 aa1.25□□□□□ -2.21
RNU6-553P-201ENST00000364047 LGALSLQ3ZCW2 172 aaPredicted RBP1.25□□□□□ -2.21
RNU6-553P-201ENST00000364047 CEP55Q53EZ4 464 aa1.25□□□□□ -2.21
RNU6-553P-201ENST00000364047 WDR82Q6UXN9 313 aa1.25□□□□□ -2.21
RNU6-553P-201ENST00000364047 ITLN2Q8WWU7 325 aaPredicted RBP1.25□□□□□ -2.21
RNU6-553P-201ENST00000364047 ZNF606Q8WXB4 792 aa1.25□□□□□ -2.21
RNU6-553P-201ENST00000364047 ZNF75AQ96N20 296 aa1.25□□□□□ -2.21
RNU6-553P-201ENST00000364047 DERL3Q96Q80 235 aa1.25□□□□□ -2.21
RNU6-553P-201ENST00000364047 TGS1Q96RS0 853 aaKnown RBP1.25□□□□□ -2.21
RNU6-553P-201ENST00000364047 ZNF160Q9HCG1 818 aa1.25□□□□□ -2.21
RNU6-553P-201ENST00000364047 TMEM106BQ9NUM4 274 aa1.25□□□□□ -2.21
RNU6-553P-201ENST00000364047 PTTG3PQ9NZH4 202 aa1.25□□□□□ -2.21
RNU6-553P-201ENST00000364047 ZNF257Q9Y2Q1 563 aa1.25□□□□□ -2.21
RNU6-553P-201ENST00000364047 KIAA1671Q9BY89 1806 aa1.24□□□□□ -2.21
RNU6-553P-201ENST00000364047 BAHCC1Q9P281 2608 aa1.24□□□□□ -2.21
RNU6-553P-201ENST00000364047 PRR14LQ5THK1 2151 aa1.24□□□□□ -2.21
RNU6-553P-201ENST00000364047 IGKV1OR2-108A0A075B7D4 117 aa1.24□□□□□ -2.21
RNU6-553P-201ENST00000364047 A0A0G2JMP0 313 aa1.24□□□□□ -2.21
RNU6-553P-201ENST00000364047 A0A0X1KG70 313 aa1.24□□□□□ -2.21
RNU6-553P-201ENST00000364047 A0A1W2PNM2 257 aa1.24□□□□□ -2.21
RNU6-553P-201ENST00000364047 GOLGA8OA6NCC3 632 aa1.24□□□□□ -2.21
RNU6-553P-201ENST00000364047 GOLGA8NF8WBI6 632 aa1.24□□□□□ -2.21
RNU6-553P-201ENST00000364047 ERI3O43414 337 aaKnown RBP1.24□□□□□ -2.21
RNU6-553P-201ENST00000364047 CTNSO60931 367 aa1.24□□□□□ -2.21
RNU6-553P-201ENST00000364047 CDH16O75309 829 aa1.24□□□□□ -2.21
RNU6-553P-201ENST00000364047 SLC35G6P0C7Q6 338 aa1.24□□□□□ -2.21
RNU6-553P-201ENST00000364047 CXCR1P25024 350 aa1.24□□□□□ -2.21
RNU6-553P-201ENST00000364047 UQCRFS1P47985 274 aa1.24□□□□□ -2.21
RNU6-553P-201ENST00000364047 AP1S2P56377 157 aa1.24□□□□□ -2.21
RNU6-553P-201ENST00000364047 DEFB103AP81534 67 aa1.24□□□□□ -2.21
RNU6-553P-201ENST00000364047 INCA1Q0VD86 236 aa1.24□□□□□ -2.21
RNU6-553P-201ENST00000364047 TFDP2Q14188 446 aa1.24□□□□□ -2.21
RNU6-553P-201ENST00000364047 PCOTHQ58A44 107 aa1.24□□□□□ -2.21
RNU6-553P-201ENST00000364047 OR2T5Q6IEZ7 315 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms