RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 IL23AQ9NPF7 189 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 GDE1Q9NZC3 331 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 NTMQ9P121 344 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 ADAMTS5Q9UNA0 930 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 A4GNTQ9UNA3 340 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 GEMIN2O14893 280 aaKnown RBP12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 CD38P28907 300 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 PXNP49023 591 aaPredicted RBP12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 GNG4P50150 75 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 SHBQ15464 509 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 VWA2Q5GFL6 755 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 DMRTC1Q5HYR2 192 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 PRSS3P2Q8NHM4 247 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 DECR2Q9NUI1 292 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 V9GYH0 126 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 IGHV3-64DA0A0J9YX35 117 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 ANKRD20A5PA0PJZ0 165 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 FAM24AA6NFZ4 105 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 M0R2Z0 102 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 TNFRSF10CO14798 259 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 EDIL3O43854 480 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 HEXAP06865 529 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 ZBTB25P24278 435 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 BSXQ3C1V8 233 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 LGALSLQ3ZCW2 172 aaPredicted RBP12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 UTP23Q9BRU9 249 aaKnown RBP12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 C12orf49Q9H741 205 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 NAT8Q9UHE5 227 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 PIK3C2AO00443 1686 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 DNAJC25-GNG10A0A024R161 153 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 ZBTB42B2RXF5 422 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 IGF2P01344 180 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 INHBBP09529 407 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 PGA3P0DJD8 388 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 ZNF121P58317 390 aaPredicted RBP12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 ACSM6Q6P461 480 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 OR10A7Q8NGE5 316 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 S1PR3Q99500 378 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 KIR3DX1Q9H7L2 352 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 LSM2Q9Y333 95 aaKnown RBP12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 LIPGQ9Y5X9 500 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 UPK1AO00322 258 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 ADAM20O43506 726 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 CD22P20273 847 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 EMDP50402 254 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 AGFG1P52594 562 aaKnown RBP12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 METRNLQ641Q3 311 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 FAM109BQ6ICB4 259 aaPredicted RBP12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 ETV3LQ6ZN32 361 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 LSRQ86X29 649 aaPredicted RBP12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 TP53I13Q8NBR0 393 aaPredicted RBP12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 LRFN3Q9BTN0 628 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 TMEM191AQ9H0A3 160 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 SLC6A13Q9NSD5 602 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 B9D1Q9UPM9 204 aa12.08□□□□□ -0.48
CCDC144A-203ENST00000360495 COL2A1P02458 1487 aaPredicted RBP12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 CTAG2O75638 210 aa12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 VAMP5O95183 116 aa12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 BSGP35613 385 aa12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 FGF8P55075 233 aaPredicted RBP12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 TMEM33P57088 247 aa12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 RPS16P62249 146 aaKnown RBP12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 SLC38A11Q08AI6 406 aa12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 KCNAB1Q14722 419 aa12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 STARD4Q96DR4 205 aa12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 CXCL16Q9H2A7 254 aa12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 CACFD1Q9UGQ2 172 aa12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 LRRC30A6NM36 301 aa12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 RRP8O43159 456 aaKnown RBP12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 SPRY1O43609 319 aaPredicted RBP12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 FKBP2P26885 142 aaKnown RBP12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 LGALS4P56470 323 aa12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 Q7L0L9 218 aa12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 FBXL6Q8N531 539 aa12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 OR11H7Q8NGC8 314 aa12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 THOC3Q96J01 351 aaKnown RBP12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 WDR61Q9GZS3 305 aaKnown RBP12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 RALYQ9UKM9 306 aaKnown RBP12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 AMDHD2Q9Y303 409 aa12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 WNT11O96014 354 aa12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 HAAOP46952 286 aa12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 LIMK1P53667 647 aa12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 PPIAP62937 165 aaKnown RBP12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 OR2C3Q8N628 320 aa12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 DUSP23Q9BVJ7 150 aa12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 SELEP16581 610 aa12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 HTR1DP28221 377 aa12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 DLK1P80370 383 aa12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 IL10RAQ13651 578 aa12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 IL13RA2Q14627 380 aa12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 OR5M9Q8NGP3 310 aa12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 ATP5SQ99766 215 aa12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 VN1R1Q9GZP7 353 aa12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 RAB33BQ9H082 229 aa12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 IL20Q9NYY1 176 aa12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 CICQ96RK0 1608 aaPredicted RBP12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 CCDC88AQ3V6T2 1871 aa12.07□□□□□ -0.48
CCDC144A-203ENST00000360495 A0A1W2PNR3 127 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 IGHA1P01876 353 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 RLN3Q8WXF3 142 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms