RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 C2CD4DB7Z1M9 353 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 ZNF814B7Z6K7 855 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 PGA4P0DJD7 388 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 PGA3P0DJD8 388 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 LIPCP11150 499 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 TDGF1P13385 188 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 RAB32Q13637 225 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 HAGHQ16775 308 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 ACTBL2Q562R1 376 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 NKAPLQ5M9Q1 402 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 THEM4Q5T1C6 240 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 MARCH3Q86UD3 253 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 NAA40Q86UY6 237 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 ZNF761Q86XN6 746 aaPredicted RBP4.77□□□□□ -1.65
VPS50-202ENST00000305866 OR10R2Q8NGX6 335 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 OR6X1Q8NH79 312 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 OR10G6Q8NH81 332 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 WDR54Q9H977 334 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 CHMP1AQ9HD42 196 aaPredicted RBP4.77□□□□□ -1.65
VPS50-202ENST00000305866 KIAA2026Q5HYC2 2103 aa4.77□□□□□ -1.65
VPS50-202ENST00000305866 ARHGAP21Q5T5U3 1957 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 A0A087WZY1 265 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 HSD17B6O14756 317 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 DNPH1O43598 174 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 PIAS2O75928 621 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 GSTP1P09211 210 aaKnown RBP4.76□□□□□ -1.65
VPS50-202ENST00000305866 GLB1P16278 677 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 FPR2P25090 351 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 CCKBRP32239 447 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 SLC16A1P53985 500 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 DVL1P1P54792 670 aaPredicted RBP4.76□□□□□ -1.65
VPS50-202ENST00000305866 LSM6P62312 80 aaKnown RBP4.76□□□□□ -1.65
VPS50-202ENST00000305866 SMAD4Q13485 552 aaKnown RBP4.76□□□□□ -1.65
VPS50-202ENST00000305866 C4orf46Q504U0 113 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 ARMC6Q6NXE6 501 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 Q6ZS49 121 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 TRAPPC6BQ86SZ2 158 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 OR4D5Q8NGN0 318 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 TERB2Q8NHR7 220 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 PAQR8Q8TEZ7 354 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 CCDC107Q8WV48 283 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 C14orf144Q96I85 54 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 SMAD5Q99717 465 aaKnown RBP4.76□□□□□ -1.65
VPS50-202ENST00000305866 VN1R1Q9GZP7 353 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 CHST11Q9NPF2 352 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 CDV3Q9UKY7 258 aaKnown RBP4.76□□□□□ -1.65
VPS50-202ENST00000305866 MCTS1Q9ULC4 181 aaKnown RBP4.76□□□□□ -1.65
VPS50-202ENST00000305866 HS3ST3B1Q9Y662 390 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 MTCH2Q9Y6C9 303 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 CCDC163A0A0D9SF12 145 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 A0A0U1RQV5 110 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 CRYM-AS1A6NIL9 109 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 CDC14BO60729 498 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 CHRM2P08172 466 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 CXCL1P09341 107 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 CD38P28907 300 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 ACY1Q03154 408 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 FMODQ06828 376 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 C17orf67Q0P5P2 114 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 PLPPR5Q32ZL2 321 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 CDNFQ49AH0 187 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 MRPL14Q6P1L8 145 aaKnown RBP4.76□□□□□ -1.65
VPS50-202ENST00000305866 DNM1P34Q6PK57 102 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 H1FNTQ75WM6 255 aaPredicted RBP4.76□□□□□ -1.65
VPS50-202ENST00000305866 ANKRD37Q7Z713 158 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 ZNF100Q8IYN0 542 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 LRRC18Q8N456 261 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 TMEM234Q8WY98 164 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 GTF3AQ92664 365 aaKnown RBP4.76□□□□□ -1.65
VPS50-202ENST00000305866 MSI2Q96DH6 328 aaKnown RBP4.76□□□□□ -1.65
VPS50-202ENST00000305866 CNTNAP3BQ96NU0 1288 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 PRRT1Q99946 306 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 CRB3Q9BUF7 120 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 GGACTQ9BVM4 153 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 CNTNAP3Q9BZ76 1288 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 DMRT1Q9Y5R6 373 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 RP1P56715 2156 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 ALPK2Q86TB3 2170 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 UBE2QL1A1L167 161 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 CLEC18AA5D8T8 446 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 TMEM150CB9EJG8 249 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 DISC1C4P0D8 188 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 GATCO43716 136 aaKnown RBP4.76□□□□□ -1.65
VPS50-202ENST00000305866 KLK3P07288 261 aaPredicted RBP4.76□□□□□ -1.65
VPS50-202ENST00000305866 RNF4P78317 190 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 CCL20P78556 96 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 GLO1Q04760 184 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 ZP2Q05996 745 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 MFAP5Q13361 173 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 FAM189A2Q15884 450 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 CDCP2Q5VXM1 449 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 CD163Q86VB7 1156 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 CLEC18CQ8NCF0 446 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 OR14K1Q8NGZ2 314 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 SECTM1Q8WVN6 248 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 NABP1Q96AH0 204 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 GALNT14Q96FL9 552 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 FOXN4Q96NZ1 517 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 HHLA2Q9UM44 414 aa4.76□□□□□ -1.65
VPS50-202ENST00000305866 GTF2A1LQ9UNN4 478 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms