RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 F6UZH7 168 aa15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 SLC17A2O00624 439 aa15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 FCGR2CP31995 323 aa15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 SRP14P37108 136 aaKnown RBP15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 SSX9Q7RTT3 188 aa15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 CXorf67Q86X51 503 aaPredicted RBP15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 PELI1Q96FA3 418 aa15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 ANGPTL7O43827 346 aa15.78■□□□□ 0.12
CDC42EP3-201ENST00000295324 HOXD4P09016 255 aaPredicted RBP15.78■□□□□ 0.12
CDC42EP3-201ENST00000295324 TMEM217Q8N7C4 229 aa15.78■□□□□ 0.12
CDC42EP3-201ENST00000295324 RGPD3A6NKT7 1758 aaPredicted RBP15.78■□□□□ 0.12
CDC42EP3-201ENST00000295324 HRKO00198 91 aa15.78■□□□□ 0.12
CDC42EP3-201ENST00000295324 LTBRP36941 435 aa15.78■□□□□ 0.12
CDC42EP3-201ENST00000295324 CLINT1Q14677 625 aa15.78■□□□□ 0.12
CDC42EP3-201ENST00000295324 SSX8Q7RTT4 187 aa15.78■□□□□ 0.12
CDC42EP3-201ENST00000295324 C9orf40Q8IXQ3 194 aa15.78■□□□□ 0.12
CDC42EP3-201ENST00000295324 LSMEM1Q8N8F7 131 aa15.78■□□□□ 0.12
CDC42EP3-201ENST00000295324 TDRD15B5MCY1 1934 aaKnown RBP15.78■□□□□ 0.12
CDC42EP3-201ENST00000295324 ST8SIA5O15466 376 aa15.78■□□□□ 0.12
CDC42EP3-201ENST00000295324 DUSP1P28562 367 aa15.78■□□□□ 0.12
CDC42EP3-201ENST00000295324 PRICKLE3O43900 615 aaPredicted RBP15.78■□□□□ 0.12
CDC42EP3-201ENST00000295324 ERHP84090 104 aaKnown RBP15.78■□□□□ 0.12
CDC42EP3-201ENST00000295324 C3AR1Q16581 482 aa15.78■□□□□ 0.12
CDC42EP3-201ENST00000295324 PNLIPRP3Q17RR3 467 aa15.78■□□□□ 0.12
CDC42EP3-201ENST00000295324 OR2M3Q8NG83 312 aa15.78■□□□□ 0.12
CDC42EP3-201ENST00000295324 ONECUT1Q9UBC0 465 aa15.78■□□□□ 0.12
CDC42EP3-201ENST00000295324 FZR1Q9UM11 496 aa15.78■□□□□ 0.12
CDC42EP3-201ENST00000295324 MN1Q10571 1320 aaPredicted RBP15.77■□□□□ 0.12
CDC42EP3-201ENST00000295324 TUBAL3A6NHL2 446 aa15.77■□□□□ 0.12
CDC42EP3-201ENST00000295324 SDCBPO00560 298 aaPredicted RBP15.77■□□□□ 0.12
CDC42EP3-201ENST00000295324 SERPINF1P36955 418 aa15.77■□□□□ 0.12
CDC42EP3-201ENST00000295324 CDKN2AP42771 156 aaKnown RBP15.77■□□□□ 0.12
CDC42EP3-201ENST00000295324 MRPS34P82930 218 aaKnown RBP15.77■□□□□ 0.12
CDC42EP3-201ENST00000295324 Q6ZRG5 221 aa15.77■□□□□ 0.12
CDC42EP3-201ENST00000295324 CMTM2Q8TAZ6 248 aa15.77■□□□□ 0.12
CDC42EP3-201ENST00000295324 POFUT1Q9H488 388 aa15.77■□□□□ 0.12
CDC42EP3-201ENST00000295324 TAAR3PQ9P1P4 343 aa15.77■□□□□ 0.12
CDC42EP3-201ENST00000295324 A0A0B4J2A0 478 aa15.77■□□□□ 0.12
CDC42EP3-201ENST00000295324 KRTCAP3Q53RY4 240 aa15.77■□□□□ 0.12
CDC42EP3-201ENST00000295324 SMIM15Q7Z3B0 74 aa15.77■□□□□ 0.12
CDC42EP3-201ENST00000295324 SHPKQ9UHJ6 478 aa15.77■□□□□ 0.12
CDC42EP3-201ENST00000295324 A0A1B0GVG6 124 aa15.77■□□□□ 0.12
CDC42EP3-201ENST00000295324 CTLA4P16410 223 aa15.77■□□□□ 0.12
CDC42EP3-201ENST00000295324 ZNF17P17021 662 aa15.77■□□□□ 0.12
CDC42EP3-201ENST00000295324 PRDX4Q13162 271 aa15.77■□□□□ 0.12
CDC42EP3-201ENST00000295324 OR2B11Q5JQS5 317 aa15.77■□□□□ 0.12
CDC42EP3-201ENST00000295324 EXTL1Q92935 676 aa15.77■□□□□ 0.12
CDC42EP3-201ENST00000295324 CNTNAP3Q9BZ76 1288 aa15.77■□□□□ 0.12
CDC42EP3-201ENST00000295324 CYSLTR2Q9NS75 346 aa15.77■□□□□ 0.12
CDC42EP3-201ENST00000295324 FOCADQ5VW36 1801 aa15.77■□□□□ 0.11
CDC42EP3-201ENST00000295324 MPGP29372 298 aa15.77■□□□□ 0.11
CDC42EP3-201ENST00000295324 OR8G2PQ6IF36 304 aa15.77■□□□□ 0.11
CDC42EP3-201ENST00000295324 ARPC5LQ9BPX5 153 aa15.77■□□□□ 0.11
CDC42EP3-201ENST00000295324 NXPH3O95157 252 aa15.77■□□□□ 0.11
CDC42EP3-201ENST00000295324 SSTR2P30874 369 aa15.77■□□□□ 0.11
CDC42EP3-201ENST00000295324 ADPRHL1Q8NDY3 354 aa15.77■□□□□ 0.11
CDC42EP3-201ENST00000295324 ZNF721Q8TF20 911 aa15.77■□□□□ 0.11
CDC42EP3-201ENST00000295324 CMBLQ96DG6 245 aa15.77■□□□□ 0.11
CDC42EP3-201ENST00000295324 C4orf45Q96LM5 186 aa15.77■□□□□ 0.11
CDC42EP3-201ENST00000295324 ZNF251Q9BRH9 671 aa15.77■□□□□ 0.11
CDC42EP3-201ENST00000295324 RNF167Q9H6Y7 350 aa15.77■□□□□ 0.11
CDC42EP3-201ENST00000295324 ZNF354AO60765 605 aaPredicted RBP15.76■□□□□ 0.11
CDC42EP3-201ENST00000295324 WDR38Q5JTN6 314 aa15.76■□□□□ 0.11
CDC42EP3-201ENST00000295324 CD96P40200 585 aa15.76■□□□□ 0.11
CDC42EP3-201ENST00000295324 GABRA4P48169 554 aa15.76■□□□□ 0.11
CDC42EP3-201ENST00000295324 OR10A3P58181 314 aa15.76■□□□□ 0.11
CDC42EP3-201ENST00000295324 AARDQ4LEZ3 155 aa15.76■□□□□ 0.11
CDC42EP3-201ENST00000295324 C17orf78Q8N4C9 275 aa15.76■□□□□ 0.11
CDC42EP3-201ENST00000295324 HRH4Q9H3N8 390 aa15.76■□□□□ 0.11
CDC42EP3-201ENST00000295324 TMEFF2Q9UIK5 374 aaPredicted RBP15.76■□□□□ 0.11
CDC42EP3-201ENST00000295324 RPS10-NUDT3A0A1W2PQS6 291 aa15.76■□□□□ 0.11
CDC42EP3-201ENST00000295324 OR5B21A6NL26 309 aa15.76■□□□□ 0.11
CDC42EP3-201ENST00000295324 NKX2-8O15522 239 aa15.76■□□□□ 0.11
CDC42EP3-201ENST00000295324 PPP3CBP16298 524 aa15.76■□□□□ 0.11
CDC42EP3-201ENST00000295324 RPS10P46783 165 aaKnown RBP15.76■□□□□ 0.11
CDC42EP3-201ENST00000295324 FAM58AQ8N1B3 248 aa15.76■□□□□ 0.11
CDC42EP3-201ENST00000295324 A0A1W2PR77 199 aa15.76■□□□□ 0.11
CDC42EP3-201ENST00000295324 LSM6P62312 80 aaKnown RBP15.76■□□□□ 0.11
CDC42EP3-201ENST00000295324 KCNIP4Q6PIL6 250 aa15.76■□□□□ 0.11
CDC42EP3-201ENST00000295324 ZFP82Q8N141 532 aa15.76■□□□□ 0.11
CDC42EP3-201ENST00000295324 SVBPQ8N300 66 aa15.76■□□□□ 0.11
CDC42EP3-201ENST00000295324 ASB10Q8WXI3 467 aa15.76■□□□□ 0.11
CDC42EP3-201ENST00000295324 MPC1Q9Y5U8 109 aa15.76■□□□□ 0.11
CDC42EP3-201ENST00000295324 C16orf97H3BN30 126 aa15.75■□□□□ 0.11
CDC42EP3-201ENST00000295324 M0QZ24 198 aa15.75■□□□□ 0.11
CDC42EP3-201ENST00000295324 CLN5O75503 358 aa15.75■□□□□ 0.11
CDC42EP3-201ENST00000295324 MOB1BQ7L9L4 216 aa15.75■□□□□ 0.11
CDC42EP3-201ENST00000295324 ADGRG3Q86Y34 549 aa15.75■□□□□ 0.11
CDC42EP3-201ENST00000295324 GMPPAQ96IJ6 420 aaPredicted RBP15.75■□□□□ 0.11
CDC42EP3-201ENST00000295324 TAAR6Q96RI8 345 aa15.75■□□□□ 0.11
CDC42EP3-201ENST00000295324 TTTY12Q9BZ98 90 aa15.75■□□□□ 0.11
CDC42EP3-201ENST00000295324 TMEM74BQ9NUR3 256 aa15.75■□□□□ 0.11
CDC42EP3-201ENST00000295324 CCL27Q9Y4X3 112 aa15.75■□□□□ 0.11
CDC42EP3-201ENST00000295324 CRYM-AS1A6NIL9 109 aa15.75■□□□□ 0.11
CDC42EP3-201ENST00000295324 ADRA2CP18825 462 aa15.75■□□□□ 0.11
CDC42EP3-201ENST00000295324 DGCR2P98153 550 aa15.75■□□□□ 0.11
CDC42EP3-201ENST00000295324 SKP2Q13309 424 aa15.75■□□□□ 0.11
CDC42EP3-201ENST00000295324 DMRTC1Q5HYR2 192 aa15.75■□□□□ 0.11
CDC42EP3-201ENST00000295324 MOB3BQ86TA1 216 aa15.75■□□□□ 0.11
CDC42EP3-201ENST00000295324 EPXP11678 715 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms