RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 KIR2DS5Q14953 304 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 VN1R4Q7Z5H5 301 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 ARHGEF39Q8N4T4 335 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 ZNF611Q8N823 705 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 SLC39A7Q92504 469 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 ZNF764Q96H86 408 aaPredicted RBP13.49□□□□□ -0.25
CASC3-201ENST00000264645 GPR87Q9BY21 358 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 UCK1Q9HA47 277 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 KLK13Q9UKR3 277 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 STRCP1A6NGW2 1772 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 TCRBV21S2A2A0A5A6 115 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 ARGFXA6NJG6 315 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 CTSVO60911 334 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 CD200P41217 278 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 MRGPREQ86SM8 312 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 MRPL43Q8N983 215 aaKnown RBP13.49□□□□□ -0.25
CASC3-201ENST00000264645 C19orf47Q8N9M1 422 aaKnown RBP13.49□□□□□ -0.25
CASC3-201ENST00000264645 CCNL2Q96S94 520 aaPredicted RBP13.49□□□□□ -0.25
CASC3-201ENST00000264645 ARV1Q9H2C2 271 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 ENY2Q9NPA8 101 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 TREM2Q9NZC2 230 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 KCNK7Q9Y2U2 307 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 TMEM184BQ9Y519 407 aaPredicted RBP13.49□□□□□ -0.25
CASC3-201ENST00000264645 ZNF638Q14966 1978 aaKnown RBP13.49□□□□□ -0.25
CASC3-201ENST00000264645 ZNF320A2RRD8 509 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 CLN5O75503 358 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 CST2P09228 141 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 HLA-DRB3P79483 266 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 BAXQ07812 192 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 ETFRF1Q6IPR1 90 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 SLC36A1Q7Z2H8 476 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 ZNF439Q8NDP4 499 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 ZNF845Q96IR2 970 aaPredicted RBP13.49□□□□□ -0.25
CASC3-201ENST00000264645 ZNF816-ZNF321PA0A0X1KG74 233 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 FTCDNL1E5RQL4 147 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 ANGPTL7O43827 346 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 HOXB1P14653 301 aaPredicted RBP13.49□□□□□ -0.25
CASC3-201ENST00000264645 ST6GAL1P15907 406 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 PLP2Q04941 152 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 SURF2Q15527 256 aaPredicted RBP13.49□□□□□ -0.25
CASC3-201ENST00000264645 ZNF385CQ66K41 422 aaPredicted RBP13.49□□□□□ -0.25
CASC3-201ENST00000264645 ZNF321PQ8N8H1 164 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 OR5L2Q8NGL0 311 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 OR5C1Q8NGR4 320 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 ASB5Q8WWX0 329 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 MRPS2Q9Y399 296 aaKnown RBP13.49□□□□□ -0.25
CASC3-201ENST00000264645 V9GYS6 101 aa13.49□□□□□ -0.25
CASC3-201ENST00000264645 ELOA3CA0A087WX78 387 aaPredicted RBP13.48□□□□□ -0.25
CASC3-201ENST00000264645 SOCS1O15524 211 aa13.48□□□□□ -0.25
CASC3-201ENST00000264645 ZNF205O95201 554 aa13.48□□□□□ -0.25
CASC3-201ENST00000264645 TRGC2P03986 189 aa13.48□□□□□ -0.25
CASC3-201ENST00000264645 GUSBP08236 651 aa13.48□□□□□ -0.25
CASC3-201ENST00000264645 ZBTB25P24278 435 aa13.48□□□□□ -0.25
CASC3-201ENST00000264645 PPICP45877 212 aa13.48□□□□□ -0.25
CASC3-201ENST00000264645 DCAF7P61962 342 aa13.48□□□□□ -0.25
CASC3-201ENST00000264645 COL19A1Q14993 1142 aa13.48□□□□□ -0.25
CASC3-201ENST00000264645 MLF2Q15773 248 aaPredicted RBP13.48□□□□□ -0.25
CASC3-201ENST00000264645 MICBQ29980 383 aa13.48□□□□□ -0.25
CASC3-201ENST00000264645 SSX7Q7RTT5 188 aa13.48□□□□□ -0.25
CASC3-201ENST00000264645 MKXQ8IYA7 352 aa13.48□□□□□ -0.25
CASC3-201ENST00000264645 ANKRD9Q96BM1 317 aaPredicted RBP13.48□□□□□ -0.25
CASC3-201ENST00000264645 VN1R1Q9GZP7 353 aa13.48□□□□□ -0.25
CASC3-201ENST00000264645 ESRP2Q9H6T0 727 aaKnown RBP13.48□□□□□ -0.25
CASC3-201ENST00000264645 SPANXN5Q5MJ07 72 aa13.48□□□□□ -0.25
CASC3-201ENST00000264645 TSPO2Q5TGU0 170 aa13.48□□□□□ -0.25
CASC3-201ENST00000264645 APOBEC4Q8WW27 367 aaKnown RBP13.48□□□□□ -0.25
CASC3-201ENST00000264645 FAM103A1Q9BTL3 118 aaKnown RBP13.48□□□□□ -0.25
CASC3-201ENST00000264645 METTL1Q9UBP6 276 aaKnown RBP13.48□□□□□ -0.25
CASC3-201ENST00000264645 SBF2Q86WG5 1849 aa13.48□□□□□ -0.25
CASC3-201ENST00000264645 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.48□□□□□ -0.25
CASC3-201ENST00000264645 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.48□□□□□ -0.25
CASC3-201ENST00000264645 PTBP3O95758 552 aaKnown RBP13.48□□□□□ -0.25
CASC3-201ENST00000264645 CEACAM5P06731 702 aa13.48□□□□□ -0.25
CASC3-201ENST00000264645 ENDOGQ14249 297 aaKnown RBP13.48□□□□□ -0.25
CASC3-201ENST00000264645 IL22RA1Q8N6P7 574 aa13.48□□□□□ -0.25
CASC3-201ENST00000264645 MRPS18BQ9Y676 258 aaKnown RBP13.48□□□□□ -0.25
CASC3-201ENST00000264645 UNC13CQ8NB66 2214 aa13.48□□□□□ -0.25
CASC3-201ENST00000264645 ARID2Q68CP9 1835 aa13.47□□□□□ -0.25
CASC3-201ENST00000264645 SVILO95425 2214 aa13.47□□□□□ -0.25
CASC3-201ENST00000264645 HMGB3O15347 200 aaKnown RBP13.47□□□□□ -0.25
CASC3-201ENST00000264645 SEMA4FO95754 770 aa13.47□□□□□ -0.25
CASC3-201ENST00000264645 SULT1A2P50226 295 aa13.47□□□□□ -0.25
CASC3-201ENST00000264645 ZNF77Q15935 545 aa13.47□□□□□ -0.25
CASC3-201ENST00000264645 PDLIM3Q53GG5 364 aaPredicted RBP13.47□□□□□ -0.25
CASC3-201ENST00000264645 FAM78AQ5JUQ0 283 aa13.47□□□□□ -0.25
CASC3-201ENST00000264645 C1QL3Q5VWW1 255 aa13.47□□□□□ -0.25
CASC3-201ENST00000264645 ZSCAN4Q8NAM6 433 aaPredicted RBP13.47□□□□□ -0.25
CASC3-201ENST00000264645 SLC37A2Q8TED4 501 aa13.47□□□□□ -0.25
CASC3-201ENST00000264645 KISS1RQ969F8 398 aaPredicted RBP13.47□□□□□ -0.25
CASC3-201ENST00000264645 CAPNS2Q96L46 248 aa13.47□□□□□ -0.25
CASC3-201ENST00000264645 PARD6AQ9NPB6 346 aa13.47□□□□□ -0.25
CASC3-201ENST00000264645 HSF4Q9ULV5 492 aa13.47□□□□□ -0.25
CASC3-201ENST00000264645 CDC20BQ86Y33 519 aa13.47□□□□□ -0.25
CASC3-201ENST00000264645 LHX9Q9NQ69 397 aa13.47□□□□□ -0.25
CASC3-201ENST00000264645 OR14J1Q9UGF5 321 aa13.47□□□□□ -0.25
CASC3-201ENST00000264645 EFSO43281 561 aa13.47□□□□□ -0.25
CASC3-201ENST00000264645 NDUFS6O75380 124 aaKnown RBP13.47□□□□□ -0.25
CASC3-201ENST00000264645 METTL15P1P0C7V9 234 aa13.47□□□□□ -0.25
CASC3-201ENST00000264645 ACKR3P25106 362 aa13.47□□□□□ -0.25
CASC3-201ENST00000264645 ZNF121P58317 390 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms