RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 MMABQ96EY8 250 aaPredicted RBP10.96□□□□□ -0.66
CHMP2B-201ENST00000263780 ARHGAP5-AS1Q96IT6 56 aa10.96□□□□□ -0.66
CHMP2B-201ENST00000263780 BMFQ96LC9 184 aa10.96□□□□□ -0.66
CHMP2B-201ENST00000263780 C5orf34Q96MH7 638 aa10.96□□□□□ -0.66
CHMP2B-201ENST00000263780 KCNIP3Q9Y2W7 256 aa10.96□□□□□ -0.66
CHMP2B-201ENST00000263780 LOC101059948A0A1B0GTJ6 334 aa10.95□□□□□ -0.66
CHMP2B-201ENST00000263780 SERPINE3A8MV23 424 aa10.95□□□□□ -0.66
CHMP2B-201ENST00000263780 RAD51DO75771 328 aa10.95□□□□□ -0.66
CHMP2B-201ENST00000263780 HNRNPA2B1P22626 353 aaKnown RBP10.95□□□□□ -0.66
CHMP2B-201ENST00000263780 AFF3P51826 1226 aaKnown RBP10.95□□□□□ -0.66
CHMP2B-201ENST00000263780 RPS23P62266 143 aaKnown RBP10.95□□□□□ -0.66
CHMP2B-201ENST00000263780 HSD11B2P80365 405 aa10.95□□□□□ -0.66
CHMP2B-201ENST00000263780 HLA-DQA1Q5Y7H0 255 aa10.95□□□□□ -0.66
CHMP2B-201ENST00000263780 FAM89BQ8N5H3 189 aa10.95□□□□□ -0.66
CHMP2B-201ENST00000263780 TMEM104Q8NE00 496 aa10.95□□□□□ -0.66
CHMP2B-201ENST00000263780 YPEL4Q96NS1 127 aa10.95□□□□□ -0.66
CHMP2B-201ENST00000263780 GNRHR2Q96P88 292 aa10.95□□□□□ -0.66
CHMP2B-201ENST00000263780 GPER1Q99527 375 aa10.95□□□□□ -0.66
CHMP2B-201ENST00000263780 NRSN2Q9GZP1 204 aa10.95□□□□□ -0.66
CHMP2B-201ENST00000263780 PNO1Q9NRX1 252 aaKnown RBP10.95□□□□□ -0.66
CHMP2B-201ENST00000263780 HTTP42858 3142 aa10.95□□□□□ -0.66
CHMP2B-201ENST00000263780 A0A087WWC5 75 aa10.95□□□□□ -0.66
CHMP2B-201ENST00000263780 ELOA3CA0A087WX78 387 aaPredicted RBP10.95□□□□□ -0.66
CHMP2B-201ENST00000263780 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.95□□□□□ -0.66
CHMP2B-201ENST00000263780 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.95□□□□□ -0.66
CHMP2B-201ENST00000263780 H0Y8X5 98 aa10.95□□□□□ -0.66
CHMP2B-201ENST00000263780 PRKNO60260 465 aaPredicted RBP10.95□□□□□ -0.66
CHMP2B-201ENST00000263780 IFNA10P01566 189 aa10.95□□□□□ -0.66
CHMP2B-201ENST00000263780 HCKP08631 526 aa10.95□□□□□ -0.66
CHMP2B-201ENST00000263780 PYY3Q5JQD4 70 aa10.95□□□□□ -0.66
CHMP2B-201ENST00000263780 GGNBP1Q5YKI7 109 aa10.95□□□□□ -0.66
CHMP2B-201ENST00000263780 TANGO2Q6ICL3 276 aa10.95□□□□□ -0.66
CHMP2B-201ENST00000263780 TMEM151BQ8IW70 566 aa10.95□□□□□ -0.66
CHMP2B-201ENST00000263780 ZNF610Q8N9Z0 462 aa10.95□□□□□ -0.66
CHMP2B-201ENST00000263780 ZNF383Q8NA42 475 aa10.95□□□□□ -0.66
CHMP2B-201ENST00000263780 OR51T1Q8NGJ9 327 aa10.95□□□□□ -0.66
CHMP2B-201ENST00000263780 PTPMT1Q8WUK0 201 aaPredicted RBP10.95□□□□□ -0.66
CHMP2B-201ENST00000263780 KLHDC3Q9BQ90 382 aa10.95□□□□□ -0.66
CHMP2B-201ENST00000263780 BANF2Q9H503 90 aa10.95□□□□□ -0.66
CHMP2B-201ENST00000263780 BTBD17A6NE02 478 aa10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 CXorf65A6NEN9 183 aa10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 SDCBPO00560 298 aaPredicted RBP10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 RRP8O43159 456 aaKnown RBP10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 YIF1AO95070 293 aa10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 CTSBP07858 339 aa10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 BCKDHBP21953 392 aa10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 NTSR1P30989 418 aa10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 PTGER4P35408 488 aa10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 DHPSP49366 369 aaPredicted RBP10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 RBP2P50120 134 aa10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 NDUFA6P56556 154 aa10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 MFSD8Q8NHS3 518 aa10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 RNASE11Q8TAA1 199 aaKnown RBP10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 GPBAR1Q8TDU6 330 aa10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 PATE1Q8WXA2 126 aa10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 CPNE4Q96A23 557 aaPredicted RBP10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 SLAMF9Q96A28 289 aa10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 C1orf147Q96MC9 270 aaPredicted RBP10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 KCNK17Q96T54 332 aa10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 PARP12Q9H0J9 701 aaKnown RBP10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 PISDQ9UG56 409 aa10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 FBXO7Q9Y3I1 522 aa10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 MMACHCQ9Y4U1 282 aa10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 OR13C7P0DN81 318 aa10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 HIST1H1BP16401 226 aaKnown RBP10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 LMO1P25800 156 aa10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 SSX9Q7RTT3 188 aa10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 GALNTL5Q7Z4T8 443 aa10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 COMMD2Q86X83 199 aa10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 OR5AS1Q8N127 324 aa10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 C12orf76Q8N812 135 aaPredicted RBP10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 OR8G5Q8NG78 346 aa10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 OR13D1Q8NGV5 346 aa10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 OR51E1Q8TCB6 317 aa10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 SLC37A2Q8TED4 501 aa10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 TMEM234Q8WY98 164 aa10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 GTF3AQ92664 365 aaKnown RBP10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 MR1Q95460 341 aa10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 ADIPOR1Q96A54 375 aa10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 TCTN2Q96GX1 697 aa10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 OR8D2Q9GZM6 311 aa10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 SIRT7Q9NRC8 400 aa10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 PUS1Q9Y606 427 aaKnown RBP eCLIP10.94□□□□□ -0.66
CHMP2B-201ENST00000263780 LINC01553A4QN01 128 aa10.93□□□□□ -0.66
CHMP2B-201ENST00000263780 CRYM-AS1A6NIL9 109 aa10.93□□□□□ -0.66
CHMP2B-201ENST00000263780 TMEM150CB9EJG8 249 aa10.93□□□□□ -0.66
CHMP2B-201ENST00000263780 ZNF878C9JN71 531 aa10.93□□□□□ -0.66
CHMP2B-201ENST00000263780 H0YIG0 161 aa10.93□□□□□ -0.66
CHMP2B-201ENST00000263780 ST8SIA5O15466 376 aa10.93□□□□□ -0.66
CHMP2B-201ENST00000263780 SCGB1D2O95969 90 aa10.93□□□□□ -0.66
CHMP2B-201ENST00000263780 AKT2P31751 481 aa10.93□□□□□ -0.66
CHMP2B-201ENST00000263780 OR3A4PP47883 348 aa10.93□□□□□ -0.66
CHMP2B-201ENST00000263780 PPP1CAP62136 330 aa10.93□□□□□ -0.66
CHMP2B-201ENST00000263780 IL13RA2Q14627 380 aa10.93□□□□□ -0.66
CHMP2B-201ENST00000263780 H1FNTQ75WM6 255 aaPredicted RBP10.93□□□□□ -0.66
CHMP2B-201ENST00000263780 RTN4RL2Q86UN3 420 aa10.93□□□□□ -0.66
CHMP2B-201ENST00000263780 PRR22Q8IZ63 422 aa10.93□□□□□ -0.66
CHMP2B-201ENST00000263780 AVL9Q8NBF6 648 aa10.93□□□□□ -0.66
CHMP2B-201ENST00000263780 AKR7LQ8NHP1 331 aa10.93□□□□□ -0.66
CHMP2B-201ENST00000263780 C11orf40Q8WZ69 217 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms