RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 NPRL2Q8WTW4 380 aa12.62□□□□□ -0.39
SHPK-201ENST00000225519 RSC1A1Q92681 617 aa12.62□□□□□ -0.39
SHPK-201ENST00000225519 ZNF524Q96C55 264 aa12.62□□□□□ -0.39
SHPK-201ENST00000225519 LURAP1Q96LR2 239 aa12.62□□□□□ -0.39
SHPK-201ENST00000225519 ZNF587BE7ETH6 402 aa12.62□□□□□ -0.39
SHPK-201ENST00000225519 BCKDHBP21953 392 aa12.62□□□□□ -0.39
SHPK-201ENST00000225519 SLC6A8P48029 635 aa12.62□□□□□ -0.39
SHPK-201ENST00000225519 TAS2R46P59540 309 aa12.62□□□□□ -0.39
SHPK-201ENST00000225519 ABHD12BQ7Z5M8 362 aaPredicted RBP12.62□□□□□ -0.39
SHPK-201ENST00000225519 FAM60AQ9NP50 221 aa12.62□□□□□ -0.39
SHPK-201ENST00000225519 SLC2A4RGQ9NR83 387 aa12.62□□□□□ -0.39
SHPK-201ENST00000225519 NUP210LQ5VU65 1888 aa12.61□□□□□ -0.39
SHPK-201ENST00000225519 APODP05090 189 aa12.61□□□□□ -0.39
SHPK-201ENST00000225519 ZNF117Q03924 483 aa12.61□□□□□ -0.39
SHPK-201ENST00000225519 GAB4Q2WGN9 574 aa12.61□□□□□ -0.39
SHPK-201ENST00000225519 C1orf140Q5VVS0 124 aa12.61□□□□□ -0.39
SHPK-201ENST00000225519 NUP54Q7Z3B4 507 aa12.61□□□□□ -0.39
SHPK-201ENST00000225519 AVL9Q8NBF6 648 aa12.61□□□□□ -0.39
SHPK-201ENST00000225519 TOMM40LQ969M1 308 aa12.61□□□□□ -0.39
SHPK-201ENST00000225519 RHBDD3Q9Y3P4 386 aa12.61□□□□□ -0.39
SHPK-201ENST00000225519 EP300Q09472 2414 aaPredicted RBP12.61□□□□□ -0.39
SHPK-201ENST00000225519 RANBP2P49792 3224 aaKnown RBP12.61□□□□□ -0.39
SHPK-201ENST00000225519 A0A087X0M5 115 aa12.61□□□□□ -0.39
SHPK-201ENST00000225519 A0A1B0GX30 115 aa12.61□□□□□ -0.39
SHPK-201ENST00000225519 GUSBP08236 651 aa12.61□□□□□ -0.39
SHPK-201ENST00000225519 GLI4P10075 376 aa12.61□□□□□ -0.39
SHPK-201ENST00000225519 PGCP20142 388 aa12.61□□□□□ -0.39
SHPK-201ENST00000225519 OR3A4PP47883 348 aa12.61□□□□□ -0.39
SHPK-201ENST00000225519 PLAC9Q5JTB6 97 aa12.61□□□□□ -0.39
SHPK-201ENST00000225519 MALSU1Q96EH3 234 aa12.61□□□□□ -0.39
SHPK-201ENST00000225519 C14orf144Q96I85 54 aa12.61□□□□□ -0.39
SHPK-201ENST00000225519 IER2Q9BTL4 223 aa12.61□□□□□ -0.39
SHPK-201ENST00000225519 GPR61Q9BZJ8 451 aa12.61□□□□□ -0.39
SHPK-201ENST00000225519 CHST5Q9GZS9 411 aa12.61□□□□□ -0.39
SHPK-201ENST00000225519 PBOV1Q9GZY1 135 aa12.61□□□□□ -0.39
SHPK-201ENST00000225519 PLEKHA2Q9HB19 425 aa12.61□□□□□ -0.39
SHPK-201ENST00000225519 TMED7-TICAM2A0A0A6YYA0 188 aa12.61□□□□□ -0.39
SHPK-201ENST00000225519 PRR19A6NJB7 356 aa12.61□□□□□ -0.39
SHPK-201ENST00000225519 A8MVM7 634 aa12.61□□□□□ -0.39
SHPK-201ENST00000225519 F10P00742 488 aa12.61□□□□□ -0.39
SHPK-201ENST00000225519 HNRNPA1P09651 372 aaKnown RBP eCLIP12.61□□□□□ -0.39
SHPK-201ENST00000225519 GJA4P35212 333 aa12.61□□□□□ -0.39
SHPK-201ENST00000225519 GAMTQ14353 236 aa12.61□□□□□ -0.39
SHPK-201ENST00000225519 AKR1C8PQ5T2L2 129 aa12.61□□□□□ -0.39
SHPK-201ENST00000225519 GGNBP1Q5YKI7 109 aa12.61□□□□□ -0.39
SHPK-201ENST00000225519 PLXDC2Q6UX71 529 aa12.61□□□□□ -0.39
SHPK-201ENST00000225519 KDF1Q8NAX2 398 aaPredicted RBP12.61□□□□□ -0.39
SHPK-201ENST00000225519 MRPL24Q96A35 216 aaKnown RBP12.61□□□□□ -0.39
SHPK-201ENST00000225519 BTBD17A6NE02 478 aa12.6□□□□□ -0.39
SHPK-201ENST00000225519 ZNF726A6NNF4 738 aa12.6□□□□□ -0.39
SHPK-201ENST00000225519 ZNF217O75362 1048 aa12.6□□□□□ -0.39
SHPK-201ENST00000225519 ISG15P05161 165 aa12.6□□□□□ -0.39
SHPK-201ENST00000225519 IFI6P09912 130 aa12.6□□□□□ -0.39
SHPK-201ENST00000225519 FABP4P15090 132 aa12.6□□□□□ -0.39
SHPK-201ENST00000225519 SURF2Q15527 256 aaPredicted RBP12.6□□□□□ -0.39
SHPK-201ENST00000225519 ZNF124Q15973 351 aa12.6□□□□□ -0.39
SHPK-201ENST00000225519 SFTPA2Q8IWL1 248 aa12.6□□□□□ -0.39
SHPK-201ENST00000225519 GTF3AQ92664 365 aaKnown RBP12.6□□□□□ -0.39
SHPK-201ENST00000225519 SEC14L6B5MCN3 397 aa12.6□□□□□ -0.39
SHPK-201ENST00000225519 CYB5BO43169 146 aa12.6□□□□□ -0.39
SHPK-201ENST00000225519 FOXS1O43638 330 aa12.6□□□□□ -0.39
SHPK-201ENST00000225519 DANCRP0C864 163 aa12.6□□□□□ -0.39
SHPK-201ENST00000225519 BLVRBP30043 206 aaPredicted RBP12.6□□□□□ -0.39
SHPK-201ENST00000225519 PPP1CCP36873 323 aaKnown RBP12.6□□□□□ -0.39
SHPK-201ENST00000225519 ZNF343Q6P1L6 599 aa12.6□□□□□ -0.39
SHPK-201ENST00000225519 HEPN1Q6WQI6 88 aa12.6□□□□□ -0.39
SHPK-201ENST00000225519 MARS2Q96GW9 593 aaKnown RBP12.6□□□□□ -0.39
SHPK-201ENST00000225519 SUCNR1Q9BXA5 334 aa12.6□□□□□ -0.39
SHPK-201ENST00000225519 ASCC3Q8N3C0 2202 aaKnown RBP12.6□□□□□ -0.39
SHPK-201ENST00000225519 LINC01553A4QN01 128 aa12.6□□□□□ -0.39
SHPK-201ENST00000225519 CDC14BO60729 498 aa12.6□□□□□ -0.39
SHPK-201ENST00000225519 DEDDO75618 318 aa12.6□□□□□ -0.39
SHPK-201ENST00000225519 RAD51DO75771 328 aa12.6□□□□□ -0.39
SHPK-201ENST00000225519 MT-ATP6P00846 226 aa12.6□□□□□ -0.39
SHPK-201ENST00000225519 HLA-DOBP13765 273 aa12.6□□□□□ -0.39
SHPK-201ENST00000225519 SELLP14151 372 aa12.6□□□□□ -0.39
SHPK-201ENST00000225519 PTGER4P35408 488 aa12.6□□□□□ -0.39
SHPK-201ENST00000225519 ASCL1P50553 236 aa12.6□□□□□ -0.39
SHPK-201ENST00000225519 ZNF239Q16600 458 aaKnown RBP12.6□□□□□ -0.39
SHPK-201ENST00000225519 ABCA11PQ4W5N1 156 aa12.6□□□□□ -0.39
SHPK-201ENST00000225519 RNF144BQ7Z419 303 aa12.6□□□□□ -0.39
SHPK-201ENST00000225519 ZNF519Q8TB69 540 aa12.6□□□□□ -0.39
SHPK-201ENST00000225519 SLAMF6Q96DU3 332 aa12.6□□□□□ -0.39
SHPK-201ENST00000225519 CYYR1Q96J86 154 aa12.6□□□□□ -0.39
SHPK-201ENST00000225519 ADAM19Q9H013 955 aa12.6□□□□□ -0.39
SHPK-201ENST00000225519 OR10A2Q9H208 303 aa12.6□□□□□ -0.39
SHPK-201ENST00000225519 UNKLQ9H9P5 680 aaKnown RBP12.6□□□□□ -0.39
SHPK-201ENST00000225519 KCNIP3Q9Y2W7 256 aa12.6□□□□□ -0.39
SHPK-201ENST00000225519 TMEM14DPA8MWL7 114 aa12.59□□□□□ -0.39
SHPK-201ENST00000225519 TTRP02766 147 aa12.59□□□□□ -0.39
SHPK-201ENST00000225519 HEXBP07686 556 aa12.59□□□□□ -0.39
SHPK-201ENST00000225519 SEC11BP0C7V7 166 aa12.59□□□□□ -0.39
SHPK-201ENST00000225519 ACY1Q03154 408 aa12.59□□□□□ -0.39
SHPK-201ENST00000225519 NFATC4Q14934 902 aa12.59□□□□□ -0.39
SHPK-201ENST00000225519 HAGHQ16775 308 aa12.59□□□□□ -0.39
SHPK-201ENST00000225519 ZNF542PQ5EBM4 170 aa12.59□□□□□ -0.39
SHPK-201ENST00000225519 FIP1L1Q6UN15 594 aaKnown RBP12.59□□□□□ -0.39
SHPK-201ENST00000225519 ZNF321PQ8N8H1 164 aa12.59□□□□□ -0.39
SHPK-201ENST00000225519 BSCL2Q96G97 398 aaPredicted RBP12.59□□□□□ -0.39
SHPK-201ENST00000225519 RARRES2Q99969 163 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms