RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 SIGLEC12Q96PQ1 595 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 CHST6Q9GZX3 395 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 RGCCQ9H4X1 137 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 GPR35Q9HC97 309 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 MCTS1Q9ULC4 181 aaKnown RBP7.23□□□□□ -1.25
VAMP3-201ENST00000054666 KCNK7Q9Y2U2 307 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 KLF13Q9Y2Y9 288 aaPredicted RBP7.23□□□□□ -1.25
VAMP3-201ENST00000054666 MAB21L2Q9Y586 359 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 GPR179Q6PRD1 2367 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 FXYD6-FXYD2A0A087WZ82 144 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 A0A1W2PP11 408 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 FAM166BA8MTA8 275 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 ERVH48-1M5A8F1 160 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 MFNGO00587 321 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 TERTO14746 1132 aaKnown RBP7.23□□□□□ -1.25
VAMP3-201ENST00000054666 SIX6O95475 246 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 PRKACBP22694 351 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 NFYAP23511 347 aaPredicted RBP7.23□□□□□ -1.25
VAMP3-201ENST00000054666 RFC3P40938 356 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 H2BFSP57053 126 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 TAS2R31P59538 309 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 RAB14P61106 215 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 SRYQ05066 204 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 UBE2V2Q15819 145 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 LINC00696Q6ZRV3 163 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 RNF144BQ7Z419 303 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 GALNTL5Q7Z4T8 443 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 OR2AE1Q8NHA4 323 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 AKR7LQ8NHP1 331 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 ADAMTS17Q8TE56 1095 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 ARHGAP5-AS1Q96IT6 56 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 PDCD10Q9BUL8 212 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 TTTY12Q9BZ98 90 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 PRRG4Q9BZD6 226 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 FXYD6Q9H0Q3 95 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 IRF2BPLQ9H1B7 796 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 PARPBPQ9NWS1 579 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 ZNF224Q9NZL3 707 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 VSIG4Q9Y279 399 aa7.23□□□□□ -1.25
VAMP3-201ENST00000054666 NCOR1O75376 2440 aa7.22□□□□□ -1.25
VAMP3-201ENST00000054666 PLSCR5A0PG75 271 aa7.22□□□□□ -1.25
VAMP3-201ENST00000054666 OR14I1A6ND48 311 aa7.22□□□□□ -1.25
VAMP3-201ENST00000054666 OR6C65A6NJZ3 312 aa7.22□□□□□ -1.25
VAMP3-201ENST00000054666 HMSDA8MTL9 139 aa7.22□□□□□ -1.25
VAMP3-201ENST00000054666 SERPINE3A8MV23 424 aa7.22□□□□□ -1.25
VAMP3-201ENST00000054666 ARPC5O15511 151 aa7.22□□□□□ -1.25
VAMP3-201ENST00000054666 SSX5O60225 188 aa7.22□□□□□ -1.25
VAMP3-201ENST00000054666 RP2O75695 350 aa7.22□□□□□ -1.25
VAMP3-201ENST00000054666 PMP2P02689 132 aa7.22□□□□□ -1.25
VAMP3-201ENST00000054666 AMY2BP19961 511 aa7.22□□□□□ -1.25
VAMP3-201ENST00000054666 LHX2P50458 406 aa7.22□□□□□ -1.25
VAMP3-201ENST00000054666 MTCP1P56278 107 aa7.22□□□□□ -1.25
VAMP3-201ENST00000054666 TAS2R46P59540 309 aa7.22□□□□□ -1.25
VAMP3-201ENST00000054666 SEC61A1P61619 476 aaKnown RBP7.22□□□□□ -1.25
VAMP3-201ENST00000054666 FGL1Q08830 312 aa7.22□□□□□ -1.25
VAMP3-201ENST00000054666 OPCMLQ14982 345 aa7.22□□□□□ -1.25
VAMP3-201ENST00000054666 RSPO1Q2MKA7 263 aaPredicted RBP7.22□□□□□ -1.25
VAMP3-201ENST00000054666 NRN1LQ496H8 165 aa7.22□□□□□ -1.25
VAMP3-201ENST00000054666 PLAC9Q5JTB6 97 aa7.22□□□□□ -1.25
VAMP3-201ENST00000054666 FAHD2BQ6P2I3 314 aaPredicted RBP7.22□□□□□ -1.25
VAMP3-201ENST00000054666 C17orf107Q6ZR85 190 aa7.22□□□□□ -1.25
VAMP3-201ENST00000054666 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.22□□□□□ -1.25
VAMP3-201ENST00000054666 LYG2Q86SG7 212 aa7.22□□□□□ -1.25
VAMP3-201ENST00000054666 TMEM17Q86X19 198 aa7.22□□□□□ -1.25
VAMP3-201ENST00000054666 SULF2Q8IWU5 870 aa7.22□□□□□ -1.25
VAMP3-201ENST00000054666 ARRDC1Q8N5I2 433 aa7.22□□□□□ -1.25
VAMP3-201ENST00000054666 OR5H2Q8NGV7 314 aa7.22□□□□□ -1.25
VAMP3-201ENST00000054666 SGK3Q96BR1 496 aa7.22□□□□□ -1.25
VAMP3-201ENST00000054666 FAHD2AQ96GK7 314 aa7.22□□□□□ -1.25
VAMP3-201ENST00000054666 SCGB3A2Q96PL1 93 aa7.22□□□□□ -1.25
VAMP3-201ENST00000054666 PHB2Q99623 299 aa7.22□□□□□ -1.25
VAMP3-201ENST00000054666 HES7Q9BYE0 225 aa7.22□□□□□ -1.25
VAMP3-201ENST00000054666 OR2H1Q9GZK4 316 aa7.22□□□□□ -1.25
VAMP3-201ENST00000054666 HEXA-AS1Q9H8Q6 139 aa7.22□□□□□ -1.25
VAMP3-201ENST00000054666 GPR173Q9NS66 373 aa7.22□□□□□ -1.25
VAMP3-201ENST00000054666 ANAPC10Q9UM13 185 aa7.22□□□□□ -1.25
VAMP3-201ENST00000054666 IGKV3D-15A0A087WSY6 115 aa7.21□□□□□ -1.25
VAMP3-201ENST00000054666 ZNF587BE7ETH6 402 aa7.21□□□□□ -1.25
VAMP3-201ENST00000054666 XRCC2O43543 280 aa7.21□□□□□ -1.25
VAMP3-201ENST00000054666 CSTBP04080 98 aaKnown RBP7.21□□□□□ -1.25
VAMP3-201ENST00000054666 TMEM225BP0DP42 221 aa7.21□□□□□ -1.25
VAMP3-201ENST00000054666 LIPCP11150 499 aa7.21□□□□□ -1.25
VAMP3-201ENST00000054666 NAT2P11245 290 aa7.21□□□□□ -1.25
VAMP3-201ENST00000054666 VAMP1P23763 118 aa7.21□□□□□ -1.25
VAMP3-201ENST00000054666 BLVRBP30043 206 aaPredicted RBP7.21□□□□□ -1.25
VAMP3-201ENST00000054666 NTF4P34130 210 aa7.21□□□□□ -1.25
VAMP3-201ENST00000054666 MAGEA5P43359 124 aa7.21□□□□□ -1.25
VAMP3-201ENST00000054666 PSG4Q00888 419 aa7.21□□□□□ -1.25
VAMP3-201ENST00000054666 EXOSC2Q13868 293 aaKnown RBP7.21□□□□□ -1.25
VAMP3-201ENST00000054666 DMRTC1Q5HYR2 192 aa7.21□□□□□ -1.25
VAMP3-201ENST00000054666 VAX1Q5SQQ9 334 aa7.21□□□□□ -1.25
VAMP3-201ENST00000054666 DCAF12L2Q5VW00 463 aa7.21□□□□□ -1.25
VAMP3-201ENST00000054666 LHFPL2Q6ZUX7 228 aa7.21□□□□□ -1.25
VAMP3-201ENST00000054666 SLC25A42Q86VD7 318 aa7.21□□□□□ -1.25
VAMP3-201ENST00000054666 OR5M8Q8NGP6 311 aa7.21□□□□□ -1.25
VAMP3-201ENST00000054666 BORCS8Q96FH0 119 aa7.21□□□□□ -1.25
VAMP3-201ENST00000054666 CITED4Q96RK1 184 aa7.21□□□□□ -1.25
VAMP3-201ENST00000054666 TM2D1Q9BX74 207 aa7.21□□□□□ -1.25
VAMP3-201ENST00000054666 LINC00470Q9BZP3 86 aa7.21□□□□□ -1.25
VAMP3-201ENST00000054666 SLC6A15Q9H2J7 730 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms