RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Slc39a8Q91W10 462 aa14.08□□□□□ -0.16
Trim39-203ENSMUST00000113706 Itfg2Q91WI7 443 aa14.08□□□□□ -0.16
Trim39-203ENSMUST00000113706 Il24Q925S4 181 aa14.08□□□□□ -0.16
Trim39-203ENSMUST00000113706 PlpbpQ9Z2Y8 274 aa14.08□□□□□ -0.16
Trim39-203ENSMUST00000113706 Gm21936A0A1Y7VJE9 144 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Gm5788A0A1Y7VK80 144 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Tomm5B1AXP6 51 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 4933403O08RikF6UK53 379 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Gm3327F7C9A1 213 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Gm5039J3QNT6 144 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Olfr1425K7N659 312 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Hprt1P00493 218 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 SparcP07214 302 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Gm2016Q3TQZ4 144 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Gm8332Q3UTA4 144 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Zdhhc25Q810M4 279 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Gm5662Q8BX20 144 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Utp15Q8C7V3 528 aaKnown RBP14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Olfr1426Q8VG74 311 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Ripply3Q924S9 152 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Tmem42Q9CR22 157 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 D10Wsu102eQ9CX66 185 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Ppp1r35Q9D8C8 260 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Sec61a2Q9JLR1 476 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Pkd1l3Q2EG98 2201 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Olfr1097A2AVA9 315 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Pcdh17E9PXF0 1157 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Dbx2F8VQH7 377 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 PlatP11214 559 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Drd3P30728 446 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 PkibQ04758 92 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Fbxw16Q497Z0 464 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Bcap29Q61334 240 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 CstbQ62426 98 aaKnown RBP14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 BckdhbQ6P3A8 390 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Slc25a32Q8BMG8 316 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Tmem234Q8R1E7 140 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Vmn1r74Q8R290 304 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Olfr56Q8VGD6 315 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Mpc2Q9D023 127 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Gkn3Q9D0T7 191 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Cldnd2Q9D9H2 167 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Adh4Q9QYY9 377 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Mup3P04939 184 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Tpi1P17751 299 aaKnown RBP14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Tas2r123P59528 333 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Gm6899Q3USS0 134 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 RalyQ64012 312 aaKnown RBP14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Spem2Q8C5U4 503 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 4930503E14RikQ9D583 177 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Eif3kQ9DBZ5 218 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 Gm17087V9GXQ2 156 aa14.07□□□□□ -0.16
Trim39-203ENSMUST00000113706 4930563M21RikA0A1L1SUT5 578 aa14.06□□□□□ -0.16
Trim39-203ENSMUST00000113706 Gm43720E0CXM8 267 aa14.06□□□□□ -0.16
Trim39-203ENSMUST00000113706 Olfr152G3X9L8 316 aa14.06□□□□□ -0.16
Trim39-203ENSMUST00000113706 Vmn2r29L7N2D4 852 aa14.06□□□□□ -0.16
Trim39-203ENSMUST00000113706 Ccr2P51683 373 aa14.06□□□□□ -0.16
Trim39-203ENSMUST00000113706 Rac1P63001 192 aa14.06□□□□□ -0.16
Trim39-203ENSMUST00000113706 Tmem171Q4KL18 322 aa14.06□□□□□ -0.16
Trim39-203ENSMUST00000113706 Irgm1Q60766 409 aa14.06□□□□□ -0.16
Trim39-203ENSMUST00000113706 Adh7Q64437 374 aa14.06□□□□□ -0.16
Trim39-203ENSMUST00000113706 Olfr17Q7TRM9 315 aa14.06□□□□□ -0.16
Trim39-203ENSMUST00000113706 Olfr517Q7TRU4 314 aa14.06□□□□□ -0.16
Trim39-203ENSMUST00000113706 Fam98bQ80VD1 429 aaKnown RBP14.06□□□□□ -0.16
Trim39-203ENSMUST00000113706 Glb1lQ8VC60 646 aa14.06□□□□□ -0.16
Trim39-203ENSMUST00000113706 Znf385aQ8VD12 386 aaKnown RBP14.06□□□□□ -0.16
Trim39-203ENSMUST00000113706 Olfr1377Q8VGH1 307 aa14.06□□□□□ -0.16
Trim39-203ENSMUST00000113706 Nkiras2Q9CR56 191 aa14.06□□□□□ -0.16
Trim39-203ENSMUST00000113706 CymB7ZWD6 379 aa14.06□□□□□ -0.16
Trim39-203ENSMUST00000113706 Jmjd7P0C872 316 aa14.06□□□□□ -0.16
Trim39-203ENSMUST00000113706 Cd48P18181 240 aa14.06□□□□□ -0.16
Trim39-203ENSMUST00000113706 GrnP28798 589 aaKnown RBP14.06□□□□□ -0.16
Trim39-203ENSMUST00000113706 Upk2P38575 184 aa14.06□□□□□ -0.16
Trim39-203ENSMUST00000113706 Map2k6P70236 334 aaKnown RBP14.06□□□□□ -0.16
Trim39-203ENSMUST00000113706 Nos3P70313 1202 aa14.06□□□□□ -0.16
Trim39-203ENSMUST00000113706 Nrsn1P97799 196 aa14.06□□□□□ -0.16
Trim39-203ENSMUST00000113706 Pik3ip1Q7TMJ8 264 aa14.06□□□□□ -0.16
Trim39-203ENSMUST00000113706 Tas2r136Q7TQA8 305 aa14.06□□□□□ -0.16
Trim39-203ENSMUST00000113706 Tmprss7Q8BIK6 829 aa14.06□□□□□ -0.16
Trim39-203ENSMUST00000113706 Mfsd4b1Q8VCV9 425 aa14.06□□□□□ -0.16
Trim39-203ENSMUST00000113706 Rwdd2bQ99M03 290 aa14.06□□□□□ -0.16
Trim39-203ENSMUST00000113706 Gk2Q9WU65 554 aa14.06□□□□□ -0.16
Trim39-203ENSMUST00000113706 Spaca5A2AE20 160 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Ndufaf6A2AIL4 333 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Olfr420E9Q4G0 321 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Gstp3F6RWR5 210 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Mtnd4lP03903 98 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Fam219bQ14DQ1 197 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 ArsgQ3TYD4 525 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Svs6Q64356 99 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Gm13757Q7TR17 305 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Nob1Q8BW10 403 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Gucd1Q8BZI6 239 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Fbxo4Q8CHQ0 385 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Dnajc22Q8CHS2 339 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Tmem17Q8K0U3 198 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Seh1lQ8R2U0 360 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Sco2Q8VCL2 255 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Olfr1094Q8VF13 330 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Uxs1Q91XL3 420 aa14.05□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 87.1 ms