RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 SRSF4Q08170 494 aaKnown RBP18.24■□□□□ 0.51
SRRT-218ENST00000620394 GPR157Q5UAW9 335 aa18.24■□□□□ 0.51
SRRT-218ENST00000620394 AQP12AQ8IXF9 295 aa18.24■□□□□ 0.51
SRRT-218ENST00000620394 C11orf53Q8IXP5 236 aa18.24■□□□□ 0.51
SRRT-218ENST00000620394 KIR3DL3Q8N743 410 aa18.24■□□□□ 0.51
SRRT-218ENST00000620394 BOLLQ8N9W6 283 aaKnown RBP18.24■□□□□ 0.51
SRRT-218ENST00000620394 OR8S1Q8NH09 359 aa18.24■□□□□ 0.51
SRRT-218ENST00000620394 TBX15Q96SF7 602 aa18.24■□□□□ 0.51
SRRT-218ENST00000620394 TLNRD1Q9H1K6 362 aa18.24■□□□□ 0.51
SRRT-218ENST00000620394 RGCCQ9H4X1 137 aa18.24■□□□□ 0.51
SRRT-218ENST00000620394 ZNF319Q9P2F9 582 aa18.24■□□□□ 0.51
SRRT-218ENST00000620394 N6AMT1Q9Y5N5 214 aa18.24■□□□□ 0.51
SRRT-218ENST00000620394 hCG_1807616A0A1W2PRN6 198 aa18.23■□□□□ 0.51
SRRT-218ENST00000620394 FAM181BA6NEQ2 426 aa18.23■□□□□ 0.51
SRRT-218ENST00000620394 P2RY10O00398 339 aa18.23■□□□□ 0.51
SRRT-218ENST00000620394 TIPRLO75663 272 aa18.23■□□□□ 0.51
SRRT-218ENST00000620394 SFTPBP07988 381 aa18.23■□□□□ 0.51
SRRT-218ENST00000620394 PAICSP22234 425 aaKnown RBP18.23■□□□□ 0.51
SRRT-218ENST00000620394 DEFB112Q30KQ8 113 aa18.23■□□□□ 0.51
SRRT-218ENST00000620394 OLFML2AQ68BL7 652 aa18.23■□□□□ 0.51
SRRT-218ENST00000620394 FAM57BQ71RH2 274 aa18.23■□□□□ 0.51
SRRT-218ENST00000620394 TMEM179BQ7Z7N9 219 aa18.23■□□□□ 0.51
SRRT-218ENST00000620394 PNLDC1Q8NA58 520 aaKnown RBP18.23■□□□□ 0.51
SRRT-218ENST00000620394 OR1M1Q8NGA1 313 aa18.23■□□□□ 0.51
SRRT-218ENST00000620394 OTOSQ8NHW6 89 aa18.23■□□□□ 0.51
SRRT-218ENST00000620394 SIRPDQ9H106 197 aa18.23■□□□□ 0.51
SRRT-218ENST00000620394 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.22■□□□□ 0.51
SRRT-218ENST00000620394 PRODHO43272 600 aa18.22■□□□□ 0.51
SRRT-218ENST00000620394 NDUFA7O95182 113 aa18.22■□□□□ 0.51
SRRT-218ENST00000620394 GYPAP02724 150 aa18.22■□□□□ 0.51
SRRT-218ENST00000620394 GSK3AP49840 483 aa18.22■□□□□ 0.51
SRRT-218ENST00000620394 WDR82Q6UXN9 313 aa18.22■□□□□ 0.51
SRRT-218ENST00000620394 ZNF454Q8N9F8 522 aa18.22■□□□□ 0.51
SRRT-218ENST00000620394 CSNK2A3Q8NEV1 391 aa18.22■□□□□ 0.51
SRRT-218ENST00000620394 CANT1Q8WVQ1 401 aa18.22■□□□□ 0.51
SRRT-218ENST00000620394 UBE2FQ969M7 185 aa18.22■□□□□ 0.51
SRRT-218ENST00000620394 ZDHHC16Q969W1 377 aa18.22■□□□□ 0.51
SRRT-218ENST00000620394 PCGF1Q9BSM1 259 aa18.22■□□□□ 0.51
SRRT-218ENST00000620394 OR10A2Q9H208 303 aa18.22■□□□□ 0.51
SRRT-218ENST00000620394 NOX4Q9NPH5 578 aa18.22■□□□□ 0.51
SRRT-218ENST00000620394 DNAJC27Q9NZQ0 273 aa18.22■□□□□ 0.51
SRRT-218ENST00000620394 ECDO95905 644 aaPredicted RBP18.21■□□□□ 0.51
SRRT-218ENST00000620394 MUC1P15941 1255 aaPredicted RBP18.21■□□□□ 0.51
SRRT-218ENST00000620394 SNCBQ16143 134 aa18.21■□□□□ 0.51
SRRT-218ENST00000620394 LRRC29Q8WV35 223 aa18.21■□□□□ 0.51
SRRT-218ENST00000620394 ITPKCQ96DU7 683 aa18.21■□□□□ 0.51
SRRT-218ENST00000620394 WDFY2Q96P53 400 aa18.21■□□□□ 0.51
SRRT-218ENST00000620394 KIF17Q9P2E2 1029 aa18.21■□□□□ 0.51
SRRT-218ENST00000620394 CLPSL1A2RUU4 121 aa18.2■□□□□ 0.5
SRRT-218ENST00000620394 PRR23D1E9PI22 279 aaPredicted RBP18.2■□□□□ 0.5
SRRT-218ENST00000620394 DVL1O14640 695 aa18.2■□□□□ 0.5
SRRT-218ENST00000620394 SELENOFO60613 162 aa18.2■□□□□ 0.5
SRRT-218ENST00000620394 TOX4O94842 621 aa18.2■□□□□ 0.5
SRRT-218ENST00000620394 LYNP07948 512 aa18.2■□□□□ 0.5
SRRT-218ENST00000620394 H2BFMP0C1H6 154 aa18.2■□□□□ 0.5
SRRT-218ENST00000620394 PRR23D2P0DMB1 279 aaPredicted RBP18.2■□□□□ 0.5
SRRT-218ENST00000620394 PSMA6P60900 246 aaKnown RBP18.2■□□□□ 0.5
SRRT-218ENST00000620394 CSNK2BP67870 215 aa18.2■□□□□ 0.5
SRRT-218ENST00000620394 CDK5Q00535 292 aa18.2■□□□□ 0.5
SRRT-218ENST00000620394 GINS1Q14691 196 aa18.2■□□□□ 0.5
SRRT-218ENST00000620394 RUSC1-AS1Q66K80 236 aa18.2■□□□□ 0.5
SRRT-218ENST00000620394 PLBD1Q6P4A8 553 aa18.2■□□□□ 0.5
SRRT-218ENST00000620394 FIP1L1Q6UN15 594 aaKnown RBP18.2■□□□□ 0.5
SRRT-218ENST00000620394 Q6YL49 198 aa18.2■□□□□ 0.5
SRRT-218ENST00000620394 FTMTQ8N4E7 242 aa18.2■□□□□ 0.5
SRRT-218ENST00000620394 TMEM86BQ8N661 226 aa18.2■□□□□ 0.5
SRRT-218ENST00000620394 C12orf43Q96C57 262 aaKnown RBP18.2■□□□□ 0.5
SRRT-218ENST00000620394 THTPAQ9BU02 230 aa18.2■□□□□ 0.5
SRRT-218ENST00000620394 PAPOLGQ9BWT3 736 aaKnown RBP18.2■□□□□ 0.5
SRRT-218ENST00000620394 OR51V1Q9H2C8 321 aa18.2■□□□□ 0.5
SRRT-218ENST00000620394 C1RLQ9NZP8 487 aa18.2■□□□□ 0.5
SRRT-218ENST00000620394 RHBDD3Q9Y3P4 386 aa18.2■□□□□ 0.5
SRRT-218ENST00000620394 IGHV3OR15-7A0A075B7D8 119 aa18.19■□□□□ 0.5
SRRT-218ENST00000620394 CENPVL3A0A0U1RRI6 287 aa18.19■□□□□ 0.5
SRRT-218ENST00000620394 OSMP13725 252 aa18.19■□□□□ 0.5
SRRT-218ENST00000620394 SLC2A5P22732 501 aa18.19■□□□□ 0.5
SRRT-218ENST00000620394 RPL15P61313 204 aaKnown RBP18.19■□□□□ 0.5
SRRT-218ENST00000620394 PDCD1Q15116 288 aa18.19■□□□□ 0.5
SRRT-218ENST00000620394 MICBQ29980 383 aa18.19■□□□□ 0.5
SRRT-218ENST00000620394 SLC35D3Q5M8T2 416 aa18.19■□□□□ 0.5
SRRT-218ENST00000620394 METTL11BQ5VVY1 283 aa18.19■□□□□ 0.5
SRRT-218ENST00000620394 BTN2A1Q7KYR7 527 aa18.19■□□□□ 0.5
SRRT-218ENST00000620394 GALNT4Q8N4A0 578 aa18.19■□□□□ 0.5
SRRT-218ENST00000620394 OTULINQ96BN8 352 aa18.19■□□□□ 0.5
SRRT-218ENST00000620394 PGAM5Q96HS1 289 aa18.19■□□□□ 0.5
SRRT-218ENST00000620394 DMRTB1Q96MA1 342 aa18.19■□□□□ 0.5
SRRT-218ENST00000620394 RBM4BQ9BQ04 359 aaKnown RBP18.19■□□□□ 0.5
SRRT-218ENST00000620394 RASSF4Q9H2L5 321 aa18.19■□□□□ 0.5
SRRT-218ENST00000620394 PPP1R3EQ9H7J1 279 aa18.19■□□□□ 0.5
SRRT-218ENST00000620394 ABCB9Q9NP78 766 aa18.19■□□□□ 0.5
SRRT-218ENST00000620394 RPUSD1Q9UJJ7 312 aaKnown RBP18.19■□□□□ 0.5
SRRT-218ENST00000620394 MPC1Q9Y5U8 109 aa18.19■□□□□ 0.5
SRRT-218ENST00000620394 HMGN1P05114 100 aa18.18■□□□□ 0.5
SRRT-218ENST00000620394 ACKR3P25106 362 aa18.18■□□□□ 0.5
SRRT-218ENST00000620394 POU1F1P28069 291 aa18.18■□□□□ 0.5
SRRT-218ENST00000620394 GNALP38405 381 aa18.18■□□□□ 0.5
SRRT-218ENST00000620394 RELBQ01201 579 aa18.18■□□□□ 0.5
SRRT-218ENST00000620394 IL5RAQ01344 420 aa18.18■□□□□ 0.5
SRRT-218ENST00000620394 GFOD2Q3B7J2 385 aa18.18■□□□□ 0.5
SRRT-218ENST00000620394 HS3ST5Q8IZT8 346 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms