RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 RPL27P61353 136 aaKnown RBP11.44□□□□□ -0.58
TCF4-248ENST00000616053 SOWAHCQ53LP3 525 aaPredicted RBP11.44□□□□□ -0.58
TCF4-248ENST00000616053 BHLHA15Q7RTS1 189 aaPredicted RBP11.44□□□□□ -0.58
TCF4-248ENST00000616053 ARL6IP6Q8N6S5 226 aa11.44□□□□□ -0.58
TCF4-248ENST00000616053 OR4C5Q8NGB2 326 aa11.44□□□□□ -0.58
TCF4-248ENST00000616053 FAAP24Q9BTP7 215 aa11.44□□□□□ -0.58
TCF4-248ENST00000616053 HDAC8Q9BY41 377 aa11.44□□□□□ -0.58
TCF4-248ENST00000616053 CXXC4Q9H2H0 198 aa11.44□□□□□ -0.58
TCF4-248ENST00000616053 TMEM140Q9NV12 185 aa11.44□□□□□ -0.58
TCF4-248ENST00000616053 TEX264Q9Y6I9 313 aa11.44□□□□□ -0.58
TCF4-248ENST00000616053 LANCL1O43813 399 aa11.44□□□□□ -0.58
TCF4-248ENST00000616053 KLF7O75840 302 aaPredicted RBP11.44□□□□□ -0.58
TCF4-248ENST00000616053 SPANXN1Q5VSR9 72 aa11.44□□□□□ -0.58
TCF4-248ENST00000616053 MYOZ3Q8TDC0 251 aa11.44□□□□□ -0.58
TCF4-248ENST00000616053 APOBEC3DQ96AK3 386 aaPredicted RBP11.44□□□□□ -0.58
TCF4-248ENST00000616053 C16orf70Q9BSU1 422 aa11.44□□□□□ -0.58
TCF4-248ENST00000616053 FCGR3BO75015 233 aa11.44□□□□□ -0.58
TCF4-248ENST00000616053 ZGLP1P0C6A0 271 aa11.44□□□□□ -0.58
TCF4-248ENST00000616053 HTRA4P83105 476 aaPredicted RBP11.44□□□□□ -0.58
TCF4-248ENST00000616053 OXGR1Q96P68 337 aa11.44□□□□□ -0.58
TCF4-248ENST00000616053 INSIG2Q9Y5U4 225 aa11.44□□□□□ -0.58
TCF4-248ENST00000616053 SLIT1O75093 1534 aa11.44□□□□□ -0.58
TCF4-248ENST00000616053 IGLV3-22A0A075B6J6 115 aa11.44□□□□□ -0.58
TCF4-248ENST00000616053 UBE2L5PA0A1B0GUS4 154 aa11.44□□□□□ -0.58
TCF4-248ENST00000616053 MEX3AA1L020 520 aaKnown RBP11.44□□□□□ -0.58
TCF4-248ENST00000616053 HSPB2A8KAH6 182 aa11.44□□□□□ -0.58
TCF4-248ENST00000616053 NKX2-5P52952 324 aaPredicted RBP11.44□□□□□ -0.58
TCF4-248ENST00000616053 OR2F1Q13607 317 aa11.44□□□□□ -0.58
TCF4-248ENST00000616053 HSPB2Q16082 182 aa11.44□□□□□ -0.58
TCF4-248ENST00000616053 MEIG1Q5JSS6 88 aa11.44□□□□□ -0.58
TCF4-248ENST00000616053 BLOC1S3Q6QNY0 202 aa11.44□□□□□ -0.58
TCF4-248ENST00000616053 BIRC8Q96P09 236 aa11.44□□□□□ -0.58
TCF4-248ENST00000616053 KLF16Q9BXK1 252 aaPredicted RBP11.44□□□□□ -0.58
TCF4-248ENST00000616053 C12orf10Q9HB07 376 aa11.44□□□□□ -0.58
TCF4-248ENST00000616053 MAP2P11137 1827 aaKnown RBP11.43□□□□□ -0.58
TCF4-248ENST00000616053 EML2O95834 649 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 ACSM4P0C7M7 580 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 EPHA8P29322 1005 aaPredicted RBP11.43□□□□□ -0.58
TCF4-248ENST00000616053 IL11RAQ14626 422 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 Q499Y3 187 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 NPAS1Q99742 590 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 B3GALT5Q9Y2C3 310 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 TMEM238LA0A1B0GVL6 79 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 A6NJY4 79 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 CHRM2P08172 466 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 PPOXP50336 477 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 SYPL1Q16563 259 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 TMEM183BQ1AE95 376 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 FAM209BQ5JX69 171 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 ZNF787Q6DD87 383 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 PLD6Q8N2A8 252 aaKnown RBP11.43□□□□□ -0.58
TCF4-248ENST00000616053 OR4B1Q8NGF8 309 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 OR10Z1Q8NGY1 313 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 TMEM18Q96B42 140 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 GNPNAT1Q96EK6 184 aaPredicted RBP11.43□□□□□ -0.58
TCF4-248ENST00000616053 SFRP2Q96HF1 295 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 MMP28Q9H239 520 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 FZD6O60353 706 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 SLC6A12P48065 614 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 SLC25A11Q02978 314 aaKnown RBP11.43□□□□□ -0.58
TCF4-248ENST00000616053 KLRB1Q12918 225 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 PLAG1Q6DJT9 500 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 CCDC144NLQ6NUI1 221 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 PRSS48Q7RTY5 328 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 ZNF480Q8WV37 535 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 NRIP3Q9NQ35 241 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 LINC01387J3KSC0 135 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 ATP6V1FQ16864 119 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 FAHD1Q6P587 224 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 FAM3DQ96BQ1 224 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 EAF1Q96JC9 268 aaPredicted RBP11.43□□□□□ -0.58
TCF4-248ENST00000616053 KCNK15Q9H427 330 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 ANKUB1A6NFN9 424 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 TNFSF14O43557 240 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 SOX8P57073 446 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 LHX8Q68G74 356 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 ZNF738Q8NE65 137 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 FAM210BQ96KR6 192 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 PARP11Q9NR21 331 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 FBXO8Q9NRD0 319 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 KCPQ6ZWJ8 1503 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 ZNF195O14628 629 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 CD14P08571 375 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 SSTR2P30874 369 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 ZNF154Q13106 437 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 TMEM102Q8N9M5 508 aaPredicted RBP11.43□□□□□ -0.58
TCF4-248ENST00000616053 MORN4Q8NDC4 146 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 BAHD1Q8TBE0 780 aaPredicted RBP11.43□□□□□ -0.58
TCF4-248ENST00000616053 RASD2Q96D21 266 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 MAGT1Q9H0U3 335 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 SHROOM3Q8TF72 1996 aa11.43□□□□□ -0.58
TCF4-248ENST00000616053 TMPRSS11DO60235 418 aa11.42□□□□□ -0.58
TCF4-248ENST00000616053 KIR2DS2P43631 304 aa11.42□□□□□ -0.58
TCF4-248ENST00000616053 SHBQ15464 509 aa11.42□□□□□ -0.58
TCF4-248ENST00000616053 CORO6Q6QEF8 472 aa11.42□□□□□ -0.58
TCF4-248ENST00000616053 GLCCI1Q86VQ1 547 aa11.42□□□□□ -0.58
TCF4-248ENST00000616053 ZNF418Q8TF45 676 aaPredicted RBP11.42□□□□□ -0.58
TCF4-248ENST00000616053 COPS9Q8WXC6 57 aa11.42□□□□□ -0.58
TCF4-248ENST00000616053 LURAP1Q96LR2 239 aa11.42□□□□□ -0.58
TCF4-248ENST00000616053 DEDDO75618 318 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms