RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 KCTD8Q6ZWB6 473 aa11.23□□□□□ -0.61
SENP3-209ENST00000610454 THAP5Q7Z6K1 395 aa11.23□□□□□ -0.61
SENP3-209ENST00000610454 RFLNBQ8N5W9 214 aa11.23□□□□□ -0.61
SENP3-209ENST00000610454 DEFB108BQ8NET1 73 aa11.23□□□□□ -0.61
SENP3-209ENST00000610454 NANPQ8TBE9 248 aa11.23□□□□□ -0.61
SENP3-209ENST00000610454 HIST1H2AAQ96QV6 131 aa11.23□□□□□ -0.61
SENP3-209ENST00000610454 C9orf16Q9BUW7 83 aa11.23□□□□□ -0.61
SENP3-209ENST00000610454 MRI1Q9BV20 369 aa11.23□□□□□ -0.61
SENP3-209ENST00000610454 MOB1AQ9H8S9 216 aa11.23□□□□□ -0.61
SENP3-209ENST00000610454 TMEM165Q9HC07 324 aa11.23□□□□□ -0.61
SENP3-209ENST00000610454 FAM206AQ9NX38 181 aa11.23□□□□□ -0.61
SENP3-209ENST00000610454 COPS3Q9UNS2 423 aa11.23□□□□□ -0.61
SENP3-209ENST00000610454 RHBDD3Q9Y3P4 386 aa11.23□□□□□ -0.61
SENP3-209ENST00000610454 MPC1Q9Y5U8 109 aa11.23□□□□□ -0.61
SENP3-209ENST00000610454 COL6A5A8TX70 2615 aa11.22□□□□□ -0.61
SENP3-209ENST00000610454 LOC105371242A0A075B767 164 aa11.22□□□□□ -0.61
SENP3-209ENST00000610454 TRAV38-1A0A0B4J264 116 aa11.22□□□□□ -0.61
SENP3-209ENST00000610454 A0A0U1RQV5 110 aa11.22□□□□□ -0.61
SENP3-209ENST00000610454 A8MXK9 166 aa11.22□□□□□ -0.61
SENP3-209ENST00000610454 F5H0A9 414 aaPredicted RBP11.22□□□□□ -0.61
SENP3-209ENST00000610454 C3orf80F5H4A9 247 aa11.22□□□□□ -0.61
SENP3-209ENST00000610454 LOC110117498-PIK3R3F6TDL0 507 aa11.22□□□□□ -0.61
SENP3-209ENST00000610454 TCF21O43680 179 aa11.22□□□□□ -0.61
SENP3-209ENST00000610454 MTRF1O75570 445 aaKnown RBP11.22□□□□□ -0.61
SENP3-209ENST00000610454 PTBP3O95758 552 aaKnown RBP11.22□□□□□ -0.61
SENP3-209ENST00000610454 KRT8P05787 483 aa11.22□□□□□ -0.61
SENP3-209ENST00000610454 WNT2P09544 360 aa11.22□□□□□ -0.61
SENP3-209ENST00000610454 ZFP36P26651 326 aaKnown RBP11.22□□□□□ -0.61
SENP3-209ENST00000610454 PITPNBP48739 271 aa11.22□□□□□ -0.61
SENP3-209ENST00000610454 SEC61A1P61619 476 aaKnown RBP11.22□□□□□ -0.61
SENP3-209ENST00000610454 EGR3Q06889 387 aa11.22□□□□□ -0.61
SENP3-209ENST00000610454 PRDX4Q13162 271 aa11.22□□□□□ -0.61
SENP3-209ENST00000610454 ZIK1Q3SY52 487 aaPredicted RBP11.22□□□□□ -0.61
SENP3-209ENST00000610454 DOCK11Q5JSL3 2073 aa11.22□□□□□ -0.61
SENP3-209ENST00000610454 BCL2L15Q5TBC7 163 aa11.22□□□□□ -0.61
SENP3-209ENST00000610454 BTNL3Q6UXE8 466 aa11.22□□□□□ -0.61
SENP3-209ENST00000610454 ZDHHC23Q8IYP9 409 aa11.22□□□□□ -0.61
SENP3-209ENST00000610454 CBR4Q8N4T8 237 aa11.22□□□□□ -0.61
SENP3-209ENST00000610454 TRUB1Q8WWH5 349 aaKnown RBP11.22□□□□□ -0.61
SENP3-209ENST00000610454 PIGCQ92535 297 aa11.22□□□□□ -0.61
SENP3-209ENST00000610454 ITFG2Q969R8 447 aa11.22□□□□□ -0.61
SENP3-209ENST00000610454 FAM71F1Q96KD3 344 aaPredicted RBP11.22□□□□□ -0.61
SENP3-209ENST00000610454 TBX5Q99593 518 aa11.22□□□□□ -0.61
SENP3-209ENST00000610454 TMPRSS13Q9BYE2 586 aa11.22□□□□□ -0.61
SENP3-209ENST00000610454 PBOV1Q9GZY1 135 aa11.22□□□□□ -0.61
SENP3-209ENST00000610454 S100A14Q9HCY8 104 aa11.22□□□□□ -0.61
SENP3-209ENST00000610454 USE1Q9NZ43 259 aa11.22□□□□□ -0.61
SENP3-209ENST00000610454 CLN8Q9UBY8 286 aa11.22□□□□□ -0.61
SENP3-209ENST00000610454 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.22□□□□□ -0.61
SENP3-209ENST00000610454 ARHGAP32A7KAX9 2087 aa11.21□□□□□ -0.61
SENP3-209ENST00000610454 ZNF816-ZNF321PA0A0X1KG74 233 aa11.21□□□□□ -0.61
SENP3-209ENST00000610454 OOEPA6NGQ2 149 aa11.21□□□□□ -0.61
SENP3-209ENST00000610454 TMEM210A6NLX4 147 aa11.21□□□□□ -0.61
SENP3-209ENST00000610454 SNTNA6NMZ2 147 aa11.21□□□□□ -0.61
SENP3-209ENST00000610454 ZNF850A8MQ14 1090 aa11.21□□□□□ -0.61
SENP3-209ENST00000610454 LGALS8O00214 317 aa11.21□□□□□ -0.61
SENP3-209ENST00000610454 NDUFA2O43678 99 aa11.21□□□□□ -0.61
SENP3-209ENST00000610454 CST4P01036 141 aa11.21□□□□□ -0.61
SENP3-209ENST00000610454 OR2T7P0C7T2 308 aa11.21□□□□□ -0.61
SENP3-209ENST00000610454 ATP6V1B1P15313 513 aa11.21□□□□□ -0.61
SENP3-209ENST00000610454 EPHA1P21709 976 aa11.21□□□□□ -0.61
SENP3-209ENST00000610454 CD80P33681 288 aa11.21□□□□□ -0.61
SENP3-209ENST00000610454 ZNF154Q13106 437 aa11.21□□□□□ -0.61
SENP3-209ENST00000610454 TMED1Q13445 227 aa11.21□□□□□ -0.61
SENP3-209ENST00000610454 ARMCX4Q5H9R4 360 aa11.21□□□□□ -0.61
SENP3-209ENST00000610454 SFRP4Q6FHJ7 346 aaPredicted RBP11.21□□□□□ -0.61
SENP3-209ENST00000610454 C1QL2Q7Z5L3 287 aa11.21□□□□□ -0.61
SENP3-209ENST00000610454 YIPF7Q8N8F6 280 aa11.21□□□□□ -0.61
SENP3-209ENST00000610454 C19orf18Q8NEA5 215 aa11.21□□□□□ -0.61
SENP3-209ENST00000610454 SEMA6DQ8NFY4 1073 aa11.21□□□□□ -0.61
SENP3-209ENST00000610454 OR1M1Q8NGA1 313 aa11.21□□□□□ -0.61
SENP3-209ENST00000610454 OR10H4Q8NGA5 316 aa11.21□□□□□ -0.61
SENP3-209ENST00000610454 OR2T27Q8NH04 317 aa11.21□□□□□ -0.61
SENP3-209ENST00000610454 OR51E1Q8TCB6 317 aa11.21□□□□□ -0.61
SENP3-209ENST00000610454 EME1Q96AY2 570 aa11.21□□□□□ -0.61
SENP3-209ENST00000610454 LYZL4Q96KX0 146 aa11.21□□□□□ -0.61
SENP3-209ENST00000610454 TECTBQ96PL2 329 aa11.21□□□□□ -0.61
SENP3-209ENST00000610454 MDFIQ99750 246 aa11.21□□□□□ -0.61
SENP3-209ENST00000610454 APOL4Q9BPW4 351 aa11.21□□□□□ -0.61
SENP3-209ENST00000610454 RNPEPL1Q9HAU8 725 aa11.21□□□□□ -0.61
SENP3-209ENST00000610454 GPR84Q9NQS5 396 aa11.21□□□□□ -0.61
SENP3-209ENST00000610454 NUFIP1Q9UHK0 495 aaKnown RBP11.21□□□□□ -0.61
SENP3-209ENST00000610454 FBN1P35555 2871 aaKnown RBP11.21□□□□□ -0.62
SENP3-209ENST00000610454 CUBNO60494 3623 aa11.2□□□□□ -0.62
SENP3-209ENST00000610454 ADAM20O43506 726 aa11.2□□□□□ -0.62
SENP3-209ENST00000610454 RPP14O95059 124 aaKnown RBP11.2□□□□□ -0.62
SENP3-209ENST00000610454 APOL3O95236 402 aa11.2□□□□□ -0.62
SENP3-209ENST00000610454 BAG2O95816 211 aa11.2□□□□□ -0.62
SENP3-209ENST00000610454 ACKR3P25106 362 aa11.2□□□□□ -0.62
SENP3-209ENST00000610454 NPY4RP50391 375 aa11.2□□□□□ -0.62
SENP3-209ENST00000610454 MFGE8Q08431 387 aaPredicted RBP11.2□□□□□ -0.62
SENP3-209ENST00000610454 RIPPLY1Q0D2K3 151 aa11.2□□□□□ -0.62
SENP3-209ENST00000610454 MICBQ29980 383 aa11.2□□□□□ -0.62
SENP3-209ENST00000610454 MEDAGQ5VYS4 303 aa11.2□□□□□ -0.62
SENP3-209ENST00000610454 ZBTB49Q6ZSB9 765 aa11.2□□□□□ -0.62
SENP3-209ENST00000610454 ZNF826PQ6ZT77 177 aa11.2□□□□□ -0.62
SENP3-209ENST00000610454 FAM220AQ7Z4H9 259 aa11.2□□□□□ -0.62
SENP3-209ENST00000610454 PQLC1Q8N2U9 271 aa11.2□□□□□ -0.62
SENP3-209ENST00000610454 GALNT4Q8N4A0 578 aa11.2□□□□□ -0.62
SENP3-209ENST00000610454 ZNF418Q8TF45 676 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms