RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 CA6P23280 308 aa12.95□□□□□ -0.34
ATG4D-211ENST00000589753 GNALP38405 381 aa12.95□□□□□ -0.34
ATG4D-211ENST00000589753 ZNF81P51508 661 aa12.95□□□□□ -0.34
ATG4D-211ENST00000589753 ACSM3Q53FZ2 586 aa12.95□□□□□ -0.34
ATG4D-211ENST00000589753 C11orf71Q6IPW1 123 aa12.95□□□□□ -0.34
ATG4D-211ENST00000589753 Q6ZR03 302 aa12.95□□□□□ -0.34
ATG4D-211ENST00000589753 KRT74Q7RTS7 529 aa12.95□□□□□ -0.34
ATG4D-211ENST00000589753 OR13G1Q8NGZ3 307 aa12.95□□□□□ -0.34
ATG4D-211ENST00000589753 PIGCQ92535 297 aa12.95□□□□□ -0.34
ATG4D-211ENST00000589753 GTF3AQ92664 365 aaKnown RBP12.95□□□□□ -0.34
ATG4D-211ENST00000589753 THRSPQ92748 146 aa12.95□□□□□ -0.34
ATG4D-211ENST00000589753 PIGTQ969N2 578 aa12.95□□□□□ -0.34
ATG4D-211ENST00000589753 TMEM106AQ96A25 262 aa12.95□□□□□ -0.34
ATG4D-211ENST00000589753 ADAT3Q96EY9 351 aaPredicted RBP12.95□□□□□ -0.34
ATG4D-211ENST00000589753 OR14A2Q96R54 314 aa12.95□□□□□ -0.34
ATG4D-211ENST00000589753 SLC22A4Q9H015 551 aa12.95□□□□□ -0.34
ATG4D-211ENST00000589753 ZSCAN5BA6NJL1 495 aa12.94□□□□□ -0.34
ATG4D-211ENST00000589753 ZNF850A8MQ14 1090 aa12.94□□□□□ -0.34
ATG4D-211ENST00000589753 SC5DO75845 299 aa12.94□□□□□ -0.34
ATG4D-211ENST00000589753 RGS9O75916 674 aaPredicted RBP12.94□□□□□ -0.34
ATG4D-211ENST00000589753 CD36P16671 472 aa12.94□□□□□ -0.34
ATG4D-211ENST00000589753 MAPK3P27361 379 aaPredicted RBP12.94□□□□□ -0.34
ATG4D-211ENST00000589753 TGFBR2P37173 567 aa12.94□□□□□ -0.34
ATG4D-211ENST00000589753 RPL5P46777 297 aaKnown RBP12.94□□□□□ -0.34
ATG4D-211ENST00000589753 ALDH3B2P48448 385 aa12.94□□□□□ -0.34
ATG4D-211ENST00000589753 PPOXP50336 477 aa12.94□□□□□ -0.34
ATG4D-211ENST00000589753 FABP5Q01469 135 aa12.94□□□□□ -0.34
ATG4D-211ENST00000589753 PRDX4Q13162 271 aa12.94□□□□□ -0.34
ATG4D-211ENST00000589753 CLVS2Q5SYC1 327 aa12.94□□□□□ -0.34
ATG4D-211ENST00000589753 TMEM42Q69YG0 159 aa12.94□□□□□ -0.34
ATG4D-211ENST00000589753 SERPINA12Q8IW75 414 aa12.94□□□□□ -0.34
ATG4D-211ENST00000589753 PARP16Q8N5Y8 322 aa12.94□□□□□ -0.34
ATG4D-211ENST00000589753 OR13F1Q8NGS4 319 aa12.94□□□□□ -0.34
ATG4D-211ENST00000589753 PP6455Q8WZ26 134 aa12.94□□□□□ -0.34
ATG4D-211ENST00000589753 CHST5Q9GZS9 411 aa12.94□□□□□ -0.34
ATG4D-211ENST00000589753 MS4A5Q9H3V2 200 aa12.94□□□□□ -0.34
ATG4D-211ENST00000589753 ABCB9Q9NP78 766 aa12.94□□□□□ -0.34
ATG4D-211ENST00000589753 ZDHHC8Q9ULC8 765 aa12.94□□□□□ -0.34
ATG4D-211ENST00000589753 NOP16Q9Y3C1 178 aaKnown RBP12.94□□□□□ -0.34
ATG4D-211ENST00000589753 MPC1Q9Y5U8 109 aa12.94□□□□□ -0.34
ATG4D-211ENST00000589753 PMF1-BGLAPU3KQ54 211 aa12.94□□□□□ -0.34
ATG4D-211ENST00000589753 TRBV5-7A0A0A0MS05 114 aa12.93□□□□□ -0.34
ATG4D-211ENST00000589753 A0A1B0GWJ7 208 aa12.93□□□□□ -0.34
ATG4D-211ENST00000589753 ANKRD61A6NGH8 418 aa12.93□□□□□ -0.34
ATG4D-211ENST00000589753 C17orf100A8MU93 164 aa12.93□□□□□ -0.34
ATG4D-211ENST00000589753 GABRPO00591 440 aa12.93□□□□□ -0.34
ATG4D-211ENST00000589753 SPRY3O43610 288 aa12.93□□□□□ -0.34
ATG4D-211ENST00000589753 GMDSO60547 372 aa12.93□□□□□ -0.34
ATG4D-211ENST00000589753 GATBO75879 557 aaKnown RBP12.93□□□□□ -0.34
ATG4D-211ENST00000589753 NRASP01111 189 aa12.93□□□□□ -0.34
ATG4D-211ENST00000589753 KRTAP10-9P60411 292 aa12.93□□□□□ -0.34
ATG4D-211ENST00000589753 INSL4Q14641 139 aa12.93□□□□□ -0.34
ATG4D-211ENST00000589753 OR8G1Q15617 311 aa12.93□□□□□ -0.34
ATG4D-211ENST00000589753 CD200R1LQ6Q8B3 271 aa12.93□□□□□ -0.34
ATG4D-211ENST00000589753 UNQ9370/PRO34162Q6UXP9 181 aa12.93□□□□□ -0.34
ATG4D-211ENST00000589753 TMEM91Q6ZNR0 172 aa12.93□□□□□ -0.34
ATG4D-211ENST00000589753 MOB3CQ70IA8 216 aa12.93□□□□□ -0.34
ATG4D-211ENST00000589753 CEACAM19Q7Z692 300 aa12.93□□□□□ -0.34
ATG4D-211ENST00000589753 ZDHHC23Q8IYP9 409 aa12.93□□□□□ -0.34
ATG4D-211ENST00000589753 OR2Z1Q8NG97 314 aa12.93□□□□□ -0.34
ATG4D-211ENST00000589753 OR10AD1Q8NGE0 317 aa12.93□□□□□ -0.34
ATG4D-211ENST00000589753 OR8S1Q8NH09 359 aa12.93□□□□□ -0.34
ATG4D-211ENST00000589753 UBASH3BQ8TF42 649 aa12.93□□□□□ -0.34
ATG4D-211ENST00000589753 TMIGD2Q96BF3 282 aa12.93□□□□□ -0.34
ATG4D-211ENST00000589753 YIPF6Q96EC8 236 aa12.93□□□□□ -0.34
ATG4D-211ENST00000589753 DERL3Q96Q80 235 aa12.93□□□□□ -0.34
ATG4D-211ENST00000589753 DIRC2Q96SL1 478 aa12.93□□□□□ -0.34
ATG4D-211ENST00000589753 CCL19Q99731 98 aa12.93□□□□□ -0.34
ATG4D-211ENST00000589753 ADAT1Q9BUB4 502 aaKnown RBP12.93□□□□□ -0.34
ATG4D-211ENST00000589753 CACNG6Q9BXT2 260 aa12.93□□□□□ -0.34
ATG4D-211ENST00000589753 PPP1R3EQ9H7J1 279 aa12.93□□□□□ -0.34
ATG4D-211ENST00000589753 GPR173Q9NS66 373 aa12.93□□□□□ -0.34
ATG4D-211ENST00000589753 STUB1Q9UNE7 303 aa12.93□□□□□ -0.34
ATG4D-211ENST00000589753 SETXQ7Z333 2677 aaKnown RBP12.93□□□□□ -0.34
ATG4D-211ENST00000589753 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.92□□□□□ -0.34
ATG4D-211ENST00000589753 TRDV1A0A1B0GX56 115 aa12.92□□□□□ -0.34
ATG4D-211ENST00000589753 A0A1W2PPK0 400 aa12.92□□□□□ -0.34
ATG4D-211ENST00000589753 ANXA2P2A6NMY6 339 aa12.92□□□□□ -0.34
ATG4D-211ENST00000589753 H0YL77 283 aa12.92□□□□□ -0.34
ATG4D-211ENST00000589753 MLNRO43193 412 aa12.92□□□□□ -0.34
ATG4D-211ENST00000589753 IGHV1-46P01743 117 aa12.92□□□□□ -0.34
ATG4D-211ENST00000589753 RAF1P04049 648 aa12.92□□□□□ -0.34
ATG4D-211ENST00000589753 GALP22466 123 aa12.92□□□□□ -0.34
ATG4D-211ENST00000589753 CRYBB2P43320 205 aa12.92□□□□□ -0.34
ATG4D-211ENST00000589753 CEP78Q5JTW2 689 aa12.92□□□□□ -0.34
ATG4D-211ENST00000589753 PLCXD3Q63HM9 321 aa12.92□□□□□ -0.34
ATG4D-211ENST00000589753 PAMR1Q6UXH9 720 aa12.92□□□□□ -0.34
ATG4D-211ENST00000589753 UTS2BQ765I0 119 aa12.92□□□□□ -0.34
ATG4D-211ENST00000589753 GPR141Q7Z602 305 aa12.92□□□□□ -0.34
ATG4D-211ENST00000589753 ZCCHC24Q8N2G6 241 aaKnown RBP12.92□□□□□ -0.34
ATG4D-211ENST00000589753 OR5D14Q8NGL3 314 aa12.92□□□□□ -0.34
ATG4D-211ENST00000589753 PHYHIPQ92561 330 aa12.92□□□□□ -0.34
ATG4D-211ENST00000589753 NRGNQ92686 78 aa12.92□□□□□ -0.34
ATG4D-211ENST00000589753 DVL3Q92997 716 aaPredicted RBP12.92□□□□□ -0.34
ATG4D-211ENST00000589753 ELMOD3Q96FG2 381 aa12.92□□□□□ -0.34
ATG4D-211ENST00000589753 TECTBQ96PL2 329 aa12.92□□□□□ -0.34
ATG4D-211ENST00000589753 HIST1H2AAQ96QV6 131 aa12.92□□□□□ -0.34
ATG4D-211ENST00000589753 VRK1Q99986 396 aaPredicted RBP12.92□□□□□ -0.34
ATG4D-211ENST00000589753 TPK1Q9H3S4 243 aa12.92□□□□□ -0.34
ATG4D-211ENST00000589753 LIME1Q9H400 295 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms