RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 PRAMEF20Q5VT98 475 aa11.77□□□□□ -0.53
PCDHGB3-201ENST00000576222 LDLRAD3Q86YD5 345 aa11.77□□□□□ -0.53
PCDHGB3-201ENST00000576222 RFLNBQ8N5W9 214 aa11.77□□□□□ -0.53
PCDHGB3-201ENST00000576222 OR13H1Q8NG92 308 aa11.77□□□□□ -0.53
PCDHGB3-201ENST00000576222 SLC25A38Q96DW6 304 aa11.77□□□□□ -0.53
PCDHGB3-201ENST00000576222 RAB33BQ9H082 229 aa11.77□□□□□ -0.53
PCDHGB3-201ENST00000576222 C8orf33Q9H7E9 229 aaPredicted RBP11.77□□□□□ -0.53
PCDHGB3-201ENST00000576222 NPDC1Q9NQX5 325 aaPredicted RBP11.77□□□□□ -0.53
PCDHGB3-201ENST00000576222 RNF150Q9ULK6 438 aa11.77□□□□□ -0.53
PCDHGB3-201ENST00000576222 A0A1W2PPQ1 181 aa11.77□□□□□ -0.53
PCDHGB3-201ENST00000576222 OR2A4O95047 310 aa11.77□□□□□ -0.53
PCDHGB3-201ENST00000576222 MBP02144 154 aa11.77□□□□□ -0.53
PCDHGB3-201ENST00000576222 TNFRSF4P43489 277 aa11.77□□□□□ -0.53
PCDHGB3-201ENST00000576222 DUSP2Q05923 314 aa11.77□□□□□ -0.53
PCDHGB3-201ENST00000576222 OR2A7Q96R45 310 aa11.77□□□□□ -0.53
PCDHGB3-201ENST00000576222 ZNF107Q9UII5 783 aaPredicted RBP11.77□□□□□ -0.53
PCDHGB3-201ENST00000576222 KIAA0100Q14667 2235 aaKnown RBP11.77□□□□□ -0.53
PCDHGB3-201ENST00000576222 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.77□□□□□ -0.53
PCDHGB3-201ENST00000576222 RNF212BA8MTL3 300 aa11.77□□□□□ -0.53
PCDHGB3-201ENST00000576222 MPTX1A8MV57 137 aa11.77□□□□□ -0.53
PCDHGB3-201ENST00000576222 GATCO43716 136 aaKnown RBP11.77□□□□□ -0.53
PCDHGB3-201ENST00000576222 CST7O76096 145 aa11.77□□□□□ -0.53
PCDHGB3-201ENST00000576222 NPBWR1P48145 328 aa11.77□□□□□ -0.53
PCDHGB3-201ENST00000576222 ZNF121P58317 390 aaPredicted RBP11.77□□□□□ -0.53
PCDHGB3-201ENST00000576222 BRICD5Q6PL45 260 aa11.77□□□□□ -0.53
PCDHGB3-201ENST00000576222 CLEC18BQ6UXF7 455 aa11.77□□□□□ -0.53
PCDHGB3-201ENST00000576222 PRSS41Q7RTY9 318 aa11.77□□□□□ -0.53
PCDHGB3-201ENST00000576222 OR52N4Q8NGI2 321 aa11.77□□□□□ -0.53
PCDHGB3-201ENST00000576222 CLDN34H7C241 214 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 SULT1A1P50225 295 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 ZP1P60852 638 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 SRYQ05066 204 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 NCR3LG1Q68D85 454 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 LIPHQ8WWY8 451 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 C11orf40Q8WZ69 217 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 SBF2Q86WG5 1849 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 A0A087X0M5 115 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 KIR2DS1A0A191URI9 304 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 A0A1B0GX30 115 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 CD1AP06126 327 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 GUSBP08236 651 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 CT62P0C5K7 136 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 MSR1P21757 451 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 IL2RGP31785 369 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 SNCAP37840 140 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 KIR2DS4P43632 304 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 KIR2DS1Q14954 304 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 CDC20BQ86Y33 519 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 IL22RA1Q8N6P7 574 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 OR13D1Q8NGV5 346 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 OR2A5Q96R48 311 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 PLEKHF2Q9H8W4 249 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 KLF15Q9UIH9 416 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 TRIP12Q14669 1992 aaPredicted RBP11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 TLCD2A6NGC4 264 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 ASCL1P50553 236 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 NOVA1P51513 510 aaKnown RBP11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 ENDOGQ14249 297 aaKnown RBP11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 NKAIN2Q5VXU1 208 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 TFAP2EQ6VUC0 442 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 FBXO17Q96EF6 278 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 PRSS27Q9BQR3 290 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 TLNRD1Q9H1K6 362 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 OR51I2Q9H344 312 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 PRR13Q9NZ81 148 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 TRAPPC2LQ9UL33 140 aa11.76□□□□□ -0.53
PCDHGB3-201ENST00000576222 A8MXK9 166 aa11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 NAAAQ02083 359 aa11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 TMEM104Q8NE00 496 aa11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 WNT2BQ93097 391 aa11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 FAM210BQ96KR6 192 aa11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 ASB16Q96NS5 453 aa11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 B4GALT7Q9UBV7 327 aa11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 OSGIN2Q9Y236 505 aa11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 METTL15P1P0C7V9 234 aa11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 HLA-DOBP13765 273 aa11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 CATR1Q13166 79 aa11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 COL13A1Q5TAT6 717 aaPredicted RBP11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 DEGS2Q6QHC5 323 aa11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 AAED1Q7RTV5 226 aa11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 GPR119Q8TDV5 335 aa11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 STRCP1A6NGW2 1772 aa11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 RP1P56715 2156 aa11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 CENPVL1A0A0U1RR11 272 aa11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 A0A1W2PPE2 198 aa11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 CA3P07451 260 aa11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 MSX1P28360 303 aa11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 SLC37A1P57057 533 aa11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 NR0B2Q15466 257 aa11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 ZNF141Q15928 474 aa11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 SPPL3Q8TCT6 385 aa11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 RLN3Q8WXF3 142 aa11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 UHRF2Q96PU4 802 aa11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 M0R135 149 aa11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 ZNF217O75362 1048 aa11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 MUC1P15941 1255 aaPredicted RBP11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 ACKR3P25106 362 aa11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 EIF1P41567 113 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms