RNA–Protein interactions for RNA: ENST00000571456.1

VPS53-210, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 3

Gene VPS53, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-210ENST00000571456 CDCA4Q9BXL8 241 aa17.51■□□□□ 0.39
VPS53-210ENST00000571456 DECR2Q9NUI1 292 aa17.51■□□□□ 0.39
VPS53-210ENST00000571456 IL19Q9UHD0 177 aa17.51■□□□□ 0.39
VPS53-210ENST00000571456 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.5■□□□□ 0.39
VPS53-210ENST00000571456 ZSCAN5BA6NJL1 495 aa17.5■□□□□ 0.39
VPS53-210ENST00000571456 NDUFS8O00217 210 aa17.5■□□□□ 0.39
VPS53-210ENST00000571456 PHF1O43189 567 aaPredicted RBP17.5■□□□□ 0.39
VPS53-210ENST00000571456 DHRS3O75911 302 aa17.5■□□□□ 0.39
VPS53-210ENST00000571456 CCL1P22362 96 aa17.5■□□□□ 0.39
VPS53-210ENST00000571456 CRHBPP24387 322 aa17.5■□□□□ 0.39
VPS53-210ENST00000571456 ETV1P50549 477 aa17.5■□□□□ 0.39
VPS53-210ENST00000571456 TAS2R43P59537 309 aa17.5■□□□□ 0.39
VPS53-210ENST00000571456 GFOD2Q3B7J2 385 aa17.5■□□□□ 0.39
VPS53-210ENST00000571456 TMEM255AQ5JRV8 349 aa17.5■□□□□ 0.39
VPS53-210ENST00000571456 RPL22L1Q6P5R6 122 aaKnown RBP17.5■□□□□ 0.39
VPS53-210ENST00000571456 COMMD2Q86X83 199 aa17.5■□□□□ 0.39
VPS53-210ENST00000571456 OR56B2PQ8NGI1 322 aa17.5■□□□□ 0.39
VPS53-210ENST00000571456 C10orf35Q96D05 121 aa17.5■□□□□ 0.39
VPS53-210ENST00000571456 TRIM36Q9NQ86 728 aa17.5■□□□□ 0.39
VPS53-210ENST00000571456 GPR84Q9NQS5 396 aa17.5■□□□□ 0.39
VPS53-210ENST00000571456 SLC22A13Q9Y226 551 aa17.5■□□□□ 0.39
VPS53-210ENST00000571456 MPC1Q9Y5U8 109 aa17.5■□□□□ 0.39
VPS53-210ENST00000571456 A0A1B0GVI7 797 aa17.49■□□□□ 0.39
VPS53-210ENST00000571456 PTGES3LE9PB15 166 aa17.49■□□□□ 0.39
VPS53-210ENST00000571456 IFNL4K9M1U5 179 aa17.49■□□□□ 0.39
VPS53-210ENST00000571456 IGHV1-46P01743 117 aa17.49■□□□□ 0.39
VPS53-210ENST00000571456 SRP9P49458 86 aaKnown RBP17.49■□□□□ 0.39
VPS53-210ENST00000571456 GABARAPL2P60520 117 aa17.49■□□□□ 0.39
VPS53-210ENST00000571456 RIPPLY1Q0D2K3 151 aa17.49■□□□□ 0.39
VPS53-210ENST00000571456 ALKBH1Q13686 389 aaKnown RBP17.49■□□□□ 0.39
VPS53-210ENST00000571456 ALKBH6Q3KRA9 238 aa17.49■□□□□ 0.39
VPS53-210ENST00000571456 ZNF786Q8N393 782 aa17.49■□□□□ 0.39
VPS53-210ENST00000571456 SEMA6DQ8NFY4 1073 aa17.49■□□□□ 0.39
VPS53-210ENST00000571456 OR51E1Q8TCB6 317 aa17.49■□□□□ 0.39
VPS53-210ENST00000571456 ELMOD3Q96FG2 381 aa17.49■□□□□ 0.39
VPS53-210ENST00000571456 MND1Q9BWT6 205 aa17.49■□□□□ 0.39
VPS53-210ENST00000571456 SAP30LQ9HAJ7 183 aa17.49■□□□□ 0.39
VPS53-210ENST00000571456 MSL2Q9HCI7 577 aa17.49■□□□□ 0.39
VPS53-210ENST00000571456 BABAM2Q9NXR7 383 aa17.49■□□□□ 0.39
VPS53-210ENST00000571456 C5orf63A6NC05 138 aa17.48■□□□□ 0.39
VPS53-210ENST00000571456 TMEM212A6NML5 194 aa17.48■□□□□ 0.39
VPS53-210ENST00000571456 RGS10O43665 173 aa17.48■□□□□ 0.39
VPS53-210ENST00000571456 CST4P01036 141 aa17.48■□□□□ 0.39
VPS53-210ENST00000571456 GNALP38405 381 aa17.48■□□□□ 0.39
VPS53-210ENST00000571456 WNT4P56705 351 aa17.48■□□□□ 0.39
VPS53-210ENST00000571456 WDR38Q5JTN6 314 aa17.48■□□□□ 0.39
VPS53-210ENST00000571456 CLEC2AQ6UVW9 174 aa17.48■□□□□ 0.39
VPS53-210ENST00000571456 PRSS48Q7RTY5 328 aa17.48■□□□□ 0.39
VPS53-210ENST00000571456 OR5AS1Q8N127 324 aa17.48■□□□□ 0.39
VPS53-210ENST00000571456 BHLHE23Q8NDY6 225 aa17.48■□□□□ 0.39
VPS53-210ENST00000571456 OR2Z1Q8NG97 314 aa17.48■□□□□ 0.39
VPS53-210ENST00000571456 UBASH3BQ8TF42 649 aa17.48■□□□□ 0.39
VPS53-210ENST00000571456 RDH5Q92781 318 aa17.48■□□□□ 0.39
VPS53-210ENST00000571456 ERGIC1Q969X5 290 aa17.48■□□□□ 0.39
VPS53-210ENST00000571456 RHNO1Q9BSD3 238 aa17.48■□□□□ 0.39
VPS53-210ENST00000571456 COMMD4Q9H0A8 199 aa17.48■□□□□ 0.39
VPS53-210ENST00000571456 TPK1Q9H3S4 243 aa17.48■□□□□ 0.39
VPS53-210ENST00000571456 ISG20L2Q9H9L3 353 aaKnown RBP17.48■□□□□ 0.39
VPS53-210ENST00000571456 ZNF816-ZNF321PA0A0X1KG74 233 aa17.47■□□□□ 0.39
VPS53-210ENST00000571456 ANXA2P2A6NMY6 339 aa17.47■□□□□ 0.39
VPS53-210ENST00000571456 TPD52L2O43399 206 aaKnown RBP17.47■□□□□ 0.39
VPS53-210ENST00000571456 SYT7O43581 403 aa17.47■□□□□ 0.39
VPS53-210ENST00000571456 SPRY3O43610 288 aa17.47■□□□□ 0.39
VPS53-210ENST00000571456 DAOP14920 347 aa17.47■□□□□ 0.39
VPS53-210ENST00000571456 ANOS1P23352 680 aa17.47■□□□□ 0.39
VPS53-210ENST00000571456 C21orf33P30042 268 aaPredicted RBP17.47■□□□□ 0.39
VPS53-210ENST00000571456 PDLIM4P50479 330 aa17.47■□□□□ 0.39
VPS53-210ENST00000571456 TNFAIP6P98066 277 aaPredicted RBP17.47■□□□□ 0.39
VPS53-210ENST00000571456 BDH1Q02338 343 aa17.47■□□□□ 0.39
VPS53-210ENST00000571456 Q6ZR03 302 aa17.47■□□□□ 0.39
VPS53-210ENST00000571456 PRSS35Q8N3Z0 413 aa17.47■□□□□ 0.39
VPS53-210ENST00000571456 NANOGP1Q8N7R0 232 aa17.47■□□□□ 0.39
VPS53-210ENST00000571456 RNF166Q96A37 237 aaPredicted RBP17.47■□□□□ 0.39
VPS53-210ENST00000571456 LYZL4Q96KX0 146 aa17.47■□□□□ 0.39
VPS53-210ENST00000571456 TECTBQ96PL2 329 aa17.47■□□□□ 0.39
VPS53-210ENST00000571456 C14orf119Q9NWQ9 140 aa17.47■□□□□ 0.39
VPS53-210ENST00000571456 FRRS1LQ9P0K9 344 aa17.47■□□□□ 0.39
VPS53-210ENST00000571456 ENPP5Q9UJA9 477 aa17.47■□□□□ 0.39
VPS53-210ENST00000571456 LRRC42Q9Y546 428 aa17.47■□□□□ 0.39
VPS53-210ENST00000571456 V9GYS6 101 aa17.47■□□□□ 0.39
VPS53-210ENST00000571456 ACHEP22303 614 aa17.46■□□□□ 0.39
VPS53-210ENST00000571456 PSMB10P40306 273 aa17.46■□□□□ 0.39
VPS53-210ENST00000571456 CD200P41217 278 aa17.46■□□□□ 0.39
VPS53-210ENST00000571456 CRYBB2P43320 205 aa17.46■□□□□ 0.39
VPS53-210ENST00000571456 CDH15P55291 814 aa17.46■□□□□ 0.39
VPS53-210ENST00000571456 SLC3A1Q07837 685 aa17.46■□□□□ 0.39
VPS53-210ENST00000571456 ACSM1Q08AH1 577 aa17.46■□□□□ 0.39
VPS53-210ENST00000571456 OR8G1Q15617 311 aa17.46■□□□□ 0.39
VPS53-210ENST00000571456 DNM1P46Q6ZS02 220 aa17.46■□□□□ 0.39
VPS53-210ENST00000571456 ZCCHC24Q8N2G6 241 aaKnown RBP17.46■□□□□ 0.39
VPS53-210ENST00000571456 ADAT1Q9BUB4 502 aaKnown RBP17.46■□□□□ 0.39
VPS53-210ENST00000571456 PLEKHA1Q9HB21 404 aa17.46■□□□□ 0.39
VPS53-210ENST00000571456 HHLA2Q9UM44 414 aa17.46■□□□□ 0.39
VPS53-210ENST00000571456 CR1P17927 2039 aa17.46■□□□□ 0.39
VPS53-210ENST00000571456 A0A1B0GTI1 187 aa17.45■□□□□ 0.38
VPS53-210ENST00000571456 OR4C45A6NMZ5 311 aa17.45■□□□□ 0.38
VPS53-210ENST00000571456 P2RY10O00398 339 aa17.45■□□□□ 0.38
VPS53-210ENST00000571456 SSX4O60224 188 aa17.45■□□□□ 0.38
VPS53-210ENST00000571456 CD1AP06126 327 aa17.45■□□□□ 0.38
VPS53-210ENST00000571456 MAGEB1P43366 347 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms