RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 ZBTB42B2RXF5 422 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 ZNF737O75373 536 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 VENTXO95231 258 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 CLEC3BP05452 202 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 SELEP16581 610 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 IL3RAP26951 378 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 PMELP40967 661 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 APOBEC1P41238 236 aaKnown RBP6.43□□□□□ -1.38
CNOT1-216ENST00000569240 C9orf131Q5VYM1 1079 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 ABHD17CQ6PCB6 329 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 RBMXL3Q8N7X1 1067 aaKnown RBP6.43□□□□□ -1.38
CNOT1-216ENST00000569240 SPHK2Q9NRA0 654 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 TAS2R4Q9NYW5 299 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 TCFL5Q9UL49 500 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 POLDIP2Q9Y2S7 368 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 PTRH2Q9Y3E5 179 aaKnown RBP6.43□□□□□ -1.38
CNOT1-216ENST00000569240 LILRB3O75022 631 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 C1QAP02745 245 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 HIST1H1DP16402 221 aaKnown RBP6.43□□□□□ -1.38
CNOT1-216ENST00000569240 RHOBP62745 196 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 RAB32Q13637 225 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 PRAMEF20Q5VT98 475 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 TGIF2LXQ8IUE1 241 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 PLPP7Q8NBV4 271 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 MOB3AQ96BX8 217 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 OR2A5Q96R48 311 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 FAM103A1Q9BTL3 118 aaKnown RBP6.43□□□□□ -1.38
CNOT1-216ENST00000569240 HINT2Q9BX68 163 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 MED20Q9H944 212 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 ZMIZ1Q9ULJ6 1067 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 FZD1Q9UP38 647 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 A0A1B0GV90 55 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 M0R296 226 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 XRCC2O43543 280 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 ZNF253O75346 499 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 VASPP50552 380 aaPredicted RBP6.43□□□□□ -1.38
CNOT1-216ENST00000569240 YOD1Q5VVQ6 348 aaPredicted RBP6.43□□□□□ -1.38
CNOT1-216ENST00000569240 TRAT1Q6PIZ9 186 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 LANCL3Q6ZV70 420 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 PTPMT1Q8WUK0 201 aaPredicted RBP6.43□□□□□ -1.38
CNOT1-216ENST00000569240 ST8SIA1Q92185 356 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 CLDND1Q9NY35 253 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 ZFP30Q9Y2G7 519 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 PEAK1Q9H792 1746 aa6.43□□□□□ -1.38
CNOT1-216ENST00000569240 CTXND1A0A1B0GTU2 59 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 ZNF891A8MT65 544 aaPredicted RBP6.42□□□□□ -1.38
CNOT1-216ENST00000569240 GLB1P16278 677 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 CARD18P57730 90 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 C6orf132Q5T0Z8 1188 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 TMEM207Q6UWW9 146 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 H1FNTQ75WM6 255 aaPredicted RBP6.42□□□□□ -1.38
CNOT1-216ENST00000569240 GPRIN1Q7Z2K8 1008 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 TXNIPQ9H3M7 391 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 HS3ST2Q9Y278 367 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 PITX3O75364 302 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 HBZP02008 142 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 VIPR2P41587 438 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 TRNP1Q6NT89 227 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 OR52B4Q8NGK2 314 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 BLNKQ8WV28 456 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 C4orf45Q96LM5 186 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 RTP3Q9BQQ7 232 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 LAT2Q9GZY6 243 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 F5H5K5 113 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 ISLRO14498 428 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 HOXD9P28356 352 aaPredicted RBP6.42□□□□□ -1.38
CNOT1-216ENST00000569240 SEMG2Q02383 582 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 ZNF117Q03924 483 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 VAX1Q5SQQ9 334 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 CYHR1Q6ZMK1 362 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 IKZF5Q9H5V7 419 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 ZNF17P17021 662 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 C17orf67Q0P5P2 114 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 ADAMTSL4Q6UY14 1074 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 FAM57BQ71RH2 274 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 SFRP2Q96HF1 295 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 TOX2Q96NM4 488 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 RAB33BQ9H082 229 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 LSM2Q9Y333 95 aaKnown RBP6.42□□□□□ -1.38
CNOT1-216ENST00000569240 TMEM250H0YL14 139 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 H3BSH0 61 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 P2RY10O00398 339 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 BCL2P10415 239 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 CXCL2P19875 107 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 VDAC1P21796 283 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 VWA1Q6PCB0 445 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 ESPNLQ6ZVH7 1005 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 BARHL1Q9BZE3 327 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 TAAR2Q9P1P5 351 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 RPH3ALQ9UNE2 315 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 ASPDHA6ND91 283 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 H0Y8G0 127 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 H3BMH7 237 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 SSSCA1O60232 199 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 RHBDL1O75783 438 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 TCN2P20062 427 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 ELLP55199 621 aaPredicted RBP6.42□□□□□ -1.38
CNOT1-216ENST00000569240 FAM219AQ8IW50 185 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 CMTM8Q8IZV2 173 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 DMBX1Q8NFW5 382 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms