RNA–Protein interactions for RNA: ENST00000568883.5

PKM-222, Transcript of pyruvate kinase M1/2, human

TSL 5 BASIC

Gene PKM, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-222	ENST00000568883	CDX2	Q99626	313 aa	Predicted RBP	11.17	□□□□□ -0.62
PKM-222	ENST00000568883	ZNF416	Q9BWM5	594 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	ANGPTL4	Q9BY76	406 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	ZNF700	Q9H0M5	742 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	DKKL1	Q9UK85	242 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	GPR132	Q9UNW8	380 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	SIT1	Q9Y3P8	196 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	IGHV1-45	A0A0A0MS14	117 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883		A0A0A6YYD4	124 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	ZNF814	B7Z6K7	855 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	EEF1E1-BLOC1S5	C9J1V9	151 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	SMAD9	O15198	467 aa	Known RBP	11.17	□□□□□ -0.62
PKM-222	ENST00000568883	SOCS1	O15524	211 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	DNPH1	O43598	174 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	SFT2D2	O95562	160 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	IGLV3-1	P01715	115 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	CNR1	P21554	472 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	CPT2	P23786	658 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	AVPR2	P30518	371 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	PTGFR	P43088	359 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	SSR4	P51571	173 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	H3F3A	P84243	136 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	KISS1	Q15726	138 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	INPP5J	Q15735	1006 aa	Predicted RBP	11.17	□□□□□ -0.62
PKM-222	ENST00000568883	PLAC9	Q5JTB6	97 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	UQCC3	Q6UW78	93 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	ARMC10	Q8N2F6	343 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	LHFPL5	Q8TAF8	219 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	SPACA5	Q96QH8	159 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	PIGM	Q9H3S5	423 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	LDAH	Q9H6V9	325 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	TAS2R3	Q9NYW6	316 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	MBD2	Q9UBB5	411 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	PCDHGA1	Q9Y5H4	931 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883		V9GYS6	101 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	ADAMTS9	Q9P2N4	1935 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	GON4L	Q3T8J9	2241 aa		11.16	□□□□□ -0.62
PKM-222	ENST00000568883	EXPH5	Q8NEV8	1989 aa		11.16	□□□□□ -0.62
PKM-222	ENST00000568883	TRBV6-7	A0A0A0MS04	114 aa		11.16	□□□□□ -0.62
PKM-222	ENST00000568883	C13orf42	A0A1B0GVH6	325 aa		11.16	□□□□□ -0.62
PKM-222	ENST00000568883	TEX46	H3BTG2	121 aa		11.16	□□□□□ -0.62
PKM-222	ENST00000568883	WDPCP	O95876	746 aa		11.16	□□□□□ -0.62
PKM-222	ENST00000568883	FREM3	P0C091	2139 aa		11.16	□□□□□ -0.62
PKM-222	ENST00000568883	TPT1	P13693	172 aa	Known RBP	11.16	□□□□□ -0.62
PKM-222	ENST00000568883	HOXA6	P31267	233 aa		11.16	□□□□□ -0.62
PKM-222	ENST00000568883	SERPINF1	P36955	418 aa		11.16	□□□□□ -0.62
PKM-222	ENST00000568883	SLC6A9	P48067	706 aa		11.16	□□□□□ -0.62
PKM-222	ENST00000568883	DUSP3	P51452	185 aa	Predicted RBP	11.16	□□□□□ -0.62
PKM-222	ENST00000568883	NAAA	Q02083	359 aa		11.16	□□□□□ -0.62
PKM-222	ENST00000568883	ATXN7L3	Q14CW9	347 aa	Predicted RBP	11.16	□□□□□ -0.62
PKM-222	ENST00000568883	HLA-B	Q31612	363 aa		11.16	□□□□□ -0.62
PKM-222	ENST00000568883	RAET1L	Q5VY80	246 aa		11.16	□□□□□ -0.62
PKM-222	ENST00000568883	LCN10	Q6JVE6	187 aa		11.16	□□□□□ -0.62
PKM-222	ENST00000568883	MAFA	Q8NHW3	353 aa	Predicted RBP	11.16	□□□□□ -0.62
PKM-222	ENST00000568883	STOML3	Q8TAV4	291 aa		11.16	□□□□□ -0.62
PKM-222	ENST00000568883	ARHGAP5-AS1	Q96IT6	56 aa		11.16	□□□□□ -0.62
PKM-222	ENST00000568883	C1QTNF6	Q9BXI9	259 aa		11.16	□□□□□ -0.62
PKM-222	ENST00000568883	CHST5	Q9GZS9	411 aa		11.16	□□□□□ -0.62
PKM-222	ENST00000568883	BANF2	Q9H503	90 aa		11.16	□□□□□ -0.62
PKM-222	ENST00000568883	MEMO1	Q9Y316	297 aa		11.16	□□□□□ -0.62
PKM-222	ENST00000568883	DHRS7C	A6NNS2	312 aa		11.15	□□□□□ -0.62
PKM-222	ENST00000568883	NUDT19	A8MXV4	375 aa		11.15	□□□□□ -0.62
PKM-222	ENST00000568883	DHH	O43323	396 aa		11.15	□□□□□ -0.62
PKM-222	ENST00000568883	RAMP1	O60894	148 aa		11.15	□□□□□ -0.62
PKM-222	ENST00000568883	NAT2	P11245	290 aa		11.15	□□□□□ -0.62
PKM-222	ENST00000568883	LIF	P15018	202 aa		11.15	□□□□□ -0.62
PKM-222	ENST00000568883	PRKACB	P22694	351 aa		11.15	□□□□□ -0.62
PKM-222	ENST00000568883	HOXD11	P31277	338 aa	Predicted RBP	11.15	□□□□□ -0.62
PKM-222	ENST00000568883	HIST1H3A	P68431	136 aa		11.15	□□□□□ -0.62
PKM-222	ENST00000568883	HIST2H3PS2	Q5TEC6	136 aa		11.15	□□□□□ -0.62
PKM-222	ENST00000568883		Q6ZSR3	168 aa		11.15	□□□□□ -0.62
PKM-222	ENST00000568883	HIST2H3A	Q71DI3	136 aa		11.15	□□□□□ -0.62
PKM-222	ENST00000568883	PEG10	Q86TG7	708 aa	Known RBP	11.15	□□□□□ -0.62
PKM-222	ENST00000568883	MAML2	Q8IZL2	1156 aa	Predicted RBP	11.15	□□□□□ -0.62
PKM-222	ENST00000568883	RELL2	Q8NC24	303 aa	Predicted RBP	11.15	□□□□□ -0.62
PKM-222	ENST00000568883	AGBL5	Q8NDL9	886 aa		11.15	□□□□□ -0.62
PKM-222	ENST00000568883	OR52H1	Q8NGJ2	320 aa		11.15	□□□□□ -0.62
PKM-222	ENST00000568883	IFI44	Q8TCB0	444 aa		11.15	□□□□□ -0.62
PKM-222	ENST00000568883	PAQR8	Q8TEZ7	354 aa		11.15	□□□□□ -0.62
PKM-222	ENST00000568883	DCUN1D4	Q92564	292 aa		11.15	□□□□□ -0.62
PKM-222	ENST00000568883	PIGQ	Q9BRB3	760 aa		11.15	□□□□□ -0.62
PKM-222	ENST00000568883	SF3B5	Q9BWJ5	86 aa	Known RBP	11.15	□□□□□ -0.62
PKM-222	ENST00000568883	ZC4H2	Q9NQZ6	224 aa		11.15	□□□□□ -0.62
PKM-222	ENST00000568883	OCIAD1	Q9NX40	245 aa		11.15	□□□□□ -0.62
PKM-222	ENST00000568883	ZNF319	Q9P2F9	582 aa		11.15	□□□□□ -0.62
PKM-222	ENST00000568883	GPR160	Q9UJ42	338 aa		11.15	□□□□□ -0.62
PKM-222	ENST00000568883	FLVCR1	Q9Y5Y0	555 aa		11.15	□□□□□ -0.62
PKM-222	ENST00000568883	KIF26B	Q2KJY2	2108 aa		11.15	□□□□□ -0.63
PKM-222	ENST00000568883	IGKV1-9	A0A0C4DH69	117 aa		11.15	□□□□□ -0.63
PKM-222	ENST00000568883	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	11.15	□□□□□ -0.63
PKM-222	ENST00000568883	FIGNL2	A6NMB9	653 aa		11.15	□□□□□ -0.63
PKM-222	ENST00000568883		F5H5K5	113 aa		11.15	□□□□□ -0.63
PKM-222	ENST00000568883	SUCLG1	P53597	346 aa	Known RBP	11.15	□□□□□ -0.63
PKM-222	ENST00000568883	TMEM50B	P56557	158 aa		11.15	□□□□□ -0.63
PKM-222	ENST00000568883	EIF5A	P63241	154 aa	Known RBP	11.15	□□□□□ -0.63
PKM-222	ENST00000568883	BTN1A1	Q13410	526 aa		11.15	□□□□□ -0.63
PKM-222	ENST00000568883	CCDC157	Q569K6	752 aa		11.15	□□□□□ -0.63
PKM-222	ENST00000568883	PMS2CL	Q68D20	193 aa		11.15	□□□□□ -0.63
PKM-222	ENST00000568883	TFAP2E	Q6VUC0	442 aa		11.15	□□□□□ -0.63
PKM-222	ENST00000568883	SLC16A14	Q7RTX9	510 aa		11.15	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms