RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 SLC29A1Q99808 456 aa13.71□□□□□ -0.21
TSR3-202ENST00000566296 TSSK6Q9BXA6 273 aa13.71□□□□□ -0.21
TSR3-202ENST00000566296 VCXQ9H320 206 aa13.71□□□□□ -0.21
TSR3-202ENST00000566296 VCX3BQ9H321 246 aa13.71□□□□□ -0.21
TSR3-202ENST00000566296 FN3KQ9H479 309 aa13.71□□□□□ -0.21
TSR3-202ENST00000566296 PNRC2Q9NPJ4 139 aaKnown RBP13.71□□□□□ -0.21
TSR3-202ENST00000566296 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.7□□□□□ -0.22
TSR3-202ENST00000566296 OOEPA6NGQ2 149 aa13.7□□□□□ -0.22
TSR3-202ENST00000566296 A6NLC8 198 aa13.7□□□□□ -0.22
TSR3-202ENST00000566296 IDH3BO43837 385 aa13.7□□□□□ -0.22
TSR3-202ENST00000566296 GMDSO60547 372 aa13.7□□□□□ -0.22
TSR3-202ENST00000566296 MMP9P14780 707 aa13.7□□□□□ -0.22
TSR3-202ENST00000566296 CRISP1P54107 249 aa13.7□□□□□ -0.22
TSR3-202ENST00000566296 SRSF4Q08170 494 aaKnown RBP13.7□□□□□ -0.22
TSR3-202ENST00000566296 MZT1Q08AG7 82 aa13.7□□□□□ -0.22
TSR3-202ENST00000566296 NAA40Q86UY6 237 aa13.7□□□□□ -0.22
TSR3-202ENST00000566296 SPERTQ8NA61 448 aa13.7□□□□□ -0.22
TSR3-202ENST00000566296 SCCPDHQ8NBX0 429 aa13.7□□□□□ -0.22
TSR3-202ENST00000566296 TBC1D15Q8TC07 691 aa13.7□□□□□ -0.22
TSR3-202ENST00000566296 RDH12Q96NR8 316 aa13.7□□□□□ -0.22
TSR3-202ENST00000566296 WDFY2Q96P53 400 aa13.7□□□□□ -0.22
TSR3-202ENST00000566296 GABARAPL3Q9BY60 117 aa13.7□□□□□ -0.22
TSR3-202ENST00000566296 MMP27Q9H306 513 aa13.7□□□□□ -0.22
TSR3-202ENST00000566296 ACOXLQ9NUZ1 547 aa13.7□□□□□ -0.22
TSR3-202ENST00000566296 MRPL15Q9P015 296 aaKnown RBP13.7□□□□□ -0.22
TSR3-202ENST00000566296 NOTCH1P46531 2555 aa13.69□□□□□ -0.22
TSR3-202ENST00000566296 CENPVL3A0A0U1RRI6 287 aa13.69□□□□□ -0.22
TSR3-202ENST00000566296 hCG_1807616A0A1W2PRN6 198 aa13.69□□□□□ -0.22
TSR3-202ENST00000566296 BHLHE40O14503 412 aa13.69□□□□□ -0.22
TSR3-202ENST00000566296 MITFO75030 526 aaPredicted RBP13.69□□□□□ -0.22
TSR3-202ENST00000566296 PTBP3O95758 552 aaKnown RBP13.69□□□□□ -0.22
TSR3-202ENST00000566296 POU1F1P28069 291 aa13.69□□□□□ -0.22
TSR3-202ENST00000566296 HOXA4Q00056 320 aaPredicted RBP13.69□□□□□ -0.22
TSR3-202ENST00000566296 RELBQ01201 579 aa13.69□□□□□ -0.22
TSR3-202ENST00000566296 SNAI3Q3KNW1 292 aa13.69□□□□□ -0.22
TSR3-202ENST00000566296 LNX2Q8N448 690 aa13.69□□□□□ -0.22
TSR3-202ENST00000566296 PROKR2Q8NFJ6 384 aa13.69□□□□□ -0.22
TSR3-202ENST00000566296 OR8D4Q8NGM9 314 aa13.69□□□□□ -0.22
TSR3-202ENST00000566296 OR2AE1Q8NHA4 323 aa13.69□□□□□ -0.22
TSR3-202ENST00000566296 DYRK2Q92630 601 aa13.69□□□□□ -0.22
TSR3-202ENST00000566296 UBE2FQ969M7 185 aa13.69□□□□□ -0.22
TSR3-202ENST00000566296 MAP6Q96JE9 813 aa13.69□□□□□ -0.22
TSR3-202ENST00000566296 CITED1Q99966 193 aa13.69□□□□□ -0.22
TSR3-202ENST00000566296 TEX12Q9BXU0 123 aa13.69□□□□□ -0.22
TSR3-202ENST00000566296 C1orf123Q9NWV4 160 aa13.69□□□□□ -0.22
TSR3-202ENST00000566296 PRKDCP78527 4128 aaKnown RBP13.68□□□□□ -0.22
TSR3-202ENST00000566296 IGHV1-69DA0A0B4J2H0 117 aa13.68□□□□□ -0.22
TSR3-202ENST00000566296 OR6C68A6NDL8 312 aa13.68□□□□□ -0.22
TSR3-202ENST00000566296 IGHV1-69P01742 117 aa13.68□□□□□ -0.22
TSR3-202ENST00000566296 GYPAP02724 150 aa13.68□□□□□ -0.22
TSR3-202ENST00000566296 ZNF92Q03936 586 aa13.68□□□□□ -0.22
TSR3-202ENST00000566296 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.68□□□□□ -0.22
TSR3-202ENST00000566296 DBPQ10586 325 aaPredicted RBP13.68□□□□□ -0.22
TSR3-202ENST00000566296 GINS1Q14691 196 aa13.68□□□□□ -0.22
TSR3-202ENST00000566296 GLYATL3Q5SZD4 288 aa13.68□□□□□ -0.22
TSR3-202ENST00000566296 DRAM2Q6UX65 266 aa13.68□□□□□ -0.22
TSR3-202ENST00000566296 GALNT4Q8N4A0 578 aa13.68□□□□□ -0.22
TSR3-202ENST00000566296 OR56B2PQ8NGI1 322 aa13.68□□□□□ -0.22
TSR3-202ENST00000566296 LHX4Q969G2 390 aa13.68□□□□□ -0.22
TSR3-202ENST00000566296 COPS4Q9BT78 406 aa13.68□□□□□ -0.22
TSR3-202ENST00000566296 SIRPDQ9H106 197 aa13.68□□□□□ -0.22
TSR3-202ENST00000566296 RASSF4Q9H2L5 321 aa13.68□□□□□ -0.22
TSR3-202ENST00000566296 RIBC2Q9H4K1 309 aa13.68□□□□□ -0.22
TSR3-202ENST00000566296 OPA3Q9H6K4 179 aa13.68□□□□□ -0.22
TSR3-202ENST00000566296 SLC25A19Q9HC21 320 aa13.68□□□□□ -0.22
TSR3-202ENST00000566296 SMURF1Q9HCE7 757 aa13.68□□□□□ -0.22
TSR3-202ENST00000566296 C14orf119Q9NWQ9 140 aa13.68□□□□□ -0.22
TSR3-202ENST00000566296 MRPL22Q9NWU5 206 aaKnown RBP13.68□□□□□ -0.22
TSR3-202ENST00000566296 SMPD3Q9NY59 655 aaPredicted RBP13.68□□□□□ -0.22
TSR3-202ENST00000566296 RNF114Q9Y508 228 aa13.68□□□□□ -0.22
TSR3-202ENST00000566296 TGP01266 2768 aa13.67□□□□□ -0.22
TSR3-202ENST00000566296 ECDO95905 644 aaPredicted RBP13.67□□□□□ -0.22
TSR3-202ENST00000566296 GRPP07492 148 aa13.67□□□□□ -0.22
TSR3-202ENST00000566296 PYCR1P32322 319 aa13.67□□□□□ -0.22
TSR3-202ENST00000566296 GRK5P34947 590 aa13.67□□□□□ -0.22
TSR3-202ENST00000566296 CDK5Q00535 292 aa13.67□□□□□ -0.22
TSR3-202ENST00000566296 PTGES3Q15185 160 aaKnown RBP13.67□□□□□ -0.22
TSR3-202ENST00000566296 TAF13Q15543 124 aa13.67□□□□□ -0.22
TSR3-202ENST00000566296 C11orf91Q3C1V1 193 aa13.67□□□□□ -0.22
TSR3-202ENST00000566296 SLC35F1Q5T1Q4 408 aa13.67□□□□□ -0.22
TSR3-202ENST00000566296 OR2T4Q8NH00 348 aa13.67□□□□□ -0.22
TSR3-202ENST00000566296 NRG4Q8WWG1 115 aa13.67□□□□□ -0.22
TSR3-202ENST00000566296 PRRG3Q9BZD7 231 aa13.67□□□□□ -0.22
TSR3-202ENST00000566296 A0A0G2JK05 382 aa13.66□□□□□ -0.22
TSR3-202ENST00000566296 ZAR1LA6NP61 321 aa13.66□□□□□ -0.22
TSR3-202ENST00000566296 H0YJX3 145 aa13.66□□□□□ -0.22
TSR3-202ENST00000566296 DVL1O14640 695 aa13.66□□□□□ -0.22
TSR3-202ENST00000566296 GPR137BO60478 399 aa13.66□□□□□ -0.22
TSR3-202ENST00000566296 IFNGP01579 166 aa13.66□□□□□ -0.22
TSR3-202ENST00000566296 HMGN1P05114 100 aa13.66□□□□□ -0.22
TSR3-202ENST00000566296 ARF6P62330 175 aa13.66□□□□□ -0.22
TSR3-202ENST00000566296 GDPGP1Q6ZNW5 385 aa13.66□□□□□ -0.22
TSR3-202ENST00000566296 ZNF826PQ6ZT77 177 aa13.66□□□□□ -0.22
TSR3-202ENST00000566296 BTN2A1Q7KYR7 527 aa13.66□□□□□ -0.22
TSR3-202ENST00000566296 LDLRAD3Q86YD5 345 aa13.66□□□□□ -0.22
TSR3-202ENST00000566296 GCSAMQ8N6F7 178 aa13.66□□□□□ -0.22
TSR3-202ENST00000566296 OR4Q3Q8NH05 313 aa13.66□□□□□ -0.22
TSR3-202ENST00000566296 OR8S1Q8NH09 359 aa13.66□□□□□ -0.22
TSR3-202ENST00000566296 ST8SIA4Q92187 359 aa13.66□□□□□ -0.22
TSR3-202ENST00000566296 TOR3AQ9H497 397 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms