RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 FKBP14Q9NWM8 211 aa13.27□□□□□ -0.29
USB1-208ENST00000563207 GNG8Q9UK08 70 aa13.27□□□□□ -0.29
USB1-208ENST00000563207 OR52A1Q9UKL2 312 aa13.27□□□□□ -0.29
USB1-208ENST00000563207 CAB39Q9Y376 341 aaPredicted RBP13.27□□□□□ -0.29
USB1-208ENST00000563207 NOP16Q9Y3C1 178 aaKnown RBP13.27□□□□□ -0.29
USB1-208ENST00000563207 TPRKBQ9Y3C4 175 aa13.27□□□□□ -0.29
USB1-208ENST00000563207 N6AMT1Q9Y5N5 214 aa13.27□□□□□ -0.29
USB1-208ENST00000563207 MAGEB4O15481 346 aaPredicted RBP13.26□□□□□ -0.29
USB1-208ENST00000563207 PPIHO43447 177 aaKnown RBP13.26□□□□□ -0.29
USB1-208ENST00000563207 XPNPEP2O43895 674 aa13.26□□□□□ -0.29
USB1-208ENST00000563207 LIMS3P0CW19 117 aa13.26□□□□□ -0.29
USB1-208ENST00000563207 LIMS4P0CW20 117 aa13.26□□□□□ -0.29
USB1-208ENST00000563207 ZNF81P51508 661 aa13.26□□□□□ -0.29
USB1-208ENST00000563207 SPRNQ5BIV9 151 aa13.26□□□□□ -0.29
USB1-208ENST00000563207 OR2T2Q6IF00 324 aa13.26□□□□□ -0.29
USB1-208ENST00000563207 FDX2Q6P4F2 183 aa13.26□□□□□ -0.29
USB1-208ENST00000563207 TMPRSS11AQ6ZMR5 421 aa13.26□□□□□ -0.29
USB1-208ENST00000563207 ELMOD2Q8IZ81 293 aa13.26□□□□□ -0.29
USB1-208ENST00000563207 STX19Q8N4C7 294 aa13.26□□□□□ -0.29
USB1-208ENST00000563207 FTMTQ8N4E7 242 aa13.26□□□□□ -0.29
USB1-208ENST00000563207 CCDC54Q8NEL0 328 aa13.26□□□□□ -0.29
USB1-208ENST00000563207 OR8B12Q8NGG6 310 aa13.26□□□□□ -0.29
USB1-208ENST00000563207 OR13G1Q8NGZ3 307 aa13.26□□□□□ -0.29
USB1-208ENST00000563207 OR2AE1Q8NHA4 323 aa13.26□□□□□ -0.29
USB1-208ENST00000563207 RORBQ92753 470 aa13.26□□□□□ -0.29
USB1-208ENST00000563207 MYDGFQ969H8 173 aa13.26□□□□□ -0.29
USB1-208ENST00000563207 CNBD2Q96M20 576 aa13.26□□□□□ -0.29
USB1-208ENST00000563207 SIGLEC11Q96RL6 698 aa13.26□□□□□ -0.29
USB1-208ENST00000563207 ZNF319Q9P2F9 582 aa13.26□□□□□ -0.29
USB1-208ENST00000563207 A0A1B0GWJ7 208 aa13.25□□□□□ -0.29
USB1-208ENST00000563207 GGT3PA6NGU5 568 aa13.25□□□□□ -0.29
USB1-208ENST00000563207 CD300LBA8K4G0 201 aa13.25□□□□□ -0.29
USB1-208ENST00000563207 J3QLW9 94 aa13.25□□□□□ -0.29
USB1-208ENST00000563207 RPP14O95059 124 aaKnown RBP13.25□□□□□ -0.29
USB1-208ENST00000563207 PNPP00491 289 aa13.25□□□□□ -0.29
USB1-208ENST00000563207 ZNF19P17023 458 aa13.25□□□□□ -0.29
USB1-208ENST00000563207 ACHEP22303 614 aa13.25□□□□□ -0.29
USB1-208ENST00000563207 THBS2P35442 1172 aa13.25□□□□□ -0.29
USB1-208ENST00000563207 CCR9P51686 369 aa13.25□□□□□ -0.29
USB1-208ENST00000563207 OR12D2P58182 307 aa13.25□□□□□ -0.29
USB1-208ENST00000563207 LMO4P61968 165 aa13.25□□□□□ -0.29
USB1-208ENST00000563207 FAM3AP98173 230 aa13.25□□□□□ -0.29
USB1-208ENST00000563207 TP53I3Q53FA7 332 aa13.25□□□□□ -0.29
USB1-208ENST00000563207 RBM48Q5RL73 367 aaKnown RBP13.25□□□□□ -0.29
USB1-208ENST00000563207 BCL2L15Q5TBC7 163 aa13.25□□□□□ -0.29
USB1-208ENST00000563207 RNLSQ5VYX0 342 aa13.25□□□□□ -0.29
USB1-208ENST00000563207 CATSPERDQ86XM0 798 aa13.25□□□□□ -0.29
USB1-208ENST00000563207 KLHL36Q8N4N3 616 aa13.25□□□□□ -0.29
USB1-208ENST00000563207 CSNK2A3Q8NEV1 391 aa13.25□□□□□ -0.29
USB1-208ENST00000563207 SPRYD4Q8WW59 207 aaPredicted RBP13.25□□□□□ -0.29
USB1-208ENST00000563207 C4orf36Q96KX1 117 aa13.25□□□□□ -0.29
USB1-208ENST00000563207 SLC30A2Q9BRI3 323 aa13.25□□□□□ -0.29
USB1-208ENST00000563207 G6PC2Q9NQR9 355 aa13.25□□□□□ -0.29
USB1-208ENST00000563207 ACOXLQ9NUZ1 547 aa13.25□□□□□ -0.29
USB1-208ENST00000563207 MRPL15Q9P015 296 aaKnown RBP13.25□□□□□ -0.29
USB1-208ENST00000563207 BLOC1S6Q9UL45 172 aa13.25□□□□□ -0.29
USB1-208ENST00000563207 hCG_38984A0A1B0GV85 526 aa13.24□□□□□ -0.29
USB1-208ENST00000563207 MTRF1O75570 445 aaKnown RBP13.24□□□□□ -0.29
USB1-208ENST00000563207 IGLV3-1P01715 115 aa13.24□□□□□ -0.29
USB1-208ENST00000563207 CD55P08174 381 aa13.24□□□□□ -0.29
USB1-208ENST00000563207 HTR1AP08908 422 aa13.24□□□□□ -0.29
USB1-208ENST00000563207 HNF1AP20823 631 aa13.24□□□□□ -0.29
USB1-208ENST00000563207 TNFSF4P23510 183 aa13.24□□□□□ -0.29
USB1-208ENST00000563207 GSK3AP49840 483 aa13.24□□□□□ -0.29
USB1-208ENST00000563207 GBX2P52951 348 aaPredicted RBP13.24□□□□□ -0.29
USB1-208ENST00000563207 DVL1P1P54792 670 aaPredicted RBP13.24□□□□□ -0.29
USB1-208ENST00000563207 MVKQ03426 396 aa13.24□□□□□ -0.29
USB1-208ENST00000563207 OR8B8Q15620 311 aa13.24□□□□□ -0.29
USB1-208ENST00000563207 TSTQ16762 297 aaKnown RBP13.24□□□□□ -0.29
USB1-208ENST00000563207 AHSA2Q719I0 299 aa13.24□□□□□ -0.29
USB1-208ENST00000563207 KLBQ86Z14 1044 aa13.24□□□□□ -0.29
USB1-208ENST00000563207 OR52N1Q8NH53 320 aa13.24□□□□□ -0.29
USB1-208ENST00000563207 PELI1Q96FA3 418 aa13.24□□□□□ -0.29
USB1-208ENST00000563207 YTHDF1Q9BYJ9 559 aaKnown RBP13.24□□□□□ -0.29
USB1-208ENST00000563207 TMEM100Q9NV29 134 aa13.24□□□□□ -0.29
USB1-208ENST00000563207 GTF2A1LQ9UNN4 478 aa13.24□□□□□ -0.29
USB1-208ENST00000563207 C5orf63A6NC05 138 aa13.23□□□□□ -0.29
USB1-208ENST00000563207 DHRS7CA6NNS2 312 aa13.23□□□□□ -0.29
USB1-208ENST00000563207 GMDSO60547 372 aa13.23□□□□□ -0.29
USB1-208ENST00000563207 RGS9O75916 674 aaPredicted RBP13.23□□□□□ -0.29
USB1-208ENST00000563207 AVPP01185 164 aa13.23□□□□□ -0.29
USB1-208ENST00000563207 TTRP02766 147 aa13.23□□□□□ -0.29
USB1-208ENST00000563207 CDK1P06493 297 aa13.23□□□□□ -0.29
USB1-208ENST00000563207 UBCP0CG48 685 aaKnown RBP13.23□□□□□ -0.29
USB1-208ENST00000563207 SRP14P37108 136 aaKnown RBP13.23□□□□□ -0.29
USB1-208ENST00000563207 MAP2K3P46734 347 aa13.23□□□□□ -0.29
USB1-208ENST00000563207 TGM4P49221 684 aa13.23□□□□□ -0.29
USB1-208ENST00000563207 ETV1P50549 477 aa13.23□□□□□ -0.29
USB1-208ENST00000563207 SLC35A2P78381 396 aa13.23□□□□□ -0.29
USB1-208ENST00000563207 MRPS11P82912 194 aaKnown RBP13.23□□□□□ -0.29
USB1-208ENST00000563207 MFGE8Q08431 387 aaPredicted RBP13.23□□□□□ -0.29
USB1-208ENST00000563207 CCDC58Q4VC31 144 aa13.23□□□□□ -0.29
USB1-208ENST00000563207 ZBTB37Q5TC79 503 aa13.23□□□□□ -0.29
USB1-208ENST00000563207 C1orf229Q6ZS94 237 aaPredicted RBP13.23□□□□□ -0.29
USB1-208ENST00000563207 Q6ZSR3 168 aa13.23□□□□□ -0.29
USB1-208ENST00000563207 KRT74Q7RTS7 529 aa13.23□□□□□ -0.29
USB1-208ENST00000563207 SPERTQ8NA61 448 aa13.23□□□□□ -0.29
USB1-208ENST00000563207 OR2G2Q8NGZ5 317 aa13.23□□□□□ -0.29
USB1-208ENST00000563207 EGLN1Q9GZT9 426 aa13.23□□□□□ -0.29
USB1-208ENST00000563207 DUSP21Q9H596 190 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms