RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 NKAPLQ5M9Q1 402 aa11.54□□□□□ -0.56
USB1-207ENST00000563149 FAM69BQ5VUD6 431 aa11.54□□□□□ -0.56
USB1-207ENST00000563149 Q6ZSR3 168 aa11.54□□□□□ -0.56
USB1-207ENST00000563149 IQCF2Q8IXL9 164 aa11.54□□□□□ -0.56
USB1-207ENST00000563149 ZSCAN4Q8NAM6 433 aaPredicted RBP11.54□□□□□ -0.56
USB1-207ENST00000563149 EMG1Q92979 244 aaKnown RBP11.54□□□□□ -0.56
USB1-207ENST00000563149 C10orf35Q96D05 121 aa11.54□□□□□ -0.56
USB1-207ENST00000563149 SAT2Q96F10 170 aaPredicted RBP11.54□□□□□ -0.56
USB1-207ENST00000563149 ARHGAP5-AS1Q96IT6 56 aa11.54□□□□□ -0.56
USB1-207ENST00000563149 FAM71F1Q96KD3 344 aaPredicted RBP11.54□□□□□ -0.56
USB1-207ENST00000563149 NECAB3Q96P71 396 aaPredicted RBP11.54□□□□□ -0.56
USB1-207ENST00000563149 OR5B2Q96R09 309 aa11.54□□□□□ -0.56
USB1-207ENST00000563149 RTBDNQ9BSG5 229 aaPredicted RBP11.54□□□□□ -0.56
USB1-207ENST00000563149 BANF2Q9H503 90 aa11.54□□□□□ -0.56
USB1-207ENST00000563149 SLC39A1Q9NY26 324 aa11.54□□□□□ -0.56
USB1-207ENST00000563149 ZNF319Q9P2F9 582 aa11.54□□□□□ -0.56
USB1-207ENST00000563149 ZNF629Q9UEG4 869 aaPredicted RBP11.54□□□□□ -0.56
USB1-207ENST00000563149 C19orf25Q9UFG5 118 aaPredicted RBP11.54□□□□□ -0.56
USB1-207ENST00000563149 CARHSP1Q9Y2V2 147 aaKnown RBP11.54□□□□□ -0.56
USB1-207ENST00000563149 RP1P56715 2156 aa11.54□□□□□ -0.56
USB1-207ENST00000563149 FER1L5A0AVI2 2057 aa11.54□□□□□ -0.56
USB1-207ENST00000563149 A0A0U1RQV5 110 aa11.54□□□□□ -0.56
USB1-207ENST00000563149 FOXI3A8MTJ6 420 aaPredicted RBP11.54□□□□□ -0.56
USB1-207ENST00000563149 SERPINE3A8MV23 424 aa11.54□□□□□ -0.56
USB1-207ENST00000563149 H0YIZ8 118 aa11.54□□□□□ -0.56
USB1-207ENST00000563149 RAD51DO75771 328 aa11.54□□□□□ -0.56
USB1-207ENST00000563149 PLATP00750 562 aa11.54□□□□□ -0.56
USB1-207ENST00000563149 NAT2P11245 290 aa11.54□□□□□ -0.56
USB1-207ENST00000563149 CDAP32320 146 aa11.54□□□□□ -0.56
USB1-207ENST00000563149 NPY4RP50391 375 aa11.54□□□□□ -0.56
USB1-207ENST00000563149 SLC35A1P78382 337 aa11.54□□□□□ -0.56
USB1-207ENST00000563149 MFAP5Q13361 173 aa11.54□□□□□ -0.56
USB1-207ENST00000563149 FAM57BQ71RH2 274 aa11.54□□□□□ -0.56
USB1-207ENST00000563149 RNF144BQ7Z419 303 aa11.54□□□□□ -0.56
USB1-207ENST00000563149 FADS6Q8N9I5 356 aa11.54□□□□□ -0.56
USB1-207ENST00000563149 OR51T1Q8NGJ9 327 aa11.54□□□□□ -0.56
USB1-207ENST00000563149 OR10Z1Q8NGY1 313 aa11.54□□□□□ -0.56
USB1-207ENST00000563149 CNTNAP3BQ96NU0 1288 aa11.54□□□□□ -0.56
USB1-207ENST00000563149 SPACA5Q96QH8 159 aa11.54□□□□□ -0.56
USB1-207ENST00000563149 TM2D1Q9BX74 207 aa11.54□□□□□ -0.56
USB1-207ENST00000563149 SLC26A1Q9H2B4 701 aa11.54□□□□□ -0.56
USB1-207ENST00000563149 ATXN7L1Q9ULK2 861 aaPredicted RBP11.54□□□□□ -0.56
USB1-207ENST00000563149 MEMO1Q9Y316 297 aa11.54□□□□□ -0.56
USB1-207ENST00000563149 MTCH2Q9Y6C9 303 aa11.54□□□□□ -0.56
USB1-207ENST00000563149 FAM74A7A6NL05 159 aa11.53□□□□□ -0.56
USB1-207ENST00000563149 RER1O15258 196 aa11.53□□□□□ -0.56
USB1-207ENST00000563149 GUCA1AP43080 201 aaPredicted RBP11.53□□□□□ -0.56
USB1-207ENST00000563149 PTGFRP43088 359 aa11.53□□□□□ -0.56
USB1-207ENST00000563149 AFF3P51826 1226 aaKnown RBP11.53□□□□□ -0.56
USB1-207ENST00000563149 ZNF133P52736 654 aaPredicted RBP11.53□□□□□ -0.56
USB1-207ENST00000563149 SUPT4H1P63272 117 aaKnown RBP11.53□□□□□ -0.56
USB1-207ENST00000563149 SCRN3Q0VDG4 424 aa11.53□□□□□ -0.56
USB1-207ENST00000563149 IL15RAQ13261 267 aa11.53□□□□□ -0.56
USB1-207ENST00000563149 FAM74A3Q4VXF1 159 aa11.53□□□□□ -0.56
USB1-207ENST00000563149 EIF5AL1Q6IS14 154 aaKnown RBP11.53□□□□□ -0.56
USB1-207ENST00000563149 OR10G3Q8NGC4 313 aa11.53□□□□□ -0.56
USB1-207ENST00000563149 OR13G1Q8NGZ3 307 aa11.53□□□□□ -0.56
USB1-207ENST00000563149 PAQR8Q8TEZ7 354 aa11.53□□□□□ -0.56
USB1-207ENST00000563149 PP6455Q8WZ26 134 aa11.53□□□□□ -0.56
USB1-207ENST00000563149 RRNAD1Q96FB5 475 aaKnown RBP11.53□□□□□ -0.56
USB1-207ENST00000563149 PGAM5Q96HS1 289 aa11.53□□□□□ -0.56
USB1-207ENST00000563149 PHF7Q9BWX1 381 aaPredicted RBP11.53□□□□□ -0.56
USB1-207ENST00000563149 PRELID3BQ9Y3B1 194 aa11.53□□□□□ -0.56
USB1-207ENST00000563149 V9GYS6 101 aa11.53□□□□□ -0.56
USB1-207ENST00000563149 CDH23Q9H251 3354 aa11.52□□□□□ -0.56
USB1-207ENST00000563149 A0A087WZY1 265 aa11.52□□□□□ -0.57
USB1-207ENST00000563149 IGKV1-9A0A0C4DH69 117 aa11.52□□□□□ -0.57
USB1-207ENST00000563149 A0A1W2PNR3 127 aa11.52□□□□□ -0.57
USB1-207ENST00000563149 BCAT2O15382 392 aaPredicted RBP11.52□□□□□ -0.57
USB1-207ENST00000563149 SCRG1O75711 98 aa11.52□□□□□ -0.57
USB1-207ENST00000563149 DKK1O94907 266 aa11.52□□□□□ -0.57
USB1-207ENST00000563149 APOC1P02654 83 aa11.52□□□□□ -0.57
USB1-207ENST00000563149 CSTBP04080 98 aaKnown RBP11.52□□□□□ -0.57
USB1-207ENST00000563149 FAM157CP0CG43 387 aa11.52□□□□□ -0.57
USB1-207ENST00000563149 SLC2A1P11166 492 aa11.52□□□□□ -0.57
USB1-207ENST00000563149 ICAM2P13598 275 aa11.52□□□□□ -0.57
USB1-207ENST00000563149 DHPSP49366 369 aaPredicted RBP11.52□□□□□ -0.57
USB1-207ENST00000563149 FOXL2P58012 376 aa11.52□□□□□ -0.57
USB1-207ENST00000563149 CSNK2A1P68400 391 aaPredicted RBP11.52□□□□□ -0.57
USB1-207ENST00000563149 SLC9A3R2Q15599 337 aa11.52□□□□□ -0.57
USB1-207ENST00000563149 KISS1Q15726 138 aa11.52□□□□□ -0.57
USB1-207ENST00000563149 C10orf128Q5T292 105 aa11.52□□□□□ -0.57
USB1-207ENST00000563149 AADACL3Q5VUY0 350 aa11.52□□□□□ -0.57
USB1-207ENST00000563149 CARD17Q5XLA6 110 aa11.52□□□□□ -0.57
USB1-207ENST00000563149 FOXL2NBQ6ZUU3 175 aa11.52□□□□□ -0.57
USB1-207ENST00000563149 SLC16A14Q7RTX9 510 aa11.52□□□□□ -0.57
USB1-207ENST00000563149 RTN4RL2Q86UN3 420 aa11.52□□□□□ -0.57
USB1-207ENST00000563149 POC1AQ8NBT0 407 aa11.52□□□□□ -0.57
USB1-207ENST00000563149 SLC38A9Q8NBW4 561 aa11.52□□□□□ -0.57
USB1-207ENST00000563149 CSNK2A3Q8NEV1 391 aa11.52□□□□□ -0.57
USB1-207ENST00000563149 GJC3Q8NFK1 279 aa11.52□□□□□ -0.57
USB1-207ENST00000563149 SOX7Q9BT81 388 aa11.52□□□□□ -0.57
USB1-207ENST00000563149 PECRQ9BY49 303 aa11.52□□□□□ -0.57
USB1-207ENST00000563149 SEC11CQ9BY50 192 aa11.52□□□□□ -0.57
USB1-207ENST00000563149 METTL8Q9H825 291 aaKnown RBP11.52□□□□□ -0.57
USB1-207ENST00000563149 RARRES3Q9UL19 164 aa11.52□□□□□ -0.57
USB1-207ENST00000563149 CA14Q9ULX7 337 aa11.52□□□□□ -0.57
USB1-207ENST00000563149 REV3LO60673 3130 aa11.52□□□□□ -0.57
USB1-207ENST00000563149 PHF3Q92576 2039 aaKnown RBP11.52□□□□□ -0.57
USB1-207ENST00000563149 H7C2Y5 167 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms