RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 RIDAP52758 137 aaKnown RBP13.33□□□□□ -0.28
LMX1B-204ENST00000561065 ZNF829Q3KNS6 432 aaPredicted RBP13.33□□□□□ -0.28
LMX1B-204ENST00000561065 LYPD2Q6UXB3 125 aa13.33□□□□□ -0.28
LMX1B-204ENST00000561065 NLRC3Q7RTR2 1065 aa13.33□□□□□ -0.28
LMX1B-204ENST00000561065 ZNF679Q8IYX0 411 aa13.33□□□□□ -0.28
LMX1B-204ENST00000561065 BPIFB2Q8N4F0 458 aa13.33□□□□□ -0.28
LMX1B-204ENST00000561065 BBS1Q8NFJ9 593 aa13.33□□□□□ -0.28
LMX1B-204ENST00000561065 OR56B2PQ8NGI1 322 aa13.33□□□□□ -0.28
LMX1B-204ENST00000561065 IL4I1Q96RQ9 567 aa13.33□□□□□ -0.28
LMX1B-204ENST00000561065 SUCNR1Q9BXA5 334 aa13.33□□□□□ -0.28
LMX1B-204ENST00000561065 GABARAPL3Q9BY60 117 aa13.33□□□□□ -0.28
LMX1B-204ENST00000561065 BRD7Q9NPI1 651 aa13.33□□□□□ -0.28
LMX1B-204ENST00000561065 ZNF69Q9UC07 566 aa13.33□□□□□ -0.28
LMX1B-204ENST00000561065 OR5V1Q9UGF6 321 aa13.33□□□□□ -0.28
LMX1B-204ENST00000561065 IKZF2Q9UKS7 526 aa13.33□□□□□ -0.28
LMX1B-204ENST00000561065 PPIAL4AQ9Y536 164 aa13.33□□□□□ -0.28
LMX1B-204ENST00000561065 MPC1Q9Y5U8 109 aa13.33□□□□□ -0.28
LMX1B-204ENST00000561065 AUP1Q9Y679 476 aa13.33□□□□□ -0.28
LMX1B-204ENST00000561065 TMEM269A0A1B0GVZ9 245 aa13.32□□□□□ -0.28
LMX1B-204ENST00000561065 HAX1O00165 279 aa13.32□□□□□ -0.28
LMX1B-204ENST00000561065 NDUFA2O43678 99 aa13.32□□□□□ -0.28
LMX1B-204ENST00000561065 MTRF1O75570 445 aaKnown RBP13.32□□□□□ -0.28
LMX1B-204ENST00000561065 CD80P33681 288 aa13.32□□□□□ -0.28
LMX1B-204ENST00000561065 MAP2K3P46734 347 aa13.32□□□□□ -0.28
LMX1B-204ENST00000561065 ALDH3A2P51648 485 aa13.32□□□□□ -0.28
LMX1B-204ENST00000561065 PSMA6P60900 246 aaKnown RBP13.32□□□□□ -0.28
LMX1B-204ENST00000561065 EFNB1P98172 346 aa13.32□□□□□ -0.28
LMX1B-204ENST00000561065 FAM3AP98173 230 aa13.32□□□□□ -0.28
LMX1B-204ENST00000561065 IL5RAQ01344 420 aa13.32□□□□□ -0.28
LMX1B-204ENST00000561065 ROM1Q03395 351 aa13.32□□□□□ -0.28
LMX1B-204ENST00000561065 PAX8Q06710 450 aa13.32□□□□□ -0.28
LMX1B-204ENST00000561065 ARMCX4Q5H9R4 360 aa13.32□□□□□ -0.28
LMX1B-204ENST00000561065 LRRN1Q6UXK5 716 aa13.32□□□□□ -0.28
LMX1B-204ENST00000561065 BCL6BQ8N143 479 aaPredicted RBP13.32□□□□□ -0.28
LMX1B-204ENST00000561065 FAM216AQ8WUB2 273 aa13.32□□□□□ -0.28
LMX1B-204ENST00000561065 NEIL1Q96FI4 390 aaPredicted RBP13.32□□□□□ -0.28
LMX1B-204ENST00000561065 C1orf147Q96MC9 270 aaPredicted RBP13.32□□□□□ -0.28
LMX1B-204ENST00000561065 ZNF48Q96MX3 618 aaPredicted RBP13.32□□□□□ -0.28
LMX1B-204ENST00000561065 PKP2Q99959 881 aa13.32□□□□□ -0.28
LMX1B-204ENST00000561065 MICU1Q9BPX6 476 aa13.32□□□□□ -0.28
LMX1B-204ENST00000561065 USE1Q9NZ43 259 aa13.32□□□□□ -0.28
LMX1B-204ENST00000561065 RNF7Q9UBF6 113 aa13.32□□□□□ -0.28
LMX1B-204ENST00000561065 CTSZQ9UBR2 303 aa13.32□□□□□ -0.28
LMX1B-204ENST00000561065 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.32□□□□□ -0.28
LMX1B-204ENST00000561065 IGHV2-70DA0A0C4DH43 119 aa13.31□□□□□ -0.28
LMX1B-204ENST00000561065 A0A0U1RQV5 110 aa13.31□□□□□ -0.28
LMX1B-204ENST00000561065 IGHV4-38-2P0DP08 117 aa13.31□□□□□ -0.28
LMX1B-204ENST00000561065 GSK3AP49840 483 aa13.31□□□□□ -0.28
LMX1B-204ENST00000561065 GNB2P62879 340 aa13.31□□□□□ -0.28
LMX1B-204ENST00000561065 ACTG1P63261 375 aa13.31□□□□□ -0.28
LMX1B-204ENST00000561065 EGR3Q06889 387 aa13.31□□□□□ -0.28
LMX1B-204ENST00000561065 GFOD2Q3B7J2 385 aa13.31□□□□□ -0.28
LMX1B-204ENST00000561065 AADACL4Q5VUY2 407 aa13.31□□□□□ -0.28
LMX1B-204ENST00000561065 MEDAGQ5VYS4 303 aa13.31□□□□□ -0.28
LMX1B-204ENST00000561065 ZNF841Q6ZN19 808 aa13.31□□□□□ -0.28
LMX1B-204ENST00000561065 PRSS45Q7RTY3 260 aa13.31□□□□□ -0.28
LMX1B-204ENST00000561065 SIGLECL1Q8N7X8 197 aa13.31□□□□□ -0.28
LMX1B-204ENST00000561065 FAM81AQ8TBF8 368 aa13.31□□□□□ -0.28
LMX1B-204ENST00000561065 MRPL48Q96GC5 212 aaKnown RBP13.31□□□□□ -0.28
LMX1B-204ENST00000561065 S100A14Q9HCY8 104 aa13.31□□□□□ -0.28
LMX1B-204ENST00000561065 CLN6Q9NWW5 311 aa13.31□□□□□ -0.28
LMX1B-204ENST00000561065 ZNF319Q9P2F9 582 aa13.31□□□□□ -0.28
LMX1B-204ENST00000561065 NUP50Q9UKX7 468 aa13.31□□□□□ -0.28
LMX1B-204ENST00000561065 LRP12Q9Y561 859 aa13.31□□□□□ -0.28
LMX1B-204ENST00000561065 SOX21Q9Y651 276 aaPredicted RBP13.31□□□□□ -0.28
LMX1B-204ENST00000561065 IGHV3OR16-10A0A075B7F0 116 aa13.3□□□□□ -0.28
LMX1B-204ENST00000561065 C22orf46C9J442 243 aa13.3□□□□□ -0.28
LMX1B-204ENST00000561065 TRIM77I1YAP6 450 aa13.3□□□□□ -0.28
LMX1B-204ENST00000561065 MPZL2O60487 215 aa13.3□□□□□ -0.28
LMX1B-204ENST00000561065 FCN3O75636 299 aa13.3□□□□□ -0.28
LMX1B-204ENST00000561065 ALPLP05186 524 aa13.3□□□□□ -0.28
LMX1B-204ENST00000561065 KRT8P05787 483 aa13.3□□□□□ -0.28
LMX1B-204ENST00000561065 MRPL3P09001 348 aaKnown RBP13.3□□□□□ -0.28
LMX1B-204ENST00000561065 OR2T7P0C7T2 308 aa13.3□□□□□ -0.28
LMX1B-204ENST00000561065 HTR1FP30939 366 aa13.3□□□□□ -0.28
LMX1B-204ENST00000561065 PITPNBP48739 271 aa13.3□□□□□ -0.28
LMX1B-204ENST00000561065 COMPP49747 757 aaPredicted RBP13.3□□□□□ -0.28
LMX1B-204ENST00000561065 UBA52P62987 128 aaKnown RBP13.3□□□□□ -0.28
LMX1B-204ENST00000561065 ZNF322Q6U7Q0 402 aaPredicted RBP13.3□□□□□ -0.28
LMX1B-204ENST00000561065 C12orf54Q6X4T0 127 aa13.3□□□□□ -0.28
LMX1B-204ENST00000561065 DCDC5Q6ZRR9 648 aa13.3□□□□□ -0.28
LMX1B-204ENST00000561065 ZBTB49Q6ZSB9 765 aa13.3□□□□□ -0.28
LMX1B-204ENST00000561065 ZNF826PQ6ZT77 177 aa13.3□□□□□ -0.28
LMX1B-204ENST00000561065 THAP5Q7Z6K1 395 aa13.3□□□□□ -0.28
LMX1B-204ENST00000561065 WDR86Q86TI4 376 aa13.3□□□□□ -0.28
LMX1B-204ENST00000561065 SLC35F2Q8IXU6 374 aa13.3□□□□□ -0.28
LMX1B-204ENST00000561065 OR2T27Q8NH04 317 aa13.3□□□□□ -0.28
LMX1B-204ENST00000561065 EME1Q96AY2 570 aa13.3□□□□□ -0.28
LMX1B-204ENST00000561065 Q96MT0 163 aa13.3□□□□□ -0.28
LMX1B-204ENST00000561065 OR8B4Q96RC9 309 aa13.3□□□□□ -0.28
LMX1B-204ENST00000561065 MRI1Q9BV20 369 aa13.3□□□□□ -0.28
LMX1B-204ENST00000561065 PPP1R3EQ9H7J1 279 aa13.3□□□□□ -0.28
LMX1B-204ENST00000561065 MOB1AQ9H8S9 216 aa13.3□□□□□ -0.28
LMX1B-204ENST00000561065 PCDHGB1Q9Y5G3 927 aa13.3□□□□□ -0.28
LMX1B-204ENST00000561065 TRAV38-1A0A0B4J264 116 aa13.29□□□□□ -0.28
LMX1B-204ENST00000561065 hCG_38984A0A1B0GV85 526 aa13.29□□□□□ -0.28
LMX1B-204ENST00000561065 TMEM89A2RUT3 159 aa13.29□□□□□ -0.28
LMX1B-204ENST00000561065 A6NLC8 198 aa13.29□□□□□ -0.28
LMX1B-204ENST00000561065 BAG2O95816 211 aa13.29□□□□□ -0.28
LMX1B-204ENST00000561065 GRPP07492 148 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms