RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 ABCB9Q9NP78 766 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 GPR84Q9NQS5 396 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 ACOXLQ9NUZ1 547 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 FRRS1LQ9P0K9 344 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 SLC22A13Q9Y226 551 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 MPC1Q9Y5U8 109 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 NF1P21359 2839 aa8.16□□□□□ -1.1
RABGGTA-221ENST00000561055 ABCA2Q9BZC7 2435 aa8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 MALRD1Q5VYJ5 2156 aa8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 OR4C45A6NMZ5 311 aa8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 ANKRD30BLA7E2S9 258 aa8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 H0YL77 283 aa8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 FSTL3O95633 263 aa8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 CDK1P06493 297 aa8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 HTR1AP08908 422 aa8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 UBCP0CG48 685 aaKnown RBP8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 MYL12AP19105 171 aa8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 CA6P23280 308 aa8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 CRHBPP24387 322 aa8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 NR4A2P43354 598 aa8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 KIR3DL2P43630 455 aa8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 SRP9P49458 86 aaKnown RBP8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 GBX2P52951 348 aaPredicted RBP8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 NANOS3P60323 173 aaKnown RBP8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 MZT1Q08AG7 82 aa8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 RIPPLY1Q0D2K3 151 aa8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 ALKBH1Q13686 389 aaKnown RBP8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 OR8G1Q15617 311 aa8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 TSTQ16762 297 aaKnown RBP8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 SPRNQ5BIV9 151 aa8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 FAM76BQ5HYJ3 339 aa8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 RBM48Q5RL73 367 aaKnown RBP8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 TMEM244Q5VVB8 128 aa8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 TMEM42Q69YG0 159 aa8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 TMPRSS11AQ6ZMR5 421 aa8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 DOK3Q7L591 496 aa8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 SEMA6DQ8NFY4 1073 aa8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 OR14K1Q8NGZ2 314 aa8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 ITLN1Q8WWA0 313 aa8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 C10orf35Q96D05 121 aa8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 MEGF10Q96KG7 1140 aa8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 OR2V2Q96R30 315 aa8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 CDCA4Q9BXL8 241 aa8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 GCM1Q9NP62 436 aa8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 SCN3BQ9NY72 215 aa8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 TPRKBQ9Y3C4 175 aa8.15□□□□□ -1.1
RABGGTA-221ENST00000561055 IGHV4-30-2A0A087WSY4 118 aa8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 ZNF816-ZNF321PA0A0X1KG74 233 aa8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 LOC100289279A0A1B0GTE1 492 aa8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 E9PI62 339 aa8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 F5H5P2 479 aa8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 LYNX1G3V0Z9 82 aa8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 OGG1O15527 345 aa8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 HLA-DPB1P04440 258 aa8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 LYNX1P0DP58 116 aa8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 ZNF12P17014 697 aa8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 C21orf33P30042 268 aaPredicted RBP8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 PSMB10P40306 273 aa8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 SLC3A1Q07837 685 aa8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 LOXL1Q08397 574 aaPredicted RBP8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 ACSM1Q08AH1 577 aa8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 IRF3Q14653 427 aa8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 HFEQ30201 348 aa8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 GFOD2Q3B7J2 385 aa8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 OR2G6Q5TZ20 316 aa8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 RPL22L1Q6P5R6 122 aaKnown RBP8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 AHSA2Q719I0 299 aa8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 STX19Q8N4C7 294 aa8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 KLHL36Q8N4N3 616 aa8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 NANOGP1Q8N7R0 232 aa8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 Q8TCH9 128 aa8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 MYDGFQ969H8 173 aa8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 ITPKCQ96DU7 683 aa8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 COX4I2Q96KJ9 171 aa8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 PIMREGQ9BSJ6 248 aa8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 ADAT1Q9BUB4 502 aaKnown RBP8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 REG4Q9BYZ8 158 aa8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 Q9H521 79 aa8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 ZNF275Q9NSD4 429 aaPredicted RBP8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 C14orf119Q9NWQ9 140 aa8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 PAK1IP1Q9NWT1 392 aaPredicted RBP8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 CHCHD3Q9NX63 227 aaKnown RBP8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 BABAM2Q9NXR7 383 aa8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 CLEC2DQ9UHP7 191 aa8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 RHBDD3Q9Y3P4 386 aa8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 PCDHGB5Q9Y5G0 923 aa8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 SETD2Q9BYW2 2564 aaPredicted RBP8.14□□□□□ -1.11
RABGGTA-221ENST00000561055 ZANQ9Y493 2812 aa8.13□□□□□ -1.11
RABGGTA-221ENST00000561055 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.13□□□□□ -1.11
RABGGTA-221ENST00000561055 TMEM212A6NML5 194 aa8.13□□□□□ -1.11
RABGGTA-221ENST00000561055 P2RY10O00398 339 aa8.13□□□□□ -1.11
RABGGTA-221ENST00000561055 TPD52L2O43399 206 aaKnown RBP8.13□□□□□ -1.11
RABGGTA-221ENST00000561055 MRPS14O60783 128 aaKnown RBP8.13□□□□□ -1.11
RABGGTA-221ENST00000561055 CD1AP06126 327 aa8.13□□□□□ -1.11
RABGGTA-221ENST00000561055 CD99P14209 185 aa8.13□□□□□ -1.11
RABGGTA-221ENST00000561055 CFHR2P36980 270 aa8.13□□□□□ -1.11
RABGGTA-221ENST00000561055 GNALP38405 381 aa8.13□□□□□ -1.11
RABGGTA-221ENST00000561055 CDH15P55291 814 aa8.13□□□□□ -1.11
RABGGTA-221ENST00000561055 PRDX4Q13162 271 aa8.13□□□□□ -1.11
RABGGTA-221ENST00000561055 CDK5R1Q15078 307 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms