RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 PBOV1Q9GZY1 135 aa10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 C7orf69Q9H7B7 122 aa10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 ADGRL4Q9HBW9 690 aa10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 S100A14Q9HCY8 104 aa10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 G6PC2Q9NQR9 355 aa10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 MIOXQ9UGB7 285 aa10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 LRCH1Q9Y2L9 728 aa10.88□□□□□ -0.67
CTDSPL2-209ENST00000560620 SVEP1Q4LDE5 3571 aa10.87□□□□□ -0.67
CTDSPL2-209ENST00000560620 LOC110117498-PIK3R3F6TDL0 507 aa10.87□□□□□ -0.67
CTDSPL2-209ENST00000560620 J3QLI3 93 aa10.87□□□□□ -0.67
CTDSPL2-209ENST00000560620 RPP14O95059 124 aaKnown RBP10.87□□□□□ -0.67
CTDSPL2-209ENST00000560620 KRT8P05787 483 aa10.87□□□□□ -0.67
CTDSPL2-209ENST00000560620 ADRA2CP18825 462 aa10.87□□□□□ -0.67
CTDSPL2-209ENST00000560620 HTR1FP30939 366 aa10.87□□□□□ -0.67
CTDSPL2-209ENST00000560620 CD80P33681 288 aa10.87□□□□□ -0.67
CTDSPL2-209ENST00000560620 MAP2K3P46734 347 aa10.87□□□□□ -0.67
CTDSPL2-209ENST00000560620 HOXA4Q00056 320 aaPredicted RBP10.87□□□□□ -0.67
CTDSPL2-209ENST00000560620 IL5RAQ01344 420 aa10.87□□□□□ -0.67
CTDSPL2-209ENST00000560620 ROM1Q03395 351 aa10.87□□□□□ -0.67
CTDSPL2-209ENST00000560620 PRDX4Q13162 271 aa10.87□□□□□ -0.67
CTDSPL2-209ENST00000560620 KCNJ8Q15842 424 aa10.87□□□□□ -0.67
CTDSPL2-209ENST00000560620 BCL2L15Q5TBC7 163 aa10.87□□□□□ -0.67
CTDSPL2-209ENST00000560620 PLEKHG7Q6ZR37 379 aa10.87□□□□□ -0.67
CTDSPL2-209ENST00000560620 ZBTB49Q6ZSB9 765 aa10.87□□□□□ -0.67
CTDSPL2-209ENST00000560620 YIPF7Q8N8F6 280 aa10.87□□□□□ -0.67
CTDSPL2-209ENST00000560620 OR51E1Q8TCB6 317 aa10.87□□□□□ -0.67
CTDSPL2-209ENST00000560620 NEIL1Q96FI4 390 aaPredicted RBP10.87□□□□□ -0.67
CTDSPL2-209ENST00000560620 LYZL4Q96KX0 146 aa10.87□□□□□ -0.67
CTDSPL2-209ENST00000560620 TECTBQ96PL2 329 aa10.87□□□□□ -0.67
CTDSPL2-209ENST00000560620 MDFIQ99750 246 aa10.87□□□□□ -0.67
CTDSPL2-209ENST00000560620 PPP1R3EQ9H7J1 279 aa10.87□□□□□ -0.67
CTDSPL2-209ENST00000560620 FAM206AQ9NX38 181 aa10.87□□□□□ -0.67
CTDSPL2-209ENST00000560620 USE1Q9NZ43 259 aa10.87□□□□□ -0.67
CTDSPL2-209ENST00000560620 MPC1Q9Y5U8 109 aa10.87□□□□□ -0.67
CTDSPL2-209ENST00000560620 TRAV38-1A0A0B4J264 116 aa10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 ACOD1A6NK06 481 aa10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 PRR32B1ATL7 298 aa10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 MTRF1O75570 445 aaKnown RBP10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 WNT2P09544 360 aa10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 OR2T7P0C7T2 308 aa10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 ACKR3P25106 362 aa10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 DCTDP32321 178 aa10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 PITPNBP48739 271 aa10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 GMFBP60983 142 aa10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 EGR3Q06889 387 aa10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 MFGE8Q08431 387 aaPredicted RBP10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 LIPNQ5VXI9 398 aa10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 DCDC5Q6ZRR9 648 aa10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 ZDHHC23Q8IYP9 409 aa10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 PQLC1Q8N2U9 271 aa10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 SEMA6DQ8NFY4 1073 aa10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 OR1M1Q8NGA1 313 aa10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 OR2T27Q8NH04 317 aa10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 NANPQ8TBE9 248 aa10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 TRUB1Q8WWH5 349 aaKnown RBP10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 TMEM158Q8WZ71 300 aa10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 UBE2FQ969M7 185 aa10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 PPP1R14AQ96A00 147 aa10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 RNF170Q96K19 258 aa10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 HRASLS5Q96KN8 279 aa10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 MRI1Q9BV20 369 aa10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 TMPRSS13Q9BYE2 586 aa10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 ABCB9Q9NP78 766 aa10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 TRIM36Q9NQ86 728 aa10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 GPR84Q9NQS5 396 aa10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 MMP26Q9NRE1 261 aa10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 HAO2Q9NYQ3 351 aa10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 CLN8Q9UBY8 286 aa10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 GMPPBQ9Y5P6 360 aa10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 ARHGAP32A7KAX9 2087 aa10.86□□□□□ -0.67
CTDSPL2-209ENST00000560620 CUBNO60494 3623 aa10.85□□□□□ -0.67
CTDSPL2-209ENST00000560620 A0A0U1RQV5 110 aa10.85□□□□□ -0.67
CTDSPL2-209ENST00000560620 ZNF816-ZNF321PA0A0X1KG74 233 aa10.85□□□□□ -0.67
CTDSPL2-209ENST00000560620 A0A1W2PQL4 384 aaPredicted RBP10.85□□□□□ -0.67
CTDSPL2-209ENST00000560620 OOEPA6NGQ2 149 aa10.85□□□□□ -0.67
CTDSPL2-209ENST00000560620 F5H0A9 414 aaPredicted RBP10.85□□□□□ -0.67
CTDSPL2-209ENST00000560620 TRAPPC2LH3BP13 241 aa10.85□□□□□ -0.67
CTDSPL2-209ENST00000560620 LGALS8O00214 317 aa10.85□□□□□ -0.67
CTDSPL2-209ENST00000560620 CDIPTO14735 213 aa10.85□□□□□ -0.67
CTDSPL2-209ENST00000560620 TCF21O43680 179 aa10.85□□□□□ -0.67
CTDSPL2-209ENST00000560620 RGS9O75916 674 aaPredicted RBP10.85□□□□□ -0.67
CTDSPL2-209ENST00000560620 AVPP01185 164 aa10.85□□□□□ -0.67
CTDSPL2-209ENST00000560620 CSNK2BP67870 215 aa10.85□□□□□ -0.67
CTDSPL2-209ENST00000560620 SRSF2Q01130 221 aaKnown RBP10.85□□□□□ -0.67
CTDSPL2-209ENST00000560620 ZNF154Q13106 437 aa10.85□□□□□ -0.67
CTDSPL2-209ENST00000560620 ODF4Q2M2E3 257 aa10.85□□□□□ -0.67
CTDSPL2-209ENST00000560620 ARMCX4Q5H9R4 360 aa10.85□□□□□ -0.67
CTDSPL2-209ENST00000560620 LYPD2Q6UXB3 125 aa10.85□□□□□ -0.67
CTDSPL2-209ENST00000560620 BTNL3Q6UXE8 466 aa10.85□□□□□ -0.67
CTDSPL2-209ENST00000560620 SSX6Q7RTT6 188 aa10.85□□□□□ -0.67
CTDSPL2-209ENST00000560620 LRRC29Q8WV35 223 aa10.85□□□□□ -0.67
CTDSPL2-209ENST00000560620 ITPKCQ96DU7 683 aa10.85□□□□□ -0.67
CTDSPL2-209ENST00000560620 MOB1AQ9H8S9 216 aa10.85□□□□□ -0.67
CTDSPL2-209ENST00000560620 NUFIP1Q9UHK0 495 aaKnown RBP10.85□□□□□ -0.67
CTDSPL2-209ENST00000560620 OR52A1Q9UKL2 312 aa10.85□□□□□ -0.67
CTDSPL2-209ENST00000560620 PIGLQ9Y2B2 252 aa10.85□□□□□ -0.67
CTDSPL2-209ENST00000560620 AUP1Q9Y679 476 aa10.85□□□□□ -0.67
CTDSPL2-209ENST00000560620 R4GMQ9 66 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms