RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 ADAM29Q9UKF5 820 aa3.33□□□□□ -1.88
ATXN3-248ENST00000558190 ROS1P08922 2347 aa3.33□□□□□ -1.88
ATXN3-248ENST00000558190 SLC35D3Q5M8T2 416 aa3.33□□□□□ -1.88
ATXN3-248ENST00000558190 MED25Q71SY5 747 aa3.33□□□□□ -1.88
ATXN3-248ENST00000558190 EIF4E3Q8N5X7 224 aaKnown RBP3.33□□□□□ -1.88
ATXN3-248ENST00000558190 RDH5Q92781 318 aa3.33□□□□□ -1.88
ATXN3-248ENST00000558190 MRPL13Q9BYD1 178 aaKnown RBP3.33□□□□□ -1.88
ATXN3-248ENST00000558190 C5orf49A4QMS7 147 aa3.33□□□□□ -1.88
ATXN3-248ENST00000558190 MPZL1O95297 269 aa3.33□□□□□ -1.88
ATXN3-248ENST00000558190 RUNX2Q13950 521 aa3.33□□□□□ -1.88
ATXN3-248ENST00000558190 DDA1Q9BW61 102 aa3.33□□□□□ -1.88
ATXN3-248ENST00000558190 PIPOXQ9P0Z9 390 aa3.33□□□□□ -1.88
ATXN3-248ENST00000558190 C19orf53Q9UNZ5 99 aaPredicted RBP3.33□□□□□ -1.88
ATXN3-248ENST00000558190 C17orf105B2RV13 164 aa3.33□□□□□ -1.88
ATXN3-248ENST00000558190 KLF3P57682 345 aaPredicted RBP3.33□□□□□ -1.88
ATXN3-248ENST00000558190 KIAA0040Q15053 153 aa3.33□□□□□ -1.88
ATXN3-248ENST00000558190 ANKRD55Q3KP44 614 aa3.33□□□□□ -1.88
ATXN3-248ENST00000558190 GTF3AQ92664 365 aaKnown RBP3.33□□□□□ -1.88
ATXN3-248ENST00000558190 LHX3Q9UBR4 397 aa3.33□□□□□ -1.88
ATXN3-248ENST00000558190 KAT6AQ92794 2004 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 B4DGG1 531 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 OR2M7Q8NG81 312 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 ERGIC1Q969X5 290 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 PBOV1Q9GZY1 135 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 FAM234AQ9H0X4 552 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 PRSS16Q9NQE7 514 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 TRBV11-1A0A0K0K1C0 115 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 MAP1LC3B2A6NCE7 125 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 CHEK1O14757 476 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 SOCS5O75159 536 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 ZNF205O95201 554 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 ADH5P11766 374 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 SULT1A1P50225 295 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 DEFB108BQ8NET1 73 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 HSD17B8Q92506 261 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 MAP1LC3BQ9GZQ8 125 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 PLEK2Q9NYT0 353 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 GVINP1Q7Z2Y8 2422 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 TRGC1P0CF51 173 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 DMBX1Q8NFW5 382 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 DNAJC4Q9NNZ3 241 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 MBNL1Q9NR56 388 aaKnown RBP3.32□□□□□ -1.88
ATXN3-248ENST00000558190 TMEM184BQ9Y519 407 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-248ENST00000558190 LNP1A1A4G5 178 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 PLGLB1Q02325 96 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 OR2T6Q8NHC8 308 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 PINX1Q96BK5 328 aaKnown RBP3.32□□□□□ -1.88
ATXN3-248ENST00000558190 ATP10BO94823 1461 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 HSBP1O75506 76 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 LIM2P55344 173 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 KHDC3LQ587J8 217 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 MS4A4EQ96PG1 132 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 CA10Q9NS85 328 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 PVRP15151 417 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 ACKR3P25106 362 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 NPBWR2P48146 333 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 FHITP49789 147 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 REG4Q9BYZ8 158 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 SLC5A6Q9Y289 635 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 ADAM20O43506 726 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 NXPH2O95156 264 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 GALP22466 123 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 TRHRP34981 398 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-248ENST00000558190 SLC25A1P53007 311 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 EDDM3BP56851 147 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 CATSPERDQ86XM0 798 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 OR52N4Q8NGI2 321 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 OR5AC2Q9NZP5 309 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 CLDN16Q9Y5I7 305 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 NUP214P35658 2090 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-248ENST00000558190 ZNF749O43361 778 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 RAB32Q13637 225 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 ZNF385BQ569K4 471 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 MOGAT1Q96PD6 335 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 ZPBPQ9BS86 351 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 DPRXA6NFQ7 191 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 SSSCA1O60232 199 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 EPRSP07814 1512 aaKnown RBP3.32□□□□□ -1.88
ATXN3-248ENST00000558190 FGF2P09038 288 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 FUT3P21217 361 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 GPX4P36969 197 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-248ENST00000558190 C12orf76Q8N812 135 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-248ENST00000558190 OR51H1Q8NH63 302 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 OR51B6Q9H340 312 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 TAAR2Q9P1P5 351 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 PAGE4O60829 102 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 MBPP02686 304 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-248ENST00000558190 FZD5Q13467 585 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 RIMS4Q9H426 269 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-248ENST00000558190 KDM5CP41229 1560 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 A6NDN8 102 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 LDLRAD4O15165 306 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 OTX2P32243 289 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 AAED1Q7RTV5 226 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 SLC22A12Q96S37 553 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 GPA33Q99795 319 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 KCNMB2Q9Y691 235 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 FBLL1A6NHQ2 334 aaKnown RBP3.32□□□□□ -1.88
ATXN3-248ENST00000558190 PRF1P14222 555 aa3.32□□□□□ -1.88
ATXN3-248ENST00000558190 GPR84Q9NQS5 396 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms