RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 OR52H1Q8NGJ2 320 aa13.23□□□□□ -0.29
CDK4-215ENST00000553237 OTOSQ8NHW6 89 aa13.23□□□□□ -0.29
CDK4-215ENST00000553237 DACT3Q96B18 629 aaPredicted RBP13.23□□□□□ -0.29
CDK4-215ENST00000553237 ZNF48Q96MX3 618 aaPredicted RBP13.23□□□□□ -0.29
CDK4-215ENST00000553237 C14orf119Q9NWQ9 140 aa13.23□□□□□ -0.29
CDK4-215ENST00000553237 ERVK-18Q9QC07 812 aa13.23□□□□□ -0.29
CDK4-215ENST00000553237 KLHDC2Q9Y2U9 406 aa13.23□□□□□ -0.29
CDK4-215ENST00000553237 TRAV38-1A0A0B4J264 116 aa13.22□□□□□ -0.29
CDK4-215ENST00000553237 OOEPA6NGQ2 149 aa13.22□□□□□ -0.29
CDK4-215ENST00000553237 C22orf46C9J442 243 aa13.22□□□□□ -0.29
CDK4-215ENST00000553237 PHYHO14832 338 aa13.22□□□□□ -0.29
CDK4-215ENST00000553237 EGR1P18146 543 aa13.22□□□□□ -0.29
CDK4-215ENST00000553237 EPHA2P29317 976 aa13.22□□□□□ -0.29
CDK4-215ENST00000553237 KCNJ8Q15842 424 aa13.22□□□□□ -0.29
CDK4-215ENST00000553237 TUSC1Q2TAM9 212 aa13.22□□□□□ -0.29
CDK4-215ENST00000553237 ZFP1Q6P2D0 407 aa13.22□□□□□ -0.29
CDK4-215ENST00000553237 WDR86Q86TI4 376 aa13.22□□□□□ -0.29
CDK4-215ENST00000553237 C11orf53Q8IXP5 236 aa13.22□□□□□ -0.29
CDK4-215ENST00000553237 GCSAMQ8N6F7 178 aa13.22□□□□□ -0.29
CDK4-215ENST00000553237 ZNF454Q8N9F8 522 aa13.22□□□□□ -0.29
CDK4-215ENST00000553237 UPRTQ96BW1 309 aa13.22□□□□□ -0.29
CDK4-215ENST00000553237 RAB3IPQ96QF0 476 aaPredicted RBP13.22□□□□□ -0.29
CDK4-215ENST00000553237 CIB1Q99828 191 aa13.22□□□□□ -0.29
CDK4-215ENST00000553237 RHBDD3Q9Y3P4 386 aa13.22□□□□□ -0.29
CDK4-215ENST00000553237 DOCK11Q5JSL3 2073 aa13.22□□□□□ -0.29
CDK4-215ENST00000553237 TENM1Q9UKZ4 2725 aa13.21□□□□□ -0.29
CDK4-215ENST00000553237 TRAV40A0A0B4J280 105 aa13.21□□□□□ -0.29
CDK4-215ENST00000553237 DNAJC9-AS1A6NH13 148 aa13.21□□□□□ -0.29
CDK4-215ENST00000553237 TNFRSF13BO14836 293 aaPredicted RBP13.21□□□□□ -0.29
CDK4-215ENST00000553237 PRODHO43272 600 aa13.21□□□□□ -0.29
CDK4-215ENST00000553237 CFL1P23528 166 aaKnown RBP13.21□□□□□ -0.29
CDK4-215ENST00000553237 GNALP38405 381 aa13.21□□□□□ -0.29
CDK4-215ENST00000553237 FGF12P61328 243 aa13.21□□□□□ -0.29
CDK4-215ENST00000553237 CSNK2BP67870 215 aa13.21□□□□□ -0.29
CDK4-215ENST00000553237 BAMBIQ13145 260 aa13.21□□□□□ -0.29
CDK4-215ENST00000553237 APOFQ13790 326 aa13.21□□□□□ -0.29
CDK4-215ENST00000553237 SLC35D3Q5M8T2 416 aa13.21□□□□□ -0.29
CDK4-215ENST00000553237 RHOUQ7L0Q8 258 aa13.21□□□□□ -0.29
CDK4-215ENST00000553237 FAM90A1Q86YD7 464 aa13.21□□□□□ -0.29
CDK4-215ENST00000553237 C10orf67Q8IYJ2 551 aa13.21□□□□□ -0.29
CDK4-215ENST00000553237 C3orf56Q8N813 242 aa13.21□□□□□ -0.29
CDK4-215ENST00000553237 OR1M1Q8NGA1 313 aa13.21□□□□□ -0.29
CDK4-215ENST00000553237 PAPOLGQ9BWT3 736 aaKnown RBP13.21□□□□□ -0.29
CDK4-215ENST00000553237 SMURF1Q9HCE7 757 aa13.21□□□□□ -0.29
CDK4-215ENST00000553237 NBEAL1Q6ZS30 2694 aa13.21□□□□□ -0.3
CDK4-215ENST00000553237 ZAR1LA6NP61 321 aa13.2□□□□□ -0.3
CDK4-215ENST00000553237 M0R129 80 aa13.2□□□□□ -0.3
CDK4-215ENST00000553237 PSMD9O00233 223 aa13.2□□□□□ -0.3
CDK4-215ENST00000553237 ENSAO43768 121 aaKnown RBP13.2□□□□□ -0.3
CDK4-215ENST00000553237 PRKYO43930 277 aa13.2□□□□□ -0.3
CDK4-215ENST00000553237 LHBP01229 141 aa13.2□□□□□ -0.3
CDK4-215ENST00000553237 MRPL3P09001 348 aaKnown RBP13.2□□□□□ -0.3
CDK4-215ENST00000553237 PPIAL4GP0DN37 164 aa13.2□□□□□ -0.3
CDK4-215ENST00000553237 SLC2A5P22732 501 aa13.2□□□□□ -0.3
CDK4-215ENST00000553237 POLR2IP36954 125 aaKnown RBP13.2□□□□□ -0.3
CDK4-215ENST00000553237 COMPP49747 757 aaPredicted RBP13.2□□□□□ -0.3
CDK4-215ENST00000553237 NPY4RP50391 375 aa13.2□□□□□ -0.3
CDK4-215ENST00000553237 ELF3P78545 371 aaPredicted RBP13.2□□□□□ -0.3
CDK4-215ENST00000553237 SLX4IPQ5VYV7 408 aa13.2□□□□□ -0.3
CDK4-215ENST00000553237 CSNK2A3Q8NEV1 391 aa13.2□□□□□ -0.3
CDK4-215ENST00000553237 LRRC29Q8WV35 223 aa13.2□□□□□ -0.3
CDK4-215ENST00000553237 C1orf147Q96MC9 270 aaPredicted RBP13.2□□□□□ -0.3
CDK4-215ENST00000553237 OSBPL10Q9BXB5 764 aa13.2□□□□□ -0.3
CDK4-215ENST00000553237 PRRG3Q9BZD7 231 aa13.2□□□□□ -0.3
CDK4-215ENST00000553237 TRIM36Q9NQ86 728 aa13.2□□□□□ -0.3
CDK4-215ENST00000553237 ENOPH1Q9UHY7 261 aa13.2□□□□□ -0.3
CDK4-215ENST00000553237 LAMP5Q9UJQ1 280 aa13.2□□□□□ -0.3
CDK4-215ENST00000553237 MDFIC2A0A1B0GVS7 189 aa13.19□□□□□ -0.3
CDK4-215ENST00000553237 NDUFA2O43678 99 aa13.19□□□□□ -0.3
CDK4-215ENST00000553237 ALOX5APP20292 161 aa13.19□□□□□ -0.3
CDK4-215ENST00000553237 PRTN3P24158 256 aa13.19□□□□□ -0.3
CDK4-215ENST00000553237 ACKR3P25106 362 aa13.19□□□□□ -0.3
CDK4-215ENST00000553237 MTNR1AP48039 350 aa13.19□□□□□ -0.3
CDK4-215ENST00000553237 CD276Q5ZPR3 534 aa13.19□□□□□ -0.3
CDK4-215ENST00000553237 C12orf73Q69YU5 71 aa13.19□□□□□ -0.3
CDK4-215ENST00000553237 BRD3OSQ6XYD6 125 aa13.19□□□□□ -0.3
CDK4-215ENST00000553237 KRT77Q7Z794 578 aa13.19□□□□□ -0.3
CDK4-215ENST00000553237 OR8B12Q8NGG6 310 aa13.19□□□□□ -0.3
CDK4-215ENST00000553237 SEH1LQ96EE3 360 aa13.19□□□□□ -0.3
CDK4-215ENST00000553237 LYZL4Q96KX0 146 aa13.19□□□□□ -0.3
CDK4-215ENST00000553237 TEAD3Q99594 435 aa13.19□□□□□ -0.3
CDK4-215ENST00000553237 MICU1Q9BPX6 476 aa13.19□□□□□ -0.3
CDK4-215ENST00000553237 RBM4BQ9BQ04 359 aaKnown RBP13.19□□□□□ -0.3
CDK4-215ENST00000553237 PCGF1Q9BSM1 259 aa13.19□□□□□ -0.3
CDK4-215ENST00000553237 RIBC2Q9H4K1 309 aa13.19□□□□□ -0.3
CDK4-215ENST00000553237 RGCCQ9H4X1 137 aa13.19□□□□□ -0.3
CDK4-215ENST00000553237 RNPEPL1Q9HAU8 725 aa13.19□□□□□ -0.3
CDK4-215ENST00000553237 LRP12Q9Y561 859 aa13.19□□□□□ -0.3
CDK4-215ENST00000553237 CCDC182A6NF36 153 aa13.18□□□□□ -0.3
CDK4-215ENST00000553237 ANXA2P2A6NMY6 339 aa13.18□□□□□ -0.3
CDK4-215ENST00000553237 ZNF850A8MQ14 1090 aa13.18□□□□□ -0.3
CDK4-215ENST00000553237 CDIPTO14735 213 aa13.18□□□□□ -0.3
CDK4-215ENST00000553237 TMPRSS2O15393 492 aa13.18□□□□□ -0.3
CDK4-215ENST00000553237 FCN3O75636 299 aa13.18□□□□□ -0.3
CDK4-215ENST00000553237 PLATP00750 562 aa13.18□□□□□ -0.3
CDK4-215ENST00000553237 SFTPBP07988 381 aa13.18□□□□□ -0.3
CDK4-215ENST00000553237 PSMA6P60900 246 aaKnown RBP13.18□□□□□ -0.3
CDK4-215ENST00000553237 GMFBP60983 142 aa13.18□□□□□ -0.3
CDK4-215ENST00000553237 EFNB1P98172 346 aa13.18□□□□□ -0.3
CDK4-215ENST00000553237 PRDX4Q13162 271 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms