RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 OTUB2Q96DC9 234 aa3.13□□□□□ -1.91
LIMA1-205ENST00000550592 FAM210AQ96ND0 272 aa3.13□□□□□ -1.91
LIMA1-205ENST00000550592 XPO6Q96QU8 1125 aaKnown RBP3.13□□□□□ -1.91
LIMA1-205ENST00000550592 SLC29A1Q99808 456 aa3.13□□□□□ -1.91
LIMA1-205ENST00000550592 MRPL37Q9BZE1 423 aaKnown RBP3.13□□□□□ -1.91
LIMA1-205ENST00000550592 CXCL16Q9H2A7 254 aa3.13□□□□□ -1.91
LIMA1-205ENST00000550592 LHX5Q9H2C1 402 aa3.13□□□□□ -1.91
LIMA1-205ENST00000550592 RPF2Q9H7B2 306 aaKnown RBP3.13□□□□□ -1.91
LIMA1-205ENST00000550592 VPS37BQ9H9H4 285 aa3.13□□□□□ -1.91
LIMA1-205ENST00000550592 GCNT4Q9P109 453 aa3.13□□□□□ -1.91
LIMA1-205ENST00000550592 PITPNC1Q9UKF7 332 aa3.13□□□□□ -1.91
LIMA1-205ENST00000550592 WSB1Q9Y6I7 421 aa3.13□□□□□ -1.91
LIMA1-205ENST00000550592 UNC13CQ8NB66 2214 aa3.13□□□□□ -1.91
LIMA1-205ENST00000550592 SONP18583 2426 aaKnown RBP3.13□□□□□ -1.91
LIMA1-205ENST00000550592 NSD1Q96L73 2696 aaPredicted RBP3.12□□□□□ -1.91
LIMA1-205ENST00000550592 IGLV11-55A0A075B6I3 123 aa3.12□□□□□ -1.91
LIMA1-205ENST00000550592 A0A075B6Q4 140 aa3.12□□□□□ -1.91
LIMA1-205ENST00000550592 A0A1B0GUH1 482 aa3.12□□□□□ -1.91
LIMA1-205ENST00000550592 TMEM150BA6NC51 233 aa3.12□□□□□ -1.91
LIMA1-205ENST00000550592 DNALI1O14645 258 aaPredicted RBP3.12□□□□□ -1.91
LIMA1-205ENST00000550592 B4GALT5O43286 388 aa3.12□□□□□ -1.91
LIMA1-205ENST00000550592 CLPXO76031 633 aa3.12□□□□□ -1.91
LIMA1-205ENST00000550592 UTS2O95399 124 aa3.12□□□□□ -1.91
LIMA1-205ENST00000550592 ANXA5P08758 320 aa3.12□□□□□ -1.91
LIMA1-205ENST00000550592 NEFHP12036 1026 aa3.12□□□□□ -1.91
LIMA1-205ENST00000550592 HRH1P35367 487 aa3.12□□□□□ -1.91
LIMA1-205ENST00000550592 PRRX1P54821 245 aa3.12□□□□□ -1.91
LIMA1-205ENST00000550592 ACTA2P62736 377 aa3.12□□□□□ -1.91
LIMA1-205ENST00000550592 ACTG2P63267 376 aa3.12□□□□□ -1.91
LIMA1-205ENST00000550592 ACTC1P68032 377 aa3.12□□□□□ -1.91
LIMA1-205ENST00000550592 ACTA1P68133 377 aa3.12□□□□□ -1.91
LIMA1-205ENST00000550592 ADARB1P78563 741 aaKnown RBP3.12□□□□□ -1.91
LIMA1-205ENST00000550592 MRPL23Q16540 153 aaKnown RBP3.12□□□□□ -1.91
LIMA1-205ENST00000550592 SPANXN2Q5MJ10 180 aa3.12□□□□□ -1.91
LIMA1-205ENST00000550592 C9orf135Q5VTT2 229 aa3.12□□□□□ -1.91
LIMA1-205ENST00000550592 STRADAQ7RTN6 431 aa3.12□□□□□ -1.91
LIMA1-205ENST00000550592 MMAAQ8IVH4 418 aaKnown RBP3.12□□□□□ -1.91
LIMA1-205ENST00000550592 Q8N9L7 120 aa3.12□□□□□ -1.91
LIMA1-205ENST00000550592 MNS1Q8NEH6 495 aa3.12□□□□□ -1.91
LIMA1-205ENST00000550592 SPPL2BQ8TCT7 592 aa3.12□□□□□ -1.91
LIMA1-205ENST00000550592 LKAAEAR1Q8TD35 194 aa3.12□□□□□ -1.91
LIMA1-205ENST00000550592 MCUR1Q96AQ8 359 aa3.12□□□□□ -1.91
LIMA1-205ENST00000550592 KIAA1143Q96AT1 154 aaPredicted RBP3.12□□□□□ -1.91
LIMA1-205ENST00000550592 CEP170P1Q96L14 293 aa3.12□□□□□ -1.91
LIMA1-205ENST00000550592 SMR3AQ99954 134 aa3.12□□□□□ -1.91
LIMA1-205ENST00000550592 NEUROG2Q9H2A3 272 aa3.12□□□□□ -1.91
LIMA1-205ENST00000550592 TMEM185BQ9H7F4 350 aa3.12□□□□□ -1.91
LIMA1-205ENST00000550592 KIAA1257Q9ULG3 409 aa3.12□□□□□ -1.91
LIMA1-205ENST00000550592 TRIP11Q15643 1979 aa3.12□□□□□ -1.91
LIMA1-205ENST00000550592 NBEAL2Q6ZNJ1 2754 aa3.12□□□□□ -1.91
LIMA1-205ENST00000550592 MYH10P35580 1976 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.11□□□□□ -1.91
LIMA1-205ENST00000550592 F6UB75 175 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 AIM2O14862 343 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 KMOO15229 486 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 CHMP2AO43633 222 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 CDH16O75309 829 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 OR2F2O95006 317 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 ZNF250P15622 560 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 TCN2P20062 427 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 RRM2P31350 389 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 ZNF136P52737 540 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 RGS8P57771 180 aaPredicted RBP3.11□□□□□ -1.91
LIMA1-205ENST00000550592 RAB10P61026 200 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 NUTF2P61970 127 aaKnown RBP3.11□□□□□ -1.91
LIMA1-205ENST00000550592 PSMC5P62195 406 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 SLC7A9P82251 487 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 PON3Q15166 354 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 CHRNA6Q15825 494 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 ALKBH6Q3KRA9 238 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 Q6P435 159 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 GUSBP11Q6P575 273 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 ABHD13Q7L211 337 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 ZNF786Q8N393 782 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 STPG2Q8N412 459 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 MARCH1Q8TCQ1 289 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 SLC7A13Q8TCU3 470 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 NAT6Q93015 286 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 FAM104AQ969W3 186 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 C19orf60Q96EN9 201 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 DUS3LQ96G46 650 aaKnown RBP3.11□□□□□ -1.91
LIMA1-205ENST00000550592 ZNF414Q96IQ9 312 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 WFIKKN1Q96NZ8 548 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 C20orf24Q9BUV8 137 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 SYNDIG1Q9H7V2 258 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 ZNF160Q9HCG1 818 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 GPATCH2LQ9NWQ4 482 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 VANGL2Q9ULK5 521 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 GOLT1BQ9Y3E0 138 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 U3KQA8 63 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 WNK1Q9H4A3 2382 aa3.11□□□□□ -1.91
LIMA1-205ENST00000550592 AKAP6Q13023 2319 aa3.1□□□□□ -1.91
LIMA1-205ENST00000550592 TACC2O95359 2948 aa3.1□□□□□ -1.91
LIMA1-205ENST00000550592 TGP01266 2768 aa3.1□□□□□ -1.91
LIMA1-205ENST00000550592 A0A096LNJ9 63 aa3.1□□□□□ -1.91
LIMA1-205ENST00000550592 GLYATL1P3A0A0U1RQE8 302 aa3.1□□□□□ -1.91
LIMA1-205ENST00000550592 ZNF816-ZNF321PA0A0X1KG74 233 aa3.1□□□□□ -1.91
LIMA1-205ENST00000550592 H0YHG0 523 aa3.1□□□□□ -1.91
LIMA1-205ENST00000550592 SIRPB1O00241 398 aa3.1□□□□□ -1.91
LIMA1-205ENST00000550592 CD5LO43866 347 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms