RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 PIGTQ969N2 578 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 UTP23Q9BRU9 249 aaKnown RBP9.82□□□□□ -0.84
LINC00661-204ENST00000549354 SLC25A32Q9H2D1 315 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 TNFSF18Q9UNG2 199 aa9.82□□□□□ -0.84
LINC00661-204ENST00000549354 IGLV3-32A0A0A0MS00 114 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 MEX3AA1L020 520 aaKnown RBP9.81□□□□□ -0.84
LINC00661-204ENST00000549354 BGLAPP02818 100 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 ADCYAP1P18509 176 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 SERPINA2P20848 420 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 TLE1Q04724 770 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 TGIF1Q15583 401 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 FAM57BQ71RH2 274 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 SEMA6DQ8NFY4 1073 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 OR6S1Q8NH40 331 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 DYRK2Q92630 601 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 TOMM40LQ969M1 308 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 ADAT3Q96EY9 351 aaPredicted RBP9.81□□□□□ -0.84
LINC00661-204ENST00000549354 DNTTIP1Q9H147 329 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 ARRDC1-AS1Q9H2J1 176 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 RYDENQ9NUL5 291 aaKnown RBP9.81□□□□□ -0.84
LINC00661-204ENST00000549354 FAM86C1Q9NVL1 165 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 OR52A1Q9UKL2 312 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 ARHGAP21Q5T5U3 1957 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 ZFAND5O76080 213 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 SERPINA5P05154 406 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 JMJD7P0C870 316 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 CCL4P13236 92 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 GABRR1P24046 479 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 AGTR1P30556 359 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 NPBWR1P48145 328 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 AIMP2Q13155 320 aaKnown RBP9.81□□□□□ -0.84
LINC00661-204ENST00000549354 PCOLCEQ15113 449 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 EMC4Q5J8M3 183 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 C5orf24Q7Z6I8 188 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 MRI1Q9BV20 369 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 ZNF700Q9H0M5 742 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 SMOC1Q9H4F8 434 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 A0A0D9SG52 128 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 TRBV11-1A0A0K0K1C0 115 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 A0A1B0GW55 424 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 WIPF3A6NGB9 483 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 MSGN1A6NI15 193 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 BCL2L11O43521 198 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 KLF7O75840 302 aaPredicted RBP9.81□□□□□ -0.84
LINC00661-204ENST00000549354 ZNF735P0CB33 412 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 DUX4L2P0CJ85 424 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 DUX4L3P0CJ86 424 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 DUX4L4P0CJ87 422 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 DUX4L5P0CJ88 424 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 DUX4L6P0CJ89 424 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 DUX4L7P0CJ90 424 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 CCNOP22674 350 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 POLR2HP52434 150 aaKnown RBP9.81□□□□□ -0.84
LINC00661-204ENST00000549354 FXYD4P59646 89 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 EGR3Q06889 387 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 ACOT7LQ6ZUV0 252 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 KCNRGQ8N5I3 272 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 ZNF283Q8N7M2 679 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 RPS4Y2Q8TD47 263 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 NTNG2Q96CW9 530 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 BARX1Q9HBU1 254 aaPredicted RBP9.81□□□□□ -0.84
LINC00661-204ENST00000549354 DUX4Q9UBX2 424 aa9.81□□□□□ -0.84
LINC00661-204ENST00000549354 ABCA1O95477 2261 aa9.8□□□□□ -0.84
LINC00661-204ENST00000549354 TRAV36DV7A0A075B6V5 113 aa9.8□□□□□ -0.84
LINC00661-204ENST00000549354 ANKUB1A6NFN9 424 aa9.8□□□□□ -0.84
LINC00661-204ENST00000549354 ZNF878C9JN71 531 aa9.8□□□□□ -0.84
LINC00661-204ENST00000549354 HSPB6O14558 160 aa9.8□□□□□ -0.84
LINC00661-204ENST00000549354 SOCS1O15524 211 aa9.8□□□□□ -0.84
LINC00661-204ENST00000549354 ANGPTL7O43827 346 aa9.8□□□□□ -0.84
LINC00661-204ENST00000549354 MT-ATP6P00846 226 aa9.8□□□□□ -0.84
LINC00661-204ENST00000549354 CD1AP06126 327 aa9.8□□□□□ -0.84
LINC00661-204ENST00000549354 UMODP07911 640 aa9.8□□□□□ -0.84
LINC00661-204ENST00000549354 RD3LP0DJH9 198 aa9.8□□□□□ -0.84
LINC00661-204ENST00000549354 OPRM1P35372 400 aa9.8□□□□□ -0.84
LINC00661-204ENST00000549354 RPL27P61353 136 aaKnown RBP9.8□□□□□ -0.84
LINC00661-204ENST00000549354 C17orf67Q0P5P2 114 aa9.8□□□□□ -0.84
LINC00661-204ENST00000549354 SP6Q3SY56 376 aa9.8□□□□□ -0.84
LINC00661-204ENST00000549354 KCTD18Q6PI47 426 aaPredicted RBP9.8□□□□□ -0.84
LINC00661-204ENST00000549354 KLHL24Q6TFL4 600 aa9.8□□□□□ -0.84
LINC00661-204ENST00000549354 C5orf46Q6UWT4 87 aa9.8□□□□□ -0.84
LINC00661-204ENST00000549354 MOB3CQ70IA8 216 aa9.8□□□□□ -0.84
LINC00661-204ENST00000549354 GRINAQ7Z429 371 aa9.8□□□□□ -0.84
LINC00661-204ENST00000549354 ADGRE4PQ86SQ3 457 aa9.8□□□□□ -0.84
LINC00661-204ENST00000549354 FOXRED1Q96CU9 486 aaPredicted RBP9.8□□□□□ -0.84
LINC00661-204ENST00000549354 RRNAD1Q96FB5 475 aaKnown RBP9.8□□□□□ -0.84
LINC00661-204ENST00000549354 IMMP1LQ96LU5 166 aa9.8□□□□□ -0.84
LINC00661-204ENST00000549354 PHB2Q99623 299 aa9.8□□□□□ -0.84
LINC00661-204ENST00000549354 MYOTQ9UBF9 498 aa9.8□□□□□ -0.84
LINC00661-204ENST00000549354 HHLA2Q9UM44 414 aa9.8□□□□□ -0.84
LINC00661-204ENST00000549354 TMEM218A2RU14 115 aa9.8□□□□□ -0.84
LINC00661-204ENST00000549354 C9orf170A2RU37 121 aa9.8□□□□□ -0.84
LINC00661-204ENST00000549354 ZNF98A6NK75 572 aa9.8□□□□□ -0.84
LINC00661-204ENST00000549354 LINC01387J3KSC0 135 aa9.8□□□□□ -0.84
LINC00661-204ENST00000549354 KLK3P07288 261 aaPredicted RBP9.8□□□□□ -0.84
LINC00661-204ENST00000549354 CALCRP30988 508 aa9.8□□□□□ -0.84
LINC00661-204ENST00000549354 MECP2P51608 486 aaKnown RBP9.8□□□□□ -0.84
LINC00661-204ENST00000549354 FGL1Q08830 312 aa9.8□□□□□ -0.84
LINC00661-204ENST00000549354 TMEM176BQ3YBM2 270 aaPredicted RBP9.8□□□□□ -0.84
LINC00661-204ENST00000549354 TCEAL6Q6IPX3 200 aa9.8□□□□□ -0.84
LINC00661-204ENST00000549354 ZNF585AQ6P3V2 769 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms