RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 MICU1Q9BPX6 476 aa13.31□□□□□ -0.28
DDX54-204ENST00000546898 C9orf16Q9BUW7 83 aa13.31□□□□□ -0.28
DDX54-204ENST00000546898 PAPOLGQ9BWT3 736 aaKnown RBP13.31□□□□□ -0.28
DDX54-204ENST00000546898 C1orf123Q9NWV4 160 aa13.31□□□□□ -0.28
DDX54-204ENST00000546898 OR5V1Q9UGF6 321 aa13.31□□□□□ -0.28
DDX54-204ENST00000546898 NUFIP1Q9UHK0 495 aaKnown RBP13.31□□□□□ -0.28
DDX54-204ENST00000546898 METRNQ9UJH8 293 aa13.31□□□□□ -0.28
DDX54-204ENST00000546898 A6NLC8 198 aa13.3□□□□□ -0.28
DDX54-204ENST00000546898 LGALS8O00214 317 aa13.3□□□□□ -0.28
DDX54-204ENST00000546898 PSMD9O00233 223 aa13.3□□□□□ -0.28
DDX54-204ENST00000546898 CST4P01036 141 aa13.3□□□□□ -0.28
DDX54-204ENST00000546898 GRPP07492 148 aa13.3□□□□□ -0.28
DDX54-204ENST00000546898 ACKR3P25106 362 aa13.3□□□□□ -0.28
DDX54-204ENST00000546898 FAM201AQ5SY85 155 aa13.3□□□□□ -0.28
DDX54-204ENST00000546898 GALNT4Q8N4A0 578 aa13.3□□□□□ -0.28
DDX54-204ENST00000546898 FAM81AQ8TBF8 368 aa13.3□□□□□ -0.28
DDX54-204ENST00000546898 TMEM158Q8WZ71 300 aa13.3□□□□□ -0.28
DDX54-204ENST00000546898 ITPKCQ96DU7 683 aa13.3□□□□□ -0.28
DDX54-204ENST00000546898 HRASLS5Q96KN8 279 aa13.3□□□□□ -0.28
DDX54-204ENST00000546898 LYZL4Q96KX0 146 aa13.3□□□□□ -0.28
DDX54-204ENST00000546898 MDFIQ99750 246 aa13.3□□□□□ -0.28
DDX54-204ENST00000546898 RTL8AQ9BWD3 113 aa13.3□□□□□ -0.28
DDX54-204ENST00000546898 SSBP3Q9BWW4 388 aaPredicted RBP13.3□□□□□ -0.28
DDX54-204ENST00000546898 TTTY10Q9BZA0 68 aa13.3□□□□□ -0.28
DDX54-204ENST00000546898 PBOV1Q9GZY1 135 aa13.3□□□□□ -0.28
DDX54-204ENST00000546898 METTL17Q9H7H0 456 aaPredicted RBP13.3□□□□□ -0.28
DDX54-204ENST00000546898 RNPEPL1Q9HAU8 725 aa13.3□□□□□ -0.28
DDX54-204ENST00000546898 S100A14Q9HCY8 104 aa13.3□□□□□ -0.28
DDX54-204ENST00000546898 IMPAD1Q9NX62 359 aa13.3□□□□□ -0.28
DDX54-204ENST00000546898 RHBDD3Q9Y3P4 386 aa13.3□□□□□ -0.28
DDX54-204ENST00000546898 ZNF816-ZNF321PA0A0X1KG74 233 aa13.29□□□□□ -0.28
DDX54-204ENST00000546898 TMEM210A6NLX4 147 aa13.29□□□□□ -0.28
DDX54-204ENST00000546898 AVPP01185 164 aa13.29□□□□□ -0.28
DDX54-204ENST00000546898 IGLV3-1P01715 115 aa13.29□□□□□ -0.28
DDX54-204ENST00000546898 ZNF12P17014 697 aa13.29□□□□□ -0.28
DDX54-204ENST00000546898 MAP2K3P46734 347 aa13.29□□□□□ -0.28
DDX54-204ENST00000546898 GNB2P62879 340 aa13.29□□□□□ -0.28
DDX54-204ENST00000546898 PRDX4Q13162 271 aa13.29□□□□□ -0.28
DDX54-204ENST00000546898 ZBTB37Q5TC79 503 aa13.29□□□□□ -0.28
DDX54-204ENST00000546898 C1orf229Q6ZS94 237 aaPredicted RBP13.29□□□□□ -0.28
DDX54-204ENST00000546898 KRT74Q7RTS7 529 aa13.29□□□□□ -0.28
DDX54-204ENST00000546898 WDR86Q86TI4 376 aa13.29□□□□□ -0.28
DDX54-204ENST00000546898 PQLC1Q8N2U9 271 aa13.29□□□□□ -0.28
DDX54-204ENST00000546898 CBR4Q8N4T8 237 aa13.29□□□□□ -0.28
DDX54-204ENST00000546898 GCSAMQ8N6F7 178 aa13.29□□□□□ -0.28
DDX54-204ENST00000546898 OR1M1Q8NGA1 313 aa13.29□□□□□ -0.28
DDX54-204ENST00000546898 EME1Q96AY2 570 aa13.29□□□□□ -0.28
DDX54-204ENST00000546898 TLNRD1Q9H1K6 362 aa13.29□□□□□ -0.28
DDX54-204ENST00000546898 C7orf69Q9H7B7 122 aa13.29□□□□□ -0.28
DDX54-204ENST00000546898 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.29□□□□□ -0.28
DDX54-204ENST00000546898 LOC105371242A0A075B767 164 aa13.28□□□□□ -0.28
DDX54-204ENST00000546898 TRAV38-1A0A0B4J264 116 aa13.28□□□□□ -0.28
DDX54-204ENST00000546898 hCG_1807616A0A1W2PRN6 198 aa13.28□□□□□ -0.28
DDX54-204ENST00000546898 OOEPA6NGQ2 149 aa13.28□□□□□ -0.28
DDX54-204ENST00000546898 E9PQ18 207 aa13.28□□□□□ -0.28
DDX54-204ENST00000546898 LOC110117498-PIK3R3F6TDL0 507 aa13.28□□□□□ -0.28
DDX54-204ENST00000546898 TRAPPC2LH3BP13 241 aa13.28□□□□□ -0.28
DDX54-204ENST00000546898 NDUFA2O43678 99 aa13.28□□□□□ -0.28
DDX54-204ENST00000546898 TCF21O43680 179 aa13.28□□□□□ -0.28
DDX54-204ENST00000546898 SRSF10O75494 262 aaKnown RBP13.28□□□□□ -0.28
DDX54-204ENST00000546898 KRT8P05787 483 aa13.28□□□□□ -0.28
DDX54-204ENST00000546898 OR2T7P0C7T2 308 aa13.28□□□□□ -0.28
DDX54-204ENST00000546898 CD80P33681 288 aa13.28□□□□□ -0.28
DDX54-204ENST00000546898 PSMB10P40306 273 aa13.28□□□□□ -0.28
DDX54-204ENST00000546898 PITPNBP48739 271 aa13.28□□□□□ -0.28
DDX54-204ENST00000546898 ZNF154Q13106 437 aa13.28□□□□□ -0.28
DDX54-204ENST00000546898 SLC25A30Q5SVS4 291 aa13.28□□□□□ -0.28
DDX54-204ENST00000546898 ZNF826PQ6ZT77 177 aa13.28□□□□□ -0.28
DDX54-204ENST00000546898 COMMD2Q86X83 199 aa13.28□□□□□ -0.28
DDX54-204ENST00000546898 ZDHHC23Q8IYP9 409 aa13.28□□□□□ -0.28
DDX54-204ENST00000546898 DEFB108BQ8NET1 73 aa13.28□□□□□ -0.28
DDX54-204ENST00000546898 OR2T27Q8NH04 317 aa13.28□□□□□ -0.28
DDX54-204ENST00000546898 NANPQ8TBE9 248 aa13.28□□□□□ -0.28
DDX54-204ENST00000546898 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.28□□□□□ -0.28
DDX54-204ENST00000546898 CLN8Q9UBY8 286 aa13.28□□□□□ -0.28
DDX54-204ENST00000546898 MRM2Q9UI43 246 aaKnown RBP13.28□□□□□ -0.28
DDX54-204ENST00000546898 INSIG2Q9Y5U4 225 aa13.28□□□□□ -0.28
DDX54-204ENST00000546898 R4GMQ9 66 aa13.28□□□□□ -0.28
DDX54-204ENST00000546898 FBN1P35555 2871 aaKnown RBP13.28□□□□□ -0.28
DDX54-204ENST00000546898 A0A0A6YYJ9 748 aa13.27□□□□□ -0.29
DDX54-204ENST00000546898 ZNF850A8MQ14 1090 aa13.27□□□□□ -0.29
DDX54-204ENST00000546898 RNF212BA8MTL3 300 aa13.27□□□□□ -0.29
DDX54-204ENST00000546898 MTRF1O75570 445 aaKnown RBP13.27□□□□□ -0.29
DDX54-204ENST00000546898 FSHBP01225 129 aa13.27□□□□□ -0.29
DDX54-204ENST00000546898 LHBP01229 141 aa13.27□□□□□ -0.29
DDX54-204ENST00000546898 NPY4RP50391 375 aa13.27□□□□□ -0.29
DDX54-204ENST00000546898 SNRPGP62308 76 aaKnown RBP13.27□□□□□ -0.29
DDX54-204ENST00000546898 MFGE8Q08431 387 aaPredicted RBP13.27□□□□□ -0.29
DDX54-204ENST00000546898 BCL2L15Q5TBC7 163 aa13.27□□□□□ -0.29
DDX54-204ENST00000546898 LIPNQ5VXI9 398 aa13.27□□□□□ -0.29
DDX54-204ENST00000546898 MEDAGQ5VYS4 303 aa13.27□□□□□ -0.29
DDX54-204ENST00000546898 TEX36Q5VZQ5 186 aa13.27□□□□□ -0.29
DDX54-204ENST00000546898 WDR82Q6UXN9 313 aa13.27□□□□□ -0.29
DDX54-204ENST00000546898 C11orf53Q8IXP5 236 aa13.27□□□□□ -0.29
DDX54-204ENST00000546898 SEMA6DQ8NFY4 1073 aa13.27□□□□□ -0.29
DDX54-204ENST00000546898 OR51E1Q8TCB6 317 aa13.27□□□□□ -0.29
DDX54-204ENST00000546898 OR5P3Q8WZ94 311 aa13.27□□□□□ -0.29
DDX54-204ENST00000546898 PIGCQ92535 297 aa13.27□□□□□ -0.29
DDX54-204ENST00000546898 HIST1H2AAQ96QV6 131 aa13.27□□□□□ -0.29
DDX54-204ENST00000546898 APOL4Q9BPW4 351 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms