RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 EXOSC1Q9Y3B2 195 aaKnown RBP12.24□□□□□ -0.45
DDX54-203ENST00000546869 RHBDD3Q9Y3P4 386 aa12.24□□□□□ -0.45
DDX54-203ENST00000546869 V9GYS6 101 aa12.24□□□□□ -0.45
DDX54-203ENST00000546869 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.23□□□□□ -0.45
DDX54-203ENST00000546869 ZNF816-ZNF321PA0A0X1KG74 233 aa12.23□□□□□ -0.45
DDX54-203ENST00000546869 F5H5P2 479 aa12.23□□□□□ -0.45
DDX54-203ENST00000546869 J3QLW9 94 aa12.23□□□□□ -0.45
DDX54-203ENST00000546869 CDC14BO60729 498 aa12.23□□□□□ -0.45
DDX54-203ENST00000546869 ISG15P05161 165 aa12.23□□□□□ -0.45
DDX54-203ENST00000546869 ZNF19P17023 458 aa12.23□□□□□ -0.45
DDX54-203ENST00000546869 GPR6P46095 362 aaPredicted RBP12.23□□□□□ -0.45
DDX54-203ENST00000546869 MED21Q13503 144 aa12.23□□□□□ -0.45
DDX54-203ENST00000546869 CARTPTQ16568 116 aa12.23□□□□□ -0.45
DDX54-203ENST00000546869 FAM76BQ5HYJ3 339 aa12.23□□□□□ -0.45
DDX54-203ENST00000546869 WDR38Q5JTN6 314 aa12.23□□□□□ -0.45
DDX54-203ENST00000546869 C6orf141Q5SZD1 244 aa12.23□□□□□ -0.45
DDX54-203ENST00000546869 RNLSQ5VYX0 342 aa12.23□□□□□ -0.45
DDX54-203ENST00000546869 PRSS35Q8N3Z0 413 aa12.23□□□□□ -0.45
DDX54-203ENST00000546869 OR2G2Q8NGZ5 317 aa12.23□□□□□ -0.45
DDX54-203ENST00000546869 CCL17Q92583 94 aa12.23□□□□□ -0.45
DDX54-203ENST00000546869 HPS1Q92902 700 aa12.23□□□□□ -0.45
DDX54-203ENST00000546869 C4orf36Q96KX1 117 aa12.23□□□□□ -0.45
DDX54-203ENST00000546869 SOX7Q9BT81 388 aa12.23□□□□□ -0.45
DDX54-203ENST00000546869 ADAT1Q9BUB4 502 aaKnown RBP12.23□□□□□ -0.45
DDX54-203ENST00000546869 RASSF4Q9H2L5 321 aa12.23□□□□□ -0.45
DDX54-203ENST00000546869 TMEM106BQ9NUM4 274 aa12.23□□□□□ -0.45
DDX54-203ENST00000546869 FRRS1LQ9P0K9 344 aa12.23□□□□□ -0.45
DDX54-203ENST00000546869 VPS13CQ709C8 3753 aa12.23□□□□□ -0.45
DDX54-203ENST00000546869 FLNAP21333 2647 aaKnown RBP12.22□□□□□ -0.45
DDX54-203ENST00000546869 CLDN25C9JDP6 229 aa12.22□□□□□ -0.45
DDX54-203ENST00000546869 HTR1AP08908 422 aa12.22□□□□□ -0.45
DDX54-203ENST00000546869 UBCP0CG48 685 aaKnown RBP12.22□□□□□ -0.45
DDX54-203ENST00000546869 ZNF12P17014 697 aa12.22□□□□□ -0.45
DDX54-203ENST00000546869 GNALP38405 381 aa12.22□□□□□ -0.45
DDX54-203ENST00000546869 TGM4P49221 684 aa12.22□□□□□ -0.45
DDX54-203ENST00000546869 ST3GAL4Q11206 333 aa12.22□□□□□ -0.45
DDX54-203ENST00000546869 CCDC58Q4VC31 144 aa12.22□□□□□ -0.45
DDX54-203ENST00000546869 TMEM244Q5VVB8 128 aa12.22□□□□□ -0.45
DDX54-203ENST00000546869 TMEM42Q69YG0 159 aa12.22□□□□□ -0.45
DDX54-203ENST00000546869 TMPRSS11AQ6ZMR5 421 aa12.22□□□□□ -0.45
DDX54-203ENST00000546869 OR14K1Q8NGZ2 314 aa12.22□□□□□ -0.45
DDX54-203ENST00000546869 RAB1CQ92928 201 aa12.22□□□□□ -0.45
DDX54-203ENST00000546869 C10orf35Q96D05 121 aa12.22□□□□□ -0.45
DDX54-203ENST00000546869 ITPKCQ96DU7 683 aa12.22□□□□□ -0.45
DDX54-203ENST00000546869 TIMD4Q96H15 378 aa12.22□□□□□ -0.45
DDX54-203ENST00000546869 C1orf159Q96HA4 380 aa12.22□□□□□ -0.45
DDX54-203ENST00000546869 ISG20L2Q9H9L3 353 aaKnown RBP12.22□□□□□ -0.45
DDX54-203ENST00000546869 ENPP5Q9UJA9 477 aa12.22□□□□□ -0.45
DDX54-203ENST00000546869 GTF2A1LQ9UNN4 478 aa12.22□□□□□ -0.45
DDX54-203ENST00000546869 CACNG2Q9Y698 323 aa12.22□□□□□ -0.45
DDX54-203ENST00000546869 F8P00451 2351 aa12.21□□□□□ -0.45
DDX54-203ENST00000546869 LOC100289279A0A1B0GTE1 492 aa12.21□□□□□ -0.45
DDX54-203ENST00000546869 ANXA2P2A6NMY6 339 aa12.21□□□□□ -0.45
DDX54-203ENST00000546869 TMEM178BH3BS89 294 aa12.21□□□□□ -0.45
DDX54-203ENST00000546869 P2RY10O00398 339 aa12.21□□□□□ -0.45
DDX54-203ENST00000546869 PPIHO43447 177 aaKnown RBP12.21□□□□□ -0.45
DDX54-203ENST00000546869 XPNPEP2O43895 674 aa12.21□□□□□ -0.45
DDX54-203ENST00000546869 CCDC159P0C7I6 412 aa12.21□□□□□ -0.45
DDX54-203ENST00000546869 MYL12AP19105 171 aa12.21□□□□□ -0.45
DDX54-203ENST00000546869 CPT2P23786 658 aa12.21□□□□□ -0.45
DDX54-203ENST00000546869 PSMB10P40306 273 aa12.21□□□□□ -0.45
DDX54-203ENST00000546869 KIR3DL2P43630 455 aa12.21□□□□□ -0.45
DDX54-203ENST00000546869 ETV1P50549 477 aa12.21□□□□□ -0.45
DDX54-203ENST00000546869 CHN2P52757 468 aa12.21□□□□□ -0.45
DDX54-203ENST00000546869 GBX2P52951 348 aaPredicted RBP12.21□□□□□ -0.45
DDX54-203ENST00000546869 NANOS3P60323 173 aaKnown RBP12.21□□□□□ -0.45
DDX54-203ENST00000546869 ALKBH1Q13686 389 aaKnown RBP12.21□□□□□ -0.45
DDX54-203ENST00000546869 PEG10Q86TG7 708 aaKnown RBP12.21□□□□□ -0.45
DDX54-203ENST00000546869 BPIFB6Q8NFQ5 453 aa12.21□□□□□ -0.45
DDX54-203ENST00000546869 OR8S1Q8NH09 359 aa12.21□□□□□ -0.45
DDX54-203ENST00000546869 OR52N1Q8NH53 320 aa12.21□□□□□ -0.45
DDX54-203ENST00000546869 OR5P3Q8WZ94 311 aa12.21□□□□□ -0.45
DDX54-203ENST00000546869 FAM71F1Q96KD3 344 aaPredicted RBP12.21□□□□□ -0.45
DDX54-203ENST00000546869 PAPOLGQ9BWT3 736 aaKnown RBP12.21□□□□□ -0.45
DDX54-203ENST00000546869 TLNRD1Q9H1K6 362 aa12.21□□□□□ -0.45
DDX54-203ENST00000546869 CHCHD3Q9NX63 227 aaKnown RBP12.21□□□□□ -0.45
DDX54-203ENST00000546869 BABAM2Q9NXR7 383 aa12.21□□□□□ -0.45
DDX54-203ENST00000546869 PIGLQ9Y2B2 252 aa12.21□□□□□ -0.45
DDX54-203ENST00000546869 NPTNQ9Y639 398 aa12.21□□□□□ -0.45
DDX54-203ENST00000546869 CHD3Q12873 2000 aaKnown RBP12.21□□□□□ -0.46
DDX54-203ENST00000546869 IGHV4-61A0A0C4DH41 118 aa12.2□□□□□ -0.46
DDX54-203ENST00000546869 A0A1B0GVI7 797 aa12.2□□□□□ -0.46
DDX54-203ENST00000546869 TMEM210A6NLX4 147 aa12.2□□□□□ -0.46
DDX54-203ENST00000546869 LRRC30A6NM36 301 aa12.2□□□□□ -0.46
DDX54-203ENST00000546869 OR4C45A6NMZ5 311 aa12.2□□□□□ -0.46
DDX54-203ENST00000546869 ZNF850A8MQ14 1090 aa12.2□□□□□ -0.46
DDX54-203ENST00000546869 SYT7O43581 403 aa12.2□□□□□ -0.46
DDX54-203ENST00000546869 CFHR2P36980 270 aa12.2□□□□□ -0.46
DDX54-203ENST00000546869 PMELP40967 661 aa12.2□□□□□ -0.46
DDX54-203ENST00000546869 CDH15P55291 814 aa12.2□□□□□ -0.46
DDX54-203ENST00000546869 PRDX4Q13162 271 aa12.2□□□□□ -0.46
DDX54-203ENST00000546869 CEACAM21Q3KPI0 293 aa12.2□□□□□ -0.46
DDX54-203ENST00000546869 COMMD2Q86X83 199 aa12.2□□□□□ -0.46
DDX54-203ENST00000546869 LURAP1LQ8IV03 231 aa12.2□□□□□ -0.46
DDX54-203ENST00000546869 ZDHHC23Q8IYP9 409 aa12.2□□□□□ -0.46
DDX54-203ENST00000546869 C1orf87Q8N0U7 546 aa12.2□□□□□ -0.46
DDX54-203ENST00000546869 KLHL36Q8N4N3 616 aa12.2□□□□□ -0.46
DDX54-203ENST00000546869 ZNF485Q8NCK3 441 aa12.2□□□□□ -0.46
DDX54-203ENST00000546869 OR5A2Q8NGI9 324 aa12.2□□□□□ -0.46
DDX54-203ENST00000546869 PIGCQ92535 297 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms