RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 LSM6P62312 80 aaKnown RBP5.72□□□□□ -1.49
SNHG1-225ENST00000545920 TLE3Q04726 772 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 IL15RAQ13261 267 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 UNC119Q13432 240 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 NNATQ16517 81 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 DEFB110Q30KQ9 67 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 MS4A18Q3C1V0 323 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 FAM74A3Q4VXF1 159 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 GPR157Q5UAW9 335 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 ZNF585AQ6P3V2 769 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 CORO6Q6QEF8 472 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 TMPRSS9Q7Z410 1059 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 MARCH3Q86UD3 253 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 LDLRAD3Q86YD5 345 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 PLXDC1Q8IUK5 500 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 C9orf40Q8IXQ3 194 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 FAM71E2Q8N5Q1 922 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 POC1AQ8NBT0 407 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 ACBD4Q8NC06 268 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 C1orf162Q8NEQ5 155 aaPredicted RBP5.72□□□□□ -1.49
SNHG1-225ENST00000545920 LFNGQ8NES3 379 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 OR51A2Q8NGJ7 313 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 OR5L2Q8NGL0 311 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 OR2AJ1Q8NGZ0 328 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 LYPD6BQ8NI32 183 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 PATE1Q8WXA2 126 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 PP6455Q8WZ26 134 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 FGGYQ96C11 551 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 SLC25A36Q96CQ1 311 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 SLAMF6Q96DU3 332 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 MRPL38Q96DV4 380 aaKnown RBP5.72□□□□□ -1.49
SNHG1-225ENST00000545920 ZNF75AQ96N20 296 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 NRIP2Q9BQI9 281 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 RNF126Q9BV68 326 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 LRRC61Q9BV99 259 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 TM2D1Q9BX74 207 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 TMEM59Q9BXS4 323 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 MRPL13Q9BYD1 178 aaKnown RBP5.72□□□□□ -1.49
SNHG1-225ENST00000545920 LPAR5Q9H1C0 372 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 SLC26A1Q9H2B4 701 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 SEC61A2Q9H9S3 476 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 CYTL1Q9NRR1 136 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 FAM212BQ9NTI7 297 aaPredicted RBP5.72□□□□□ -1.49
SNHG1-225ENST00000545920 DECR2Q9NUI1 292 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 SOHLH2Q9NX45 425 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 WSB2Q9NYS7 404 aaPredicted RBP5.72□□□□□ -1.49
SNHG1-225ENST00000545920 RCC2Q9P258 522 aaKnown RBP5.72□□□□□ -1.49
SNHG1-225ENST00000545920 FBXL7Q9UJT9 491 aa5.72□□□□□ -1.49
SNHG1-225ENST00000545920 C14orf166Q9Y224 244 aaKnown RBP5.72□□□□□ -1.49
SNHG1-225ENST00000545920 MRPS28Q9Y2Q9 187 aaKnown RBP5.72□□□□□ -1.49
SNHG1-225ENST00000545920 STRAPQ9Y3F4 350 aaKnown RBP5.72□□□□□ -1.49
SNHG1-225ENST00000545920 A0A087WV48 116 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 BORCS7-ASMTA0A0B4J1R7 106 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 A0A1B0GX78 115 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 MEIS3P1A6NDR6 274 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 LIPT2A6NK58 231 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 C4orf47A7E2U8 309 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 ZNF705EA8MWA4 302 aaPredicted RBP5.71□□□□□ -1.5
SNHG1-225ENST00000545920 FAM25EA8MYX2 175 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 B4DGG1 531 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 EEF1E1-BLOC1S5C9J1V9 151 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 PRSS44E7EML9 344 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 LMO7DNF2Z398 122 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 H3BMH7 237 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 P2RY10O00398 339 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 MBTPS2O43462 519 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 SSX5O60225 188 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 CDC14BO60729 498 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 ZNF354AO60765 605 aaPredicted RBP5.71□□□□□ -1.5
SNHG1-225ENST00000545920 IFNA2P01563 188 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 MT-ND4LP03901 98 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 S100A9P06702 114 aaKnown RBP5.71□□□□□ -1.5
SNHG1-225ENST00000545920 CTSDP07339 412 aaPredicted RBP5.71□□□□□ -1.5
SNHG1-225ENST00000545920 SEC11BP0C7V7 166 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 GIMD1P0DJR0 217 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 AKR1C4P17516 323 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 AMY2BP19961 511 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 CPT2P23786 658 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 DTYMKP23919 212 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 RBMXP38159 391 aaKnown RBP5.71□□□□□ -1.5
SNHG1-225ENST00000545920 EIF1P41567 113 aaKnown RBP5.71□□□□□ -1.5
SNHG1-225ENST00000545920 MEOX2P50222 304 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 UCP2P55851 309 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 RAB1AP62820 205 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 RPL11P62913 178 aaKnown RBP5.71□□□□□ -1.5
SNHG1-225ENST00000545920 HTRA3P83110 453 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 PEA15Q15121 130 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 ODF4Q2M2E3 257 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 ZNF528Q3MIS6 628 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 MOGAT2Q3SYC2 334 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 FAM76BQ5HYJ3 339 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 FAM74A1Q5RGS3 127 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 BTNL8Q6UX41 500 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 KCTD9Q7L273 389 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 SLC16A14Q7RTX9 510 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 TMEM200AQ86VY9 491 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 ANGPTL5Q86XS5 388 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 LURAP1LQ8IV03 231 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 SPACA3Q8IXA5 215 aa5.71□□□□□ -1.5
SNHG1-225ENST00000545920 ZNF101Q8IZC7 436 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms