RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 MAS1P04201 325 aa14.74□□□□□ -0.05
COPS3-212ENST00000539941 COX5BP10606 129 aa14.74□□□□□ -0.05
COPS3-212ENST00000539941 CD37P11049 281 aa14.74□□□□□ -0.05
COPS3-212ENST00000539941 ARSBP15848 533 aa14.74□□□□□ -0.05
COPS3-212ENST00000539941 HTR5AP47898 357 aa14.74□□□□□ -0.05
COPS3-212ENST00000539941 CXADRP78310 365 aa14.74□□□□□ -0.05
COPS3-212ENST00000539941 TSC22D1Q15714 1073 aa14.74□□□□□ -0.05
COPS3-212ENST00000539941 ANKRD16Q6P6B7 361 aa14.74□□□□□ -0.05
COPS3-212ENST00000539941 SERPINA12Q8IW75 414 aa14.74□□□□□ -0.05
COPS3-212ENST00000539941 NKAIN3Q8N8D7 197 aa14.74□□□□□ -0.05
COPS3-212ENST00000539941 PLPP7Q8NBV4 271 aa14.74□□□□□ -0.05
COPS3-212ENST00000539941 GPR84Q9NQS5 396 aa14.74□□□□□ -0.05
COPS3-212ENST00000539941 TAS2R4Q9NYW5 299 aa14.74□□□□□ -0.05
COPS3-212ENST00000539941 ETV7Q9Y603 341 aa14.74□□□□□ -0.05
COPS3-212ENST00000539941 WDR1O75083 606 aa14.73□□□□□ -0.05
COPS3-212ENST00000539941 ELK1P19419 428 aa14.73□□□□□ -0.05
COPS3-212ENST00000539941 AZGP1P25311 298 aaKnown RBP14.73□□□□□ -0.05
COPS3-212ENST00000539941 ARR3P36575 388 aa14.73□□□□□ -0.05
COPS3-212ENST00000539941 FLI1Q01543 452 aaPredicted RBP14.73□□□□□ -0.05
COPS3-212ENST00000539941 HES5Q5TA89 166 aa14.73□□□□□ -0.05
COPS3-212ENST00000539941 GLT8D1Q68CQ7 371 aa14.73□□□□□ -0.05
COPS3-212ENST00000539941 TFAP2EQ6VUC0 442 aa14.73□□□□□ -0.05
COPS3-212ENST00000539941 Q6ZSR3 168 aa14.73□□□□□ -0.05
COPS3-212ENST00000539941 OR6K3Q8NGY3 331 aa14.73□□□□□ -0.05
COPS3-212ENST00000539941 AKR7LQ8NHP1 331 aa14.73□□□□□ -0.05
COPS3-212ENST00000539941 FGFBP3Q8TAT2 258 aa14.73□□□□□ -0.05
COPS3-212ENST00000539941 DACT3Q96B18 629 aaPredicted RBP14.73□□□□□ -0.05
COPS3-212ENST00000539941 OR10A2Q9H208 303 aa14.73□□□□□ -0.05
COPS3-212ENST00000539941 MCUBQ9NWR8 336 aa14.73□□□□□ -0.05
COPS3-212ENST00000539941 ZNF319Q9P2F9 582 aa14.73□□□□□ -0.05
COPS3-212ENST00000539941 TUBD1Q9UJT1 453 aa14.73□□□□□ -0.05
COPS3-212ENST00000539941 ATRXP46100 2492 aa14.73□□□□□ -0.05
COPS3-212ENST00000539941 KALRNO60229 2985 aa14.72□□□□□ -0.05
COPS3-212ENST00000539941 MBD3L4A6NDZ8 208 aaPredicted RBP14.72□□□□□ -0.05
COPS3-212ENST00000539941 MBD3L3A6NE82 208 aaPredicted RBP14.72□□□□□ -0.05
COPS3-212ENST00000539941 MBD3L5A6NJ08 208 aaPredicted RBP14.72□□□□□ -0.05
COPS3-212ENST00000539941 PAHP00439 452 aa14.72□□□□□ -0.05
COPS3-212ENST00000539941 SNRPBP14678 240 aaKnown RBP14.72□□□□□ -0.05
COPS3-212ENST00000539941 EIF2S3LQ2VIR3 472 aaKnown RBP14.72□□□□□ -0.05
COPS3-212ENST00000539941 PABPC1L2AQ5JQF8 200 aa14.72□□□□□ -0.05
COPS3-212ENST00000539941 UBE2NLQ5JXB2 153 aa14.72□□□□□ -0.05
COPS3-212ENST00000539941 ZNF324BQ6AW86 544 aaPredicted RBP14.72□□□□□ -0.05
COPS3-212ENST00000539941 COMMD2Q86X83 199 aa14.72□□□□□ -0.05
COPS3-212ENST00000539941 C9orf106Q8NAJ2 232 aa14.72□□□□□ -0.05
COPS3-212ENST00000539941 OR5T2Q8NGG2 359 aa14.72□□□□□ -0.05
COPS3-212ENST00000539941 OR5D14Q8NGL3 314 aa14.72□□□□□ -0.05
COPS3-212ENST00000539941 OR1K1Q8NGR3 316 aa14.72□□□□□ -0.05
COPS3-212ENST00000539941 OR1J2Q8NGS2 313 aa14.72□□□□□ -0.05
COPS3-212ENST00000539941 MBD3L2Q8NHZ7 208 aaPredicted RBP14.72□□□□□ -0.05
COPS3-212ENST00000539941 LGALS14Q8TCE9 139 aa14.72□□□□□ -0.05
COPS3-212ENST00000539941 FGGYQ96C11 551 aa14.72□□□□□ -0.05
COPS3-212ENST00000539941 FOXRED1Q96CU9 486 aaPredicted RBP14.72□□□□□ -0.05
COPS3-212ENST00000539941 IFT46Q9NQC8 304 aa14.72□□□□□ -0.05
COPS3-212ENST00000539941 STEAP1Q9UHE8 339 aa14.72□□□□□ -0.05
COPS3-212ENST00000539941 ZNF391Q9UJN7 358 aa14.72□□□□□ -0.05
COPS3-212ENST00000539941 PRELID3BQ9Y3B1 194 aa14.72□□□□□ -0.05
COPS3-212ENST00000539941 RPS10-NUDT3A0A1W2PQS6 291 aa14.71□□□□□ -0.05
COPS3-212ENST00000539941 SLC17A2O00624 439 aa14.71□□□□□ -0.05
COPS3-212ENST00000539941 LYRM1O43325 122 aa14.71□□□□□ -0.05
COPS3-212ENST00000539941 UBL3O95164 117 aa14.71□□□□□ -0.05
COPS3-212ENST00000539941 IL18BPO95998 194 aa14.71□□□□□ -0.05
COPS3-212ENST00000539941 EIF4EP06730 217 aaKnown RBP14.71□□□□□ -0.05
COPS3-212ENST00000539941 CRHP06850 196 aa14.71□□□□□ -0.05
COPS3-212ENST00000539941 ITGA5P08648 1049 aa14.71□□□□□ -0.05
COPS3-212ENST00000539941 DBHP09172 617 aa14.71□□□□□ -0.05
COPS3-212ENST00000539941 PATE4P0C8F1 98 aa14.71□□□□□ -0.05
COPS3-212ENST00000539941 ZNF250P15622 560 aa14.71□□□□□ -0.05
COPS3-212ENST00000539941 ZNF20P17024 532 aa14.71□□□□□ -0.05
COPS3-212ENST00000539941 FOXG1P55316 489 aaPredicted RBP14.71□□□□□ -0.05
COPS3-212ENST00000539941 TGFBR3Q03167 851 aa14.71□□□□□ -0.05
COPS3-212ENST00000539941 C9orf135Q5VTT2 229 aa14.71□□□□□ -0.05
COPS3-212ENST00000539941 ZNF529Q6P280 563 aa14.71□□□□□ -0.05
COPS3-212ENST00000539941 ZNF585AQ6P3V2 769 aa14.71□□□□□ -0.05
COPS3-212ENST00000539941 PCSK4Q6UW60 755 aa14.71□□□□□ -0.05
COPS3-212ENST00000539941 PGAP1Q75T13 922 aa14.71□□□□□ -0.05
COPS3-212ENST00000539941 NANOS1Q8WY41 292 aaKnown RBP14.71□□□□□ -0.05
COPS3-212ENST00000539941 BCL2L2Q92843 193 aaPredicted RBP14.71□□□□□ -0.05
COPS3-212ENST00000539941 C10orf35Q96D05 121 aa14.71□□□□□ -0.05
COPS3-212ENST00000539941 PPP1R3EQ9H7J1 279 aa14.71□□□□□ -0.05
COPS3-212ENST00000539941 EXTL2Q9UBQ6 330 aa14.71□□□□□ -0.05
COPS3-212ENST00000539941 MAB21L2Q9Y586 359 aa14.71□□□□□ -0.05
COPS3-212ENST00000539941 LINC00854A0A1B0GVQ3 168 aa14.71□□□□□ -0.06
COPS3-212ENST00000539941 LOC390937A0A1W2PQ73 354 aa14.71□□□□□ -0.06
COPS3-212ENST00000539941 FIGNL2A6NMB9 653 aa14.71□□□□□ -0.06
COPS3-212ENST00000539941 DHRS7CA6NNS2 312 aa14.71□□□□□ -0.06
COPS3-212ENST00000539941 INMT-MINDY4F8WBC2 141 aa14.71□□□□□ -0.06
COPS3-212ENST00000539941 TSC22D2O75157 780 aa14.71□□□□□ -0.06
COPS3-212ENST00000539941 DHRS3O75911 302 aa14.71□□□□□ -0.06
COPS3-212ENST00000539941 FAM157BP0CG42 384 aa14.71□□□□□ -0.06
COPS3-212ENST00000539941 INPP1P49441 399 aa14.71□□□□□ -0.06
COPS3-212ENST00000539941 ZNF273Q14593 569 aa14.71□□□□□ -0.06
COPS3-212ENST00000539941 BAIAP2L2Q6UXY1 529 aa14.71□□□□□ -0.06
COPS3-212ENST00000539941 NAA40Q86UY6 237 aa14.71□□□□□ -0.06
COPS3-212ENST00000539941 CCDC36Q8IYA8 594 aa14.71□□□□□ -0.06
COPS3-212ENST00000539941 GCNT2Q8N0V5 402 aa14.71□□□□□ -0.06
COPS3-212ENST00000539941 DNAAF1Q8NEP3 725 aa14.71□□□□□ -0.06
COPS3-212ENST00000539941 OR14K1Q8NGZ2 314 aa14.71□□□□□ -0.06
COPS3-212ENST00000539941 ADAT3Q96EY9 351 aaPredicted RBP14.71□□□□□ -0.06
COPS3-212ENST00000539941 DOCK7Q96N67 2140 aa14.71□□□□□ -0.06
COPS3-212ENST00000539941 MED28Q9H204 178 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms