RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 MADCAM1Q13477 382 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 EBPQ15125 230 aaKnown RBP0.7□□□□□ -2.3
HIF1A-204ENST00000539097 TGFBIQ15582 683 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 TTLL9Q3SXZ7 439 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 OR52E8Q6IFG1 317 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 REEP3Q6NUK4 255 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 SPNS3Q6ZMD2 512 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 CBLN2Q8IUK8 224 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 TMEM61Q8N0U2 210 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 CD177Q8N6Q3 437 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 LRRC75AQ8NAA5 344 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 OR1M1Q8NGA1 313 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 OR9G4Q8NGQ1 327 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 OR1S2Q8NGQ3 325 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 OR10R2Q8NGX6 335 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 OR10J6PQ8NGY7 276 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 OR52E5Q8NH55 327 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 PLPPR1Q8TBJ4 325 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 UFD1Q92890 307 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 IL22RA2Q969J5 263 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 NEIL2Q969S2 332 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 RAD51AP1Q96B01 352 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 MED8Q96G25 268 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 PGLYRP4Q96LB8 373 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 OR2M2Q96R28 347 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 ULBP2Q9BZM5 246 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 API5Q9BZZ5 524 aaKnown RBP0.7□□□□□ -2.3
HIF1A-204ENST00000539097 BLZF1Q9H2G9 400 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 IFI27L2Q9H2X8 130 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 OR51B5Q9H339 312 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF226Q9NYT6 803 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF107Q9UII5 783 aaPredicted RBP0.7□□□□□ -2.3
HIF1A-204ENST00000539097 FBXL3Q9UKT7 428 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 TMEM14AQ9Y6G1 99 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 MYO16Q9Y6X6 1858 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 MYO3AQ8NEV4 1616 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 ABCA8O94911 1581 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 USP24Q9UPU5 2620 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 YLPM1P49750 1951 aaKnown RBP0.7□□□□□ -2.3
HIF1A-204ENST00000539097 DYSFO75923 2080 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 EP400Q96L91 3159 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 KNDC1Q76NI1 1749 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 IGLV4-60A0A075B6I1 120 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 IGKV3D-15A0A087WSY6 115 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 KLF18A0A0U1RQI7 1052 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 A0A1W2PQ67 120 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 GOLGA8JA6NMD2 632 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 EFCAB7A8K855 629 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 F8VP50 259 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 UBDO15205 165 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 CLOCKO15516 846 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 AIREO43918 545 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF861PO60384 105 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 FADS1O60427 444 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 NPIPB7O75200 414 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 MMP1P03956 469 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 GOLGA8HP0CJ92 632 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 PTHLHP12272 177 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 NQO2P16083 231 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 RCC1P18754 421 aaPredicted RBP0.7□□□□□ -2.3
HIF1A-204ENST00000539097 GDF1P27539 372 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 FUSP35637 526 aaKnown RBP eCLIP0.7□□□□□ -2.3
HIF1A-204ENST00000539097 CBX5P45973 191 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 NCBP2P52298 156 aaKnown RBP eCLIP0.7□□□□□ -2.3
HIF1A-204ENST00000539097 ACLYP53396 1101 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 UCNP55089 124 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 RBX1P62877 108 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF726P1Q15940 193 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 SP6Q3SY56 376 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 RBM48Q5RL73 367 aaKnown RBP0.7□□□□□ -2.3
HIF1A-204ENST00000539097 MBOAT2Q6ZWT7 520 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 DCXRQ7Z4W1 244 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 LUZP2Q86TE4 346 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 SLC25A42Q86VD7 318 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 PCP2Q8IVA1 136 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 SLC35F2Q8IXU6 374 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 SELENOHQ8IZQ5 122 aaKnown RBP0.7□□□□□ -2.3
HIF1A-204ENST00000539097 C20orf203Q8NBC4 194 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 FANK1Q8TC84 345 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 SRSF12Q8WXF0 261 aaKnown RBP0.7□□□□□ -2.3
HIF1A-204ENST00000539097 GTF2H4Q92759 462 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 FAM19A4Q96LR4 140 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 PRRT1Q99946 306 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 BEX2Q9BXY8 128 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 YTHDF1Q9BYJ9 559 aaKnown RBP0.7□□□□□ -2.3
HIF1A-204ENST00000539097 BCL2L14Q9BZR8 327 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 ROGDIQ9GZN7 287 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 NAA50Q9GZZ1 169 aaKnown RBP0.7□□□□□ -2.3
HIF1A-204ENST00000539097 RBKSQ9H477 322 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 SLC25A22Q9H936 323 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 CCNB1IP1Q9NPC3 277 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 AGPAT3Q9NRZ7 376 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 NECAP2Q9NVZ3 263 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 BFARQ9NZS9 450 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 MTRF1LQ9UGC7 380 aaKnown RBP0.7□□□□□ -2.3
HIF1A-204ENST00000539097 ATP6V1DQ9Y5K8 247 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 PHIPQ8WWQ0 1821 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 NRKQ7Z2Y5 1582 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 THSD7AQ9UPZ6 1657 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 DLC1Q96QB1 1528 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms