RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 UBE2V2Q15819 145 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 PNLIPRP3Q17RR3 467 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 TMEM42Q69YG0 159 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 SFRP4Q6FHJ7 346 aaPredicted RBP11.67□□□□□ -0.54
BEST1-208ENST00000534553 RTL6Q6ICC9 239 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 OR10K2Q6IF99 312 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 STEAP1BQ6NZ63 245 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 Q6ZTK2 550 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 LHFPL2Q6ZUX7 228 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 ZNF584Q8IVC4 421 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 CCDC36Q8IYA8 594 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 ACBD4Q8NC06 268 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 OR4C16Q8NGL9 310 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 GIMAP1Q8WWP7 306 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 C1orf147Q96MC9 270 aaPredicted RBP11.67□□□□□ -0.54
BEST1-208ENST00000534553 OR51J1Q9H342 316 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 GPN1Q9HCN4 374 aaPredicted RBP11.67□□□□□ -0.54
BEST1-208ENST00000534553 PLSCR2Q9NRY7 297 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 CSAG2Q9Y5P2 127 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 hCG_38984A0A1B0GV85 526 aa11.66□□□□□ -0.54
BEST1-208ENST00000534553 J3QW42 95 aa11.66□□□□□ -0.54
BEST1-208ENST00000534553 ICMTO60725 284 aa11.66□□□□□ -0.54
BEST1-208ENST00000534553 ZNF780AO75290 641 aaPredicted RBP11.66□□□□□ -0.54
BEST1-208ENST00000534553 PATE4P0C8F1 98 aa11.66□□□□□ -0.54
BEST1-208ENST00000534553 ANOS1P23352 680 aa11.66□□□□□ -0.54
BEST1-208ENST00000534553 TGFBR3Q03167 851 aa11.66□□□□□ -0.54
BEST1-208ENST00000534553 C3AR1Q16581 482 aa11.66□□□□□ -0.54
BEST1-208ENST00000534553 ZNF782Q6ZMW2 699 aaPredicted RBP11.66□□□□□ -0.54
BEST1-208ENST00000534553 NUFIP2Q7Z417 695 aaKnown RBP11.66□□□□□ -0.54
BEST1-208ENST00000534553 GABRG1Q8N1C3 465 aa11.66□□□□□ -0.54
BEST1-208ENST00000534553 FTMTQ8N4E7 242 aa11.66□□□□□ -0.54
BEST1-208ENST00000534553 FGFBP3Q8TAT2 258 aa11.66□□□□□ -0.54
BEST1-208ENST00000534553 NKX3-1Q99801 234 aaPredicted RBP11.66□□□□□ -0.54
BEST1-208ENST00000534553 SLC25A21Q9BQT8 299 aaPredicted RBP11.66□□□□□ -0.54
BEST1-208ENST00000534553 LPAR5Q9H1C0 372 aa11.66□□□□□ -0.54
BEST1-208ENST00000534553 NOX3Q9HBY0 568 aa11.66□□□□□ -0.54
BEST1-208ENST00000534553 PCDHB16Q9NRJ7 776 aa11.66□□□□□ -0.54
BEST1-208ENST00000534553 CLCF1Q9UBD9 225 aa11.66□□□□□ -0.54
BEST1-208ENST00000534553 ZNF292O60281 2723 aa11.66□□□□□ -0.54
BEST1-208ENST00000534553 ZNF816-ZNF321PA0A0X1KG74 233 aa11.65□□□□□ -0.54
BEST1-208ENST00000534553 C5orf63A6NC05 138 aa11.65□□□□□ -0.54
BEST1-208ENST00000534553 OR14I1A6ND48 311 aa11.65□□□□□ -0.54
BEST1-208ENST00000534553 MPIG6BO95866 241 aa11.65□□□□□ -0.54
BEST1-208ENST00000534553 CD74P04233 296 aa11.65□□□□□ -0.54
BEST1-208ENST00000534553 IL5P05113 134 aa11.65□□□□□ -0.54
BEST1-208ENST00000534553 CPT2P23786 658 aa11.65□□□□□ -0.54
BEST1-208ENST00000534553 CBX5P45973 191 aa11.65□□□□□ -0.54
BEST1-208ENST00000534553 RBP2P50120 134 aa11.65□□□□□ -0.54
BEST1-208ENST00000534553 CD83Q01151 205 aa11.65□□□□□ -0.54
BEST1-208ENST00000534553 GUCA2AQ02747 115 aa11.65□□□□□ -0.54
BEST1-208ENST00000534553 HGFACQ04756 655 aa11.65□□□□□ -0.54
BEST1-208ENST00000534553 MALLQ13021 153 aa11.65□□□□□ -0.54
BEST1-208ENST00000534553 ZNF169Q14929 603 aaPredicted RBP11.65□□□□□ -0.54
BEST1-208ENST00000534553 LINC00303Q3SY05 128 aa11.65□□□□□ -0.54
BEST1-208ENST00000534553 MOGAT2Q3SYC2 334 aa11.65□□□□□ -0.54
BEST1-208ENST00000534553 CDNFQ49AH0 187 aa11.65□□□□□ -0.54
BEST1-208ENST00000534553 OR2A2Q6IF42 318 aa11.65□□□□□ -0.54
BEST1-208ENST00000534553 LIX1LQ8IVB5 337 aa11.65□□□□□ -0.54
BEST1-208ENST00000534553 CHST4Q8NCG5 386 aa11.65□□□□□ -0.54
BEST1-208ENST00000534553 TNFAIP8L1Q8WVP5 186 aa11.65□□□□□ -0.54
BEST1-208ENST00000534553 APOBEC3DQ96AK3 386 aaPredicted RBP11.65□□□□□ -0.54
BEST1-208ENST00000534553 RAB3CQ96E17 227 aa11.65□□□□□ -0.54
BEST1-208ENST00000534553 RANGRFQ9HD47 186 aaPredicted RBP11.65□□□□□ -0.54
BEST1-208ENST00000534553 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.65□□□□□ -0.54
BEST1-208ENST00000534553 KCNN3Q9UGI6 736 aa11.65□□□□□ -0.54
BEST1-208ENST00000534553 SCP2D1Q9UJQ7 156 aa11.65□□□□□ -0.54
BEST1-208ENST00000534553 PAIP2BQ9ULR5 123 aaKnown RBP11.65□□□□□ -0.54
BEST1-208ENST00000534553 SLC7A11Q9UPY5 501 aa11.65□□□□□ -0.54
BEST1-208ENST00000534553 SNRPGP15A8MWD9 76 aa11.65□□□□□ -0.55
BEST1-208ENST00000534553 ZNF736B4DX44 427 aaPredicted RBP11.65□□□□□ -0.55
BEST1-208ENST00000534553 CRTAPO75718 401 aaPredicted RBP11.65□□□□□ -0.55
BEST1-208ENST00000534553 ERP29P30040 261 aaKnown RBP11.65□□□□□ -0.55
BEST1-208ENST00000534553 VEGFCP49767 419 aa11.65□□□□□ -0.55
BEST1-208ENST00000534553 FUT6P51993 359 aa11.65□□□□□ -0.55
BEST1-208ENST00000534553 RAB1AP62820 205 aa11.65□□□□□ -0.55
BEST1-208ENST00000534553 RPS27AP62979 156 aaKnown RBP11.65□□□□□ -0.55
BEST1-208ENST00000534553 FAM3AP98173 230 aa11.65□□□□□ -0.55
BEST1-208ENST00000534553 PMP22Q01453 160 aa11.65□□□□□ -0.55
BEST1-208ENST00000534553 PPA1Q15181 289 aa11.65□□□□□ -0.55
BEST1-208ENST00000534553 ASCL5Q7RTU5 278 aa11.65□□□□□ -0.55
BEST1-208ENST00000534553 NOXA1Q86UR1 476 aa11.65□□□□□ -0.55
BEST1-208ENST00000534553 FAM89BQ8N5H3 189 aa11.65□□□□□ -0.55
BEST1-208ENST00000534553 CPEB3Q8NE35 698 aaKnown RBP11.65□□□□□ -0.55
BEST1-208ENST00000534553 OR1K1Q8NGR3 316 aa11.65□□□□□ -0.55
BEST1-208ENST00000534553 OR2AE1Q8NHA4 323 aa11.65□□□□□ -0.55
BEST1-208ENST00000534553 BORCS8Q96FH0 119 aa11.65□□□□□ -0.55
BEST1-208ENST00000534553 POM121Q96HA1 1249 aa11.65□□□□□ -0.55
BEST1-208ENST00000534553 SPACA5Q96QH8 159 aa11.65□□□□□ -0.55
BEST1-208ENST00000534553 TM2D1Q9BX74 207 aa11.65□□□□□ -0.55
BEST1-208ENST00000534553 PTTG3PQ9NZH4 202 aa11.65□□□□□ -0.55
BEST1-208ENST00000534553 MYEF2Q9P2K5 600 aaKnown RBP11.65□□□□□ -0.55
BEST1-208ENST00000534553 TMEM235A6NFC5 223 aa11.64□□□□□ -0.55
BEST1-208ENST00000534553 AHRRA9YTQ3 701 aa11.64□□□□□ -0.55
BEST1-208ENST00000534553 CA11O75493 328 aa11.64□□□□□ -0.55
BEST1-208ENST00000534553 RAB3DO95716 219 aa11.64□□□□□ -0.55
BEST1-208ENST00000534553 NRASP01111 189 aa11.64□□□□□ -0.55
BEST1-208ENST00000534553 C1QBP02746 253 aa11.64□□□□□ -0.55
BEST1-208ENST00000534553 CD3DP04234 171 aa11.64□□□□□ -0.55
BEST1-208ENST00000534553 CD79AP11912 226 aa11.64□□□□□ -0.55
BEST1-208ENST00000534553 HOXB1P14653 301 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms