RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 OR8B2Q96RD0 313 aa8.73□□□□□ -1.01
CPSF1-203ENST00000527916 INTS14Q96SY0 518 aa8.73□□□□□ -1.01
CPSF1-203ENST00000527916 ABHD6Q9BV23 337 aa8.73□□□□□ -1.01
CPSF1-203ENST00000527916 ZNF556Q9HAH1 456 aa8.73□□□□□ -1.01
CPSF1-203ENST00000527916 RNF7Q9UBF6 113 aa8.73□□□□□ -1.01
CPSF1-203ENST00000527916 TET2Q6N021 2002 aaPredicted RBP8.73□□□□□ -1.01
CPSF1-203ENST00000527916 COL7A1Q02388 2944 aa8.72□□□□□ -1.01
CPSF1-203ENST00000527916 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.72□□□□□ -1.01
CPSF1-203ENST00000527916 IGHV3-64DA0A0J9YX35 117 aa8.72□□□□□ -1.01
CPSF1-203ENST00000527916 TCRBV3S1A0A5B6 114 aa8.72□□□□□ -1.01
CPSF1-203ENST00000527916 FAM183AA6NL82 134 aa8.72□□□□□ -1.01
CPSF1-203ENST00000527916 PRR23D1E9PI22 279 aaPredicted RBP8.72□□□□□ -1.01
CPSF1-203ENST00000527916 PHYHO14832 338 aa8.72□□□□□ -1.01
CPSF1-203ENST00000527916 TNFRSF13BO14836 293 aaPredicted RBP8.72□□□□□ -1.01
CPSF1-203ENST00000527916 PRODHO43272 600 aa8.72□□□□□ -1.01
CPSF1-203ENST00000527916 GPR137BO60478 399 aa8.72□□□□□ -1.01
CPSF1-203ENST00000527916 ZNF205O95201 554 aa8.72□□□□□ -1.01
CPSF1-203ENST00000527916 PRB2P02812 416 aaPredicted RBP8.72□□□□□ -1.01
CPSF1-203ENST00000527916 PRR23D2P0DMB1 279 aaPredicted RBP8.72□□□□□ -1.01
CPSF1-203ENST00000527916 HSD11B1P28845 292 aa8.72□□□□□ -1.01
CPSF1-203ENST00000527916 PRSS12P56730 875 aa8.72□□□□□ -1.01
CPSF1-203ENST00000527916 FAM3AP98173 230 aa8.72□□□□□ -1.01
CPSF1-203ENST00000527916 EIF2B1Q14232 305 aaKnown RBP8.72□□□□□ -1.01
CPSF1-203ENST00000527916 GINS1Q14691 196 aa8.72□□□□□ -1.01
CPSF1-203ENST00000527916 SNCBQ16143 134 aa8.72□□□□□ -1.01
CPSF1-203ENST00000527916 C11orf91Q3C1V1 193 aa8.72□□□□□ -1.01
CPSF1-203ENST00000527916 SLC35D3Q5M8T2 416 aa8.72□□□□□ -1.01
CPSF1-203ENST00000527916 FAM201AQ5SY85 155 aa8.72□□□□□ -1.01
CPSF1-203ENST00000527916 SAMD5Q5TGI4 173 aa8.72□□□□□ -1.01
CPSF1-203ENST00000527916 PRAMEF6Q5VXH4 476 aa8.72□□□□□ -1.01
CPSF1-203ENST00000527916 DPY19L4Q7Z388 723 aa8.72□□□□□ -1.01
CPSF1-203ENST00000527916 ERI1Q8IV48 349 aaKnown RBP8.72□□□□□ -1.01
CPSF1-203ENST00000527916 ZNF454Q8N9F8 522 aa8.72□□□□□ -1.01
CPSF1-203ENST00000527916 OR6N2Q8NGY6 317 aa8.72□□□□□ -1.01
CPSF1-203ENST00000527916 BCAS4Q8TDM0 211 aa8.72□□□□□ -1.01
CPSF1-203ENST00000527916 DNAJC9Q8WXX5 260 aa8.72□□□□□ -1.01
CPSF1-203ENST00000527916 ITFG2Q969R8 447 aa8.72□□□□□ -1.01
CPSF1-203ENST00000527916 PPP1R14AQ96A00 147 aa8.72□□□□□ -1.01
CPSF1-203ENST00000527916 SGK3Q96BR1 496 aa8.72□□□□□ -1.01
CPSF1-203ENST00000527916 SLC7A6OSQ96CW6 309 aaPredicted RBP8.72□□□□□ -1.01
CPSF1-203ENST00000527916 NRBF2Q96F24 287 aa8.72□□□□□ -1.01
CPSF1-203ENST00000527916 ADAT1Q9BUB4 502 aaKnown RBP8.72□□□□□ -1.01
CPSF1-203ENST00000527916 RGCCQ9H4X1 137 aa8.72□□□□□ -1.01
CPSF1-203ENST00000527916 C14orf119Q9NWQ9 140 aa8.72□□□□□ -1.01
CPSF1-203ENST00000527916 DNAJB9Q9UBS3 223 aa8.72□□□□□ -1.01
CPSF1-203ENST00000527916 CLN8Q9UBY8 286 aa8.72□□□□□ -1.01
CPSF1-203ENST00000527916 TRAV38-1A0A0B4J264 116 aa8.71□□□□□ -1.02
CPSF1-203ENST00000527916 ANKRD30BLA7E2S9 258 aa8.71□□□□□ -1.02
CPSF1-203ENST00000527916 LGALS8O00214 317 aa8.71□□□□□ -1.02
CPSF1-203ENST00000527916 TIPRLO75663 272 aa8.71□□□□□ -1.02
CPSF1-203ENST00000527916 DNAJC8O75937 253 aaPredicted RBP8.71□□□□□ -1.02
CPSF1-203ENST00000527916 LHBP01229 141 aa8.71□□□□□ -1.02
CPSF1-203ENST00000527916 OPN1MWP04001 364 aa8.71□□□□□ -1.02
CPSF1-203ENST00000527916 LIPFP07098 398 aa8.71□□□□□ -1.02
CPSF1-203ENST00000527916 OPN1MW2P0DN77 364 aa8.71□□□□□ -1.02
CPSF1-203ENST00000527916 OPN1MW3P0DN78 364 aa8.71□□□□□ -1.02
CPSF1-203ENST00000527916 SLC2A1P11166 492 aa8.71□□□□□ -1.02
CPSF1-203ENST00000527916 ANOS1P23352 680 aa8.71□□□□□ -1.02
CPSF1-203ENST00000527916 CFHR2P36980 270 aa8.71□□□□□ -1.02
CPSF1-203ENST00000527916 OPRL1P41146 370 aa8.71□□□□□ -1.02
CPSF1-203ENST00000527916 PITPNBP48739 271 aa8.71□□□□□ -1.02
CPSF1-203ENST00000527916 CX3CR1P49238 355 aa8.71□□□□□ -1.02
CPSF1-203ENST00000527916 FGF12P61328 243 aa8.71□□□□□ -1.02
CPSF1-203ENST00000527916 FLOT2Q14254 428 aa8.71□□□□□ -1.02
CPSF1-203ENST00000527916 CD276Q5ZPR3 534 aa8.71□□□□□ -1.02
CPSF1-203ENST00000527916 WDR25Q64LD2 544 aaPredicted RBP8.71□□□□□ -1.02
CPSF1-203ENST00000527916 LYPD2Q6UXB3 125 aa8.71□□□□□ -1.02
CPSF1-203ENST00000527916 GDPGP1Q6ZNW5 385 aa8.71□□□□□ -1.02
CPSF1-203ENST00000527916 SLC16A9Q7RTY1 509 aa8.71□□□□□ -1.02
CPSF1-203ENST00000527916 CSNK2A3Q8NEV1 391 aa8.71□□□□□ -1.02
CPSF1-203ENST00000527916 OR56B2PQ8NGI1 322 aa8.71□□□□□ -1.02
CPSF1-203ENST00000527916 OTOSQ8NHW6 89 aa8.71□□□□□ -1.02
CPSF1-203ENST00000527916 NUDT16L1Q9BRJ7 211 aaKnown RBP8.71□□□□□ -1.02
CPSF1-203ENST00000527916 TEX12Q9BXU0 123 aa8.71□□□□□ -1.02
CPSF1-203ENST00000527916 OR10A2Q9H208 303 aa8.71□□□□□ -1.02
CPSF1-203ENST00000527916 OR51V1Q9H2C8 321 aa8.71□□□□□ -1.02
CPSF1-203ENST00000527916 MED20Q9H944 212 aa8.71□□□□□ -1.02
CPSF1-203ENST00000527916 RNPEPL1Q9HAU8 725 aa8.71□□□□□ -1.02
CPSF1-203ENST00000527916 SLC25A19Q9HC21 320 aa8.71□□□□□ -1.02
CPSF1-203ENST00000527916 UFSP2Q9NUQ7 469 aa8.71□□□□□ -1.02
CPSF1-203ENST00000527916 KAAG1Q9UBP8 84 aa8.71□□□□□ -1.02
CPSF1-203ENST00000527916 POMPQ9Y244 141 aa8.71□□□□□ -1.02
CPSF1-203ENST00000527916 hCG_38984A0A1B0GV85 526 aa8.7□□□□□ -1.02
CPSF1-203ENST00000527916 TBX1O43435 398 aa8.7□□□□□ -1.02
CPSF1-203ENST00000527916 FKBP6O75344 327 aa8.7□□□□□ -1.02
CPSF1-203ENST00000527916 E2F6O75461 281 aa8.7□□□□□ -1.02
CPSF1-203ENST00000527916 ANXA2P07355 339 aaKnown RBP8.7□□□□□ -1.02
CPSF1-203ENST00000527916 LYNP07948 512 aa8.7□□□□□ -1.02
CPSF1-203ENST00000527916 H2BFMP0C1H6 154 aa8.7□□□□□ -1.02
CPSF1-203ENST00000527916 PRKACGP22612 351 aa8.7□□□□□ -1.02
CPSF1-203ENST00000527916 POU1F1P28069 291 aa8.7□□□□□ -1.02
CPSF1-203ENST00000527916 ZNF121P58317 390 aaPredicted RBP8.7□□□□□ -1.02
CPSF1-203ENST00000527916 CBX1P83916 185 aa8.7□□□□□ -1.02
CPSF1-203ENST00000527916 TIGD6Q17RP2 521 aa8.7□□□□□ -1.02
CPSF1-203ENST00000527916 TEX36Q5VZQ5 186 aa8.7□□□□□ -1.02
CPSF1-203ENST00000527916 PLBD1Q6P4A8 553 aa8.7□□□□□ -1.02
CPSF1-203ENST00000527916 DEGS2Q6QHC5 323 aa8.7□□□□□ -1.02
CPSF1-203ENST00000527916 KRT74Q7RTS7 529 aa8.7□□□□□ -1.02
CPSF1-203ENST00000527916 SPATA24Q86W54 205 aa8.7□□□□□ -1.02
CPSF1-203ENST00000527916 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms