RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 EVX1P49640 407 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 MMP15P51511 669 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 NANOS3P60323 173 aaKnown RBP9.21□□□□□ -0.94
NEDD8-204ENST00000526430 PSMA6P60900 246 aaKnown RBP9.21□□□□□ -0.94
NEDD8-204ENST00000526430 SPRNQ5BIV9 151 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 OR2G6Q5TZ20 316 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 XAF1Q6GPH4 301 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 RGS7BPQ6MZT1 257 aaPredicted RBP9.21□□□□□ -0.94
NEDD8-204ENST00000526430 FDX2Q6P4F2 183 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 Q6ZR03 302 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 Q6ZSR3 168 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 KRT77Q7Z794 578 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 ZCCHC24Q8N2G6 241 aaKnown RBP9.21□□□□□ -0.94
NEDD8-204ENST00000526430 PRSS35Q8N3Z0 413 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 ZNF283Q8N7M2 679 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 OR2AE1Q8NHA4 323 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 NANPQ8TBE9 248 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 RPS4Y2Q8TD47 263 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 IPCEF1Q8WWN9 437 aaPredicted RBP9.21□□□□□ -0.94
NEDD8-204ENST00000526430 SPTSSAQ969W0 71 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 CMBLQ96DG6 245 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 PELI1Q96FA3 418 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 TMEM80Q96HE8 168 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 KCNS3Q9BQ31 491 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 SYT3Q9BQG1 590 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 MROQ9BYG7 248 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 NIPAL2Q9H841 368 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 PTTG3PQ9NZH4 202 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 CNOT2Q9NZN8 540 aaKnown RBP9.21□□□□□ -0.94
NEDD8-204ENST00000526430 ERVK-18Q9QC07 812 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 EIF3KQ9UBQ5 218 aaKnown RBP9.21□□□□□ -0.94
NEDD8-204ENST00000526430 SLC22A13Q9Y226 551 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 MMP24Q9Y5R2 645 aa9.21□□□□□ -0.94
NEDD8-204ENST00000526430 SIRT4Q9Y6E7 314 aaPredicted RBP9.21□□□□□ -0.94
NEDD8-204ENST00000526430 PLXNB1O43157 2135 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 TMEM269A0A1B0GVZ9 245 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 ACOD1A6NK06 481 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 J3QLI3 93 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 M0QZ24 198 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 FSHBP01225 129 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 CDK1P06493 297 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 KITLGP21583 273 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 TUBG1P23258 451 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 FPR2P25090 351 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 PSMB10P40306 273 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 RGS6P49758 472 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 RIDAP52758 137 aaKnown RBP9.2□□□□□ -0.94
NEDD8-204ENST00000526430 FAM3AP98173 230 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 TAF13Q15543 124 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 ZNF718Q3SXZ3 478 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 RNLSQ5VYX0 342 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 AHSA2Q719I0 299 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 FAM57BQ71RH2 274 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 KRT74Q7RTS7 529 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 CATSPERDQ86XM0 798 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 EGFL6Q8IUX8 553 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 ELMOD2Q8IZ81 293 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 SYS1Q8N2H4 156 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 OR8B12Q8NGG6 310 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 SYNPRQ8TBG9 265 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 ALG8Q9BVK2 526 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 TMPRSS13Q9BYE2 586 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 PPP1R3EQ9H7J1 279 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 LPAR2Q9HBW0 351 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 BRD7Q9NPI1 651 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 TUBG2Q9NRH3 451 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 INPP5EQ9NRR6 644 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 ACOXLQ9NUZ1 547 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 FRRS1LQ9P0K9 344 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 PURGQ9UJV8 347 aaKnown RBP9.2□□□□□ -0.94
NEDD8-204ENST00000526430 IKZF2Q9UKS7 526 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 LSM2Q9Y333 95 aaKnown RBP9.2□□□□□ -0.94
NEDD8-204ENST00000526430 CMAHPQ9Y471 501 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 R4GMQ9 66 aa9.2□□□□□ -0.94
NEDD8-204ENST00000526430 A0A0G2JMP0 313 aa9.19□□□□□ -0.94
NEDD8-204ENST00000526430 A0A0X1KG70 313 aa9.19□□□□□ -0.94
NEDD8-204ENST00000526430 EFCAB10A6NFE3 127 aa9.19□□□□□ -0.94
NEDD8-204ENST00000526430 PTGES3LE9PB15 166 aa9.19□□□□□ -0.94
NEDD8-204ENST00000526430 PIN1P1O15428 100 aa9.19□□□□□ -0.94
NEDD8-204ENST00000526430 RPP14O95059 124 aaKnown RBP9.19□□□□□ -0.94
NEDD8-204ENST00000526430 RNASE1P07998 156 aaKnown RBP9.19□□□□□ -0.94
NEDD8-204ENST00000526430 RAC2P15153 192 aa9.19□□□□□ -0.94
NEDD8-204ENST00000526430 ADRA2CP18825 462 aa9.19□□□□□ -0.94
NEDD8-204ENST00000526430 ACKR3P25106 362 aa9.19□□□□□ -0.94
NEDD8-204ENST00000526430 SLC6A9P48067 706 aa9.19□□□□□ -0.94
NEDD8-204ENST00000526430 GTF2A1P52655 376 aaPredicted RBP9.19□□□□□ -0.94
NEDD8-204ENST00000526430 CSNK2BP67870 215 aa9.19□□□□□ -0.94
NEDD8-204ENST00000526430 ACTC1P68032 377 aa9.19□□□□□ -0.94
NEDD8-204ENST00000526430 ACTA1P68133 377 aa9.19□□□□□ -0.94
NEDD8-204ENST00000526430 WDR38Q5JTN6 314 aa9.19□□□□□ -0.94
NEDD8-204ENST00000526430 OR2T2Q6IF00 324 aa9.19□□□□□ -0.94
NEDD8-204ENST00000526430 RBMS3Q6XE24 437 aaKnown RBP9.19□□□□□ -0.94
NEDD8-204ENST00000526430 DOK3Q7L591 496 aa9.19□□□□□ -0.94
NEDD8-204ENST00000526430 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.19□□□□□ -0.94
NEDD8-204ENST00000526430 C1orf174Q8IYL3 243 aa9.19□□□□□ -0.94
NEDD8-204ENST00000526430 NANOGP1Q8N7R0 232 aa9.19□□□□□ -0.94
NEDD8-204ENST00000526430 PLPP7Q8NBV4 271 aa9.19□□□□□ -0.94
NEDD8-204ENST00000526430 OR4M2Q8NGB6 313 aa9.19□□□□□ -0.94
NEDD8-204ENST00000526430 SPRYD4Q8WW59 207 aaPredicted RBP9.19□□□□□ -0.94
NEDD8-204ENST00000526430 C4orf36Q96KX1 117 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms