RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 UGT2B11O75310 529 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 NDUFB8O95169 186 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 OR5AL1P0C617 328 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 HKR1P10072 659 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 SLC2A2P11168 524 aaPredicted RBP3.71□□□□□ -1.82
CD44-213ENST00000525209 SCGB1A1P11684 91 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 GABRG2P18507 467 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 SDC1P18827 310 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 WT1P19544 449 aaPredicted RBP3.71□□□□□ -1.82
CD44-213ENST00000525209 ELK4P28324 431 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 HTR1EP28566 365 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 CCKARP32238 428 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 SOX3P41225 446 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 BTDP43251 543 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 RPL5P46777 297 aaKnown RBP3.71□□□□□ -1.82
CD44-213ENST00000525209 TTPAP49638 278 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 SULT1A1P50225 295 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 SULT1A2P50226 295 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 UBE2E1P51965 193 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 LIM2P55344 173 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 RPL32P62910 135 aaKnown RBP3.71□□□□□ -1.82
CD44-213ENST00000525209 PSPHP78330 225 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 FOXF2Q12947 444 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 NFATC4Q14934 902 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 HLA-DRB5Q30154 266 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 TPTE2P1Q5T6R2 138 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 OTUD1Q5VV17 481 aaPredicted RBP3.71□□□□□ -1.82
CD44-213ENST00000525209 SPSB3Q6PJ21 355 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 EPGNQ6UW88 154 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 TMEM150AQ86TG1 271 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 APLFQ8IW19 511 aaPredicted RBP3.71□□□□□ -1.82
CD44-213ENST00000525209 DAW1Q8N136 415 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 LRRC25Q8N386 305 aaPredicted RBP3.71□□□□□ -1.82
CD44-213ENST00000525209 TMEM199Q8N511 208 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 SPICQ8N5J4 248 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 ZNF557Q8N988 423 aaPredicted RBP3.71□□□□□ -1.82
CD44-213ENST00000525209 TMEM161BQ8NDZ6 487 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 PIFOQ8TCI5 191 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 TMEM234Q8WY98 164 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 FGGYQ96C11 551 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 MED8Q96G25 268 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 WBP1Q96G27 269 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 SFRP2Q96HF1 295 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 UBE2E2Q96LR5 201 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 DOK1Q99704 481 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 KCTD14Q9BQ13 255 aaPredicted RBP3.71□□□□□ -1.82
CD44-213ENST00000525209 SLC19A3Q9BZV2 496 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 NMUR2Q9GZQ4 415 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 ALX4Q9H161 411 aaPredicted RBP3.71□□□□□ -1.82
CD44-213ENST00000525209 MAP1LC3AQ9H492 121 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 NT5DC2Q9H857 520 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 ELOVL5Q9NYP7 299 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 TAS2R13Q9NYV9 303 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 ZNF224Q9NZL3 707 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 VPREB3Q9UKI3 123 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 PPP2R2CQ9Y2T4 447 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 OR51B2Q9Y5P1 312 aa3.71□□□□□ -1.82
CD44-213ENST00000525209 DOT1LQ8TEK3 1739 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 ISPDA4D126 451 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 CLDN24A6NM45 220 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 SYCE1LA8MT33 242 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 OR11H12B2RN74 326 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 PATE3B3GLJ2 98 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 ZNF587BE7ETH6 402 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 LOC110117498-PIK3R3F6TDL0 507 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 C15orf65H3BRN8 121 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 M0R1B8 84 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 TAAR5O14804 337 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 ARPC5O15511 151 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 RAD51CO43502 376 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 FAM189A1O60320 539 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 PTTG1O95997 202 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 HAND1O96004 215 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 ARG1P05089 322 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 TFPTP0C1Z6 253 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 ICAM2P13598 275 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 BCL3P20749 454 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 SLC2A5P22732 501 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 CALML3P27482 149 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 GPR183P32249 361 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 FABP6P51161 128 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 DLX1P56177 255 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 TCL1AP56279 114 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 PPP1CBP62140 327 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 RPS27AP62979 156 aaKnown RBP3.7□□□□□ -1.82
CD44-213ENST00000525209 SLC25A11Q02978 314 aaKnown RBP3.7□□□□□ -1.82
CD44-213ENST00000525209 APOFQ13790 326 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 OR1Q1Q15612 314 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 ZNF726P1Q15940 193 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 C4orf26Q17RF5 130 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 LRRC26Q2I0M4 334 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 DEFB115Q30KQ5 88 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 GPRC6AQ5T6X5 926 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 ZNF626Q68DY1 528 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 C8orf82Q6P1X6 216 aaPredicted RBP3.7□□□□□ -1.82
CD44-213ENST00000525209 APOOLQ6UXV4 268 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 TFAP2EQ6VUC0 442 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 CYHR1Q6ZMK1 362 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 Q6ZTK2 550 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 ARRDC1Q8N5I2 433 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms